| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309832
Identifier: 94309832
GI number: 94309832
Start: 971289
End: 972014
Strand: Reverse
Name: 94309832
Synonym: Rmet_0887
Alternate gene names: NA
Gene position: 972014-971289 (Counterclockwise)
Preceding gene: 94309833
Following gene: 94309829
Centisome position: 24.75
GC content: 62.26
Gene sequence:
>726_bases ATGGCAGGCGGTTATGGCGTGCGCAGCCCAGGACCTTGTGTCCAGTGCCTGGCGAGACCGATGACCACACCTTTCTGGCC GGGCCGGGAAAGGTGTGCGTCATTGGCATCTCGCGATGCATTTGCGGCCCGGTTATTCAAACGACAAAAAATGGAATCGT TCCTCGTCTCCACAGGCATCGTCGCGCTCGCTGAAATGGGCGACAAGACGCAGTTGCTGTCGCTCGTCCTGGCCGCGCGC TACCGCAAGCCAATTCCCATCATTCTGGGCATCCTGATCGCAACGCTGGTCAATCACGGCTTTGCCGGCGCGCTCGGCGG CTGGATCACGGGCATGGTCGGCGTAGACCTGCTGCGCTGGATTCTTGGCCTCGGGTTCATTGCGATGGCCGGCTGGATGC TGATTCCGGACAAGCTCGACGACGCCGAGGAAGCCAAACCCGTCAAGGGTGCGCTCGGCATCCTGGGCACCACGATCATC GCGTTCTTCTTCGCCGAGATGGGCGACAAGACGCAGATCGCCACCGTGGCGCTAGCCGCACGCTTCCATGGCGAAGTGAT TGCAGTGGTGGCCGGCACGACGTTCGGCATGATGCTCGCCAATGCCCCGGCCGTCCTGCTGGGCGACCGTTTCGCCAATA AGATGCCAATCGCCCTGGTGCACAAGATCGCCGCTGCGATCTTCCTGGTGCTGGGTCTGTTGGCGCTGTTCAACGTCGGC GGCTGA
Upstream 100 bases:
>100_bases GACCTTCCATTGGGGAGTAGCCGCCCTGATCTCACCGCGCCGCGCAATGCGGCACCCGGAAGACAGGGGCGTACGTCAAC AGACTTGACCAAATGCCGAC
Downstream 100 bases:
>100_bases GAATCCTGACTCCCTTCGTCCGCTCAGCGGGAGTGGGGAGCAGCAATTCAGATCCAGAAATAAAAAAACGGGGCCTAAGC CCCGCTCAAACCCTCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAGGYGVRSPGPCVQCLARPMTTPFWPGRERCASLASRDAFAARLFKRQKMESFLVSTGIVALAEMGDKTQLLSLVLAAR YRKPIPIILGILIATLVNHGFAGALGGWITGMVGVDLLRWILGLGFIAMAGWMLIPDKLDDAEEAKPVKGALGILGTTII AFFFAEMGDKTQIATVALAARFHGEVIAVVAGTTFGMMLANAPAVLLGDRFANKMPIALVHKIAAAIFLVLGLLALFNVG G
Sequences:
>Translated_241_residues MAGGYGVRSPGPCVQCLARPMTTPFWPGRERCASLASRDAFAARLFKRQKMESFLVSTGIVALAEMGDKTQLLSLVLAAR YRKPIPIILGILIATLVNHGFAGALGGWITGMVGVDLLRWILGLGFIAMAGWMLIPDKLDDAEEAKPVKGALGILGTTII AFFFAEMGDKTQIATVALAARFHGEVIAVVAGTTFGMMLANAPAVLLGDRFANKMPIALVHKIAAAIFLVLGLLALFNVG G >Mature_240_residues AGGYGVRSPGPCVQCLARPMTTPFWPGRERCASLASRDAFAARLFKRQKMESFLVSTGIVALAEMGDKTQLLSLVLAARY RKPIPIILGILIATLVNHGFAGALGGWITGMVGVDLLRWILGLGFIAMAGWMLIPDKLDDAEEAKPVKGALGILGTTIIA FFFAEMGDKTQIATVALAARFHGEVIAVVAGTTFGMMLANAPAVLLGDRFANKMPIALVHKIAAAIFLVLGLLALFNVGG
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25454; Mature: 25323
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGYGVRSPGPCVQCLARPMTTPFWPGRERCASLASRDAFAARLFKRQKMESFLVSTGI CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALAEMGDKTQLLSLVLAARYRKPIPIILGILIATLVNHGFAGALGGWITGMVGVDLLRW HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ILGLGFIAMAGWMLIPDKLDDAEEAKPVKGALGILGTTIIAFFFAEMGDKTQIATVALAA HHHHHHHHHHCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RFHGEVIAVVAGTTFGMMLANAPAVLLGDRFANKMPIALVHKIAAAIFLVLGLLALFNVG HHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure AGGYGVRSPGPCVQCLARPMTTPFWPGRERCASLASRDAFAARLFKRQKMESFLVSTGI CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALAEMGDKTQLLSLVLAARYRKPIPIILGILIATLVNHGFAGALGGWITGMVGVDLLRW HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ILGLGFIAMAGWMLIPDKLDDAEEAKPVKGALGILGTTIIAFFFAEMGDKTQIATVALAA HHHHHHHHHHCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RFHGEVIAVVAGTTFGMMLANAPAVLLGDRFANKMPIALVHKIAAAIFLVLGLLALFNVG HHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA