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The map label for this gene is frc [H]

Identifier: 94309764

GI number: 94309764

Start: 891615

End: 893066

Strand: Direct

Name: frc [H]

Synonym: Rmet_0819

Alternate gene names: 94309764

Gene position: 891615-893066 (Clockwise)

Preceding gene: 94309756

Following gene: 94309769

Centisome position: 22.7

GC content: 68.39

Gene sequence:

>1452_bases
ATGAACTCCGCTTCCTTCGCCACCGTTCCCCCCCAAACTGCCCCCGATGCCTTGGCCGCGCTCTGGCGCGAGGCCGGGAT
GCCCCCGGAAGCACTTGGGCATCTGACGCTGACCGGCGCCGATCCGGTTCTCCCATCCAGCTTCGCCATTGGCACTGCGG
CCCAGACCAGCCTGGGCGCGTCGGCGCTGGCTGCCGCCGCGTTGTGGGCGCAGCGGACCGGCAACTGGCAGGGCGTCGCG
GTCGATATGCGCCATGCCATGGCCGAGTTTCGCAGCGAGCGCTATCTGCGCGTCAAAGGTGGCGCCGCGCCCGAGCTATG
GGACAAGATCGCGGGGCTGTACCCGTGCGGCGATGGCCGCTGGGTCAGGCTGCATACGAATTTTCCGCATCATCGGGATG
GCGTGCTGAAGCTTCTGCATTGCGCGCACGACAAGGATGCCGTGCGCGCTGCGCTGTCCAAGTGGAAGGCCGAGGACTTC
GAAGCGGCGGCCTCGGACGCCGGCATGGTCGTGGCGGCGATGCGGACCTATGACGAATGGCAGGCGCACCCGCAGGCTCA
GGCGTTGCGGGGGCTCCCGCCGGTCATCATCGAACGGATCGGCGATGCGCCGCCGATGCCGTTGCCGGCATTTGCACCCC
AGGCCGAAATCAATGTCGATGCCAGGCCGTTGTCCGGCGTGCGCGTGCTCGACTTCACGCGCATCATCGCCGGCCCGGTG
GCGGGGCGGACATTGGCCGCCCACGGCGCCGATGTGTTGCTGGTCACGGCTGCACACCTGCCGTCGATTCCGCCGCTCGT
TATCGATACCGGGCGTGGCAAACGCTCCTGCCAGCTCGATCTGCGTGACGCGGATGACAAGCGCGCGCTGCACAAGCTGC
TGCACGGCGCCGATGTCGTGGTGCAGGGGTATCGCCCGAACGGGCTGGCGGAGCTCGGGGTCGGTGCCGAAGCCGCGGCG
CGCGCGCGTCCGGGCATCGTCTATGTGTCGCTATCTGCTTATGGCCATGTCGGGCCGTGGGCGGGCAAGCGTGGTTTCGA
TTCGCTCGTGCAGACGGCCACCGGCTTCAATGACGACGAAGCCCGTGCAGCGGGCTCCACCGAGCCGAAGCCGCTCCCGG
CACAGGTGCTGGATCATGCCGCGGGGTATCTGCTGGCCTTCGGCGCGATGGCGGCGCTGCACCGCCGTGCGGTGGAAGGC
GGAAGCTGGCATGTGCGCGTGTCGCTGGCCCAGGTCGGGCAATGGTTGCGCGGGCTAGGTCGCCTGCCGGATGGCTTCAG
CGTGCCCGACCAGCACATCGACGAGATTTCGGACCTGCTCGAAGTGCAGGAGTCGGGCTTCGGCGAGTTGACCGTGGTGC
GTCACGCGGCCCAGTTATCGGCAACGCCGGCATATTGGGCGTTGCCTTCCGAACCACTCGGTACCCACGCGGCCGAGTGG
CTGCCGCGCTAG

Upstream 100 bases:

>100_bases
GAATCCACCAGATATCAGGGTCGTCATCGTGCGGTAGACCTCGGGCCGTGGTGCGCAATCGTCGCACAGTCCGGGGCTTG
CCGCTGCTGGAATACAAGCC

Downstream 100 bases:

>100_bases
TAGAGGTTATTGCGCAGGCGGTCCGGGAGTTCGCGATCGTAGGTGGCGGCGTCGATCGCATTCTGGCTCAGCGTTGCGAC
GATCGTGCCATTGCTCGGCA

Product: putative acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MNSASFATVPPQTAPDALAALWREAGMPPEALGHLTLTGADPVLPSSFAIGTAAQTSLGASALAAAALWAQRTGNWQGVA
VDMRHAMAEFRSERYLRVKGGAAPELWDKIAGLYPCGDGRWVRLHTNFPHHRDGVLKLLHCAHDKDAVRAALSKWKAEDF
EAAASDAGMVVAAMRTYDEWQAHPQAQALRGLPPVIIERIGDAPPMPLPAFAPQAEINVDARPLSGVRVLDFTRIIAGPV
AGRTLAAHGADVLLVTAAHLPSIPPLVIDTGRGKRSCQLDLRDADDKRALHKLLHGADVVVQGYRPNGLAELGVGAEAAA
RARPGIVYVSLSAYGHVGPWAGKRGFDSLVQTATGFNDDEARAAGSTEPKPLPAQVLDHAAGYLLAFGAMAALHRRAVEG
GSWHVRVSLAQVGQWLRGLGRLPDGFSVPDQHIDEISDLLEVQESGFGELTVVRHAAQLSATPAYWALPSEPLGTHAAEW
LPR

Sequences:

>Translated_483_residues
MNSASFATVPPQTAPDALAALWREAGMPPEALGHLTLTGADPVLPSSFAIGTAAQTSLGASALAAAALWAQRTGNWQGVA
VDMRHAMAEFRSERYLRVKGGAAPELWDKIAGLYPCGDGRWVRLHTNFPHHRDGVLKLLHCAHDKDAVRAALSKWKAEDF
EAAASDAGMVVAAMRTYDEWQAHPQAQALRGLPPVIIERIGDAPPMPLPAFAPQAEINVDARPLSGVRVLDFTRIIAGPV
AGRTLAAHGADVLLVTAAHLPSIPPLVIDTGRGKRSCQLDLRDADDKRALHKLLHGADVVVQGYRPNGLAELGVGAEAAA
RARPGIVYVSLSAYGHVGPWAGKRGFDSLVQTATGFNDDEARAAGSTEPKPLPAQVLDHAAGYLLAFGAMAALHRRAVEG
GSWHVRVSLAQVGQWLRGLGRLPDGFSVPDQHIDEISDLLEVQESGFGELTVVRHAAQLSATPAYWALPSEPLGTHAAEW
LPR
>Mature_483_residues
MNSASFATVPPQTAPDALAALWREAGMPPEALGHLTLTGADPVLPSSFAIGTAAQTSLGASALAAAALWAQRTGNWQGVA
VDMRHAMAEFRSERYLRVKGGAAPELWDKIAGLYPCGDGRWVRLHTNFPHHRDGVLKLLHCAHDKDAVRAALSKWKAEDF
EAAASDAGMVVAAMRTYDEWQAHPQAQALRGLPPVIIERIGDAPPMPLPAFAPQAEINVDARPLSGVRVLDFTRIIAGPV
AGRTLAAHGADVLLVTAAHLPSIPPLVIDTGRGKRSCQLDLRDADDKRALHKLLHGADVVVQGYRPNGLAELGVGAEAAA
RARPGIVYVSLSAYGHVGPWAGKRGFDSLVQTATGFNDDEARAAGSTEPKPLPAQVLDHAAGYLLAFGAMAALHRRAVEG
GSWHVRVSLAQVGQWLRGLGRLPDGFSVPDQHIDEISDLLEVQESGFGELTVVRHAAQLSATPAYWALPSEPLGTHAAEW
LPR

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI300863124, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI300863126, Length=159, Percent_Identity=30.8176100628931, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI87082093, Length=203, Percent_Identity=26.1083743842365, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788717, Length=147, Percent_Identity=27.891156462585, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI32564160, Length=190, Percent_Identity=30, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115535051, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648431, Length=196, Percent_Identity=33.6734693877551, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24585488, Length=200, Percent_Identity=29.5, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 51309; Mature: 51309

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSASFATVPPQTAPDALAALWREAGMPPEALGHLTLTGADPVLPSSFAIGTAAQTSLGA
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCCCCHHHHHCCH
SALAAAALWAQRTGNWQGVAVDMRHAMAEFRSERYLRVKGGAAPELWDKIAGLYPCGDGR
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCEEECCCCC
WVRLHTNFPHHRDGVLKLLHCAHDKDAVRAALSKWKAEDFEAAASDAGMVVAAMRTYDEW
EEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHH
QAHPQAQALRGLPPVIIERIGDAPPMPLPAFAPQAEINVDARPLSGVRVLDFTRIIAGPV
HCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
AGRTLAAHGADVLLVTAAHLPSIPPLVIDTGRGKRSCQLDLRDADDKRALHKLLHGADVV
CCCEEHHCCCCEEEEEEHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEE
VQGYRPNGLAELGVGAEAAARARPGIVYVSLSAYGHVGPWAGKRGFDSLVQTATGFNDDE
EECCCCCCCHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCH
ARAAGSTEPKPLPAQVLDHAAGYLLAFGAMAALHRRAVEGGSWHVRVSLAQVGQWLRGLG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHC
RLPDGFSVPDQHIDEISDLLEVQESGFGELTVVRHAAQLSATPAYWALPSEPLGTHAAEW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCHHHH
LPR
CCC
>Mature Secondary Structure
MNSASFATVPPQTAPDALAALWREAGMPPEALGHLTLTGADPVLPSSFAIGTAAQTSLGA
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCCCCHHHHHCCH
SALAAAALWAQRTGNWQGVAVDMRHAMAEFRSERYLRVKGGAAPELWDKIAGLYPCGDGR
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCEEECCCCC
WVRLHTNFPHHRDGVLKLLHCAHDKDAVRAALSKWKAEDFEAAASDAGMVVAAMRTYDEW
EEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHH
QAHPQAQALRGLPPVIIERIGDAPPMPLPAFAPQAEINVDARPLSGVRVLDFTRIIAGPV
HCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
AGRTLAAHGADVLLVTAAHLPSIPPLVIDTGRGKRSCQLDLRDADDKRALHKLLHGADVV
CCCEEHHCCCCEEEEEEHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEE
VQGYRPNGLAELGVGAEAAARARPGIVYVSLSAYGHVGPWAGKRGFDSLVQTATGFNDDE
EECCCCCCCHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCH
ARAAGSTEPKPLPAQVLDHAAGYLLAFGAMAALHRRAVEGGSWHVRVSLAQVGQWLRGLG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHC
RLPDGFSVPDQHIDEISDLLEVQESGFGELTVVRHAAQLSATPAYWALPSEPLGTHAAEW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCHHHH
LPR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA