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The map label for this gene is splB

Identifier: 94309687

GI number: 94309687

Start: 820480

End: 821565

Strand: Reverse

Name: splB

Synonym: Rmet_0742

Alternate gene names: NA

Gene position: 821565-820480 (Counterclockwise)

Preceding gene: 94309688

Following gene: 94309685

Centisome position: 20.92

GC content: 62.34

Gene sequence:

>1086_bases
ATGACGTCACTACCCGATGGCTTCCGCAAGGGAAGAGGCGCGCTGTCGAACACGGAATCGCGTTTCGACAGCCTGTCCCG
AGAGGCGGATGCGGCCATGCTTGCCGATCTGGAGGCCTTGCACGGCGAGTCTCCCGCGCCACGGACGACGATCGCGATCG
AGCCGGCAAGGACGATCATCTCGCGCAACCAGTCGCCCGATGTTCCGTTCGACCAGTCGATCAACATGTACCGGGGTTGC
GAGCACGGATGCTCGTACTGTTTTGCGCGACCGAATCATGCCTACCTGGGCCTGTCGCCTGGTCTCGACTTCGAGACAAA
GCTGTTCGCCAAGCCAAATGCCGCTACGCTGCTCGAGCAGGAACTCCGCAAGAAACACTACAAGCCGAGCGTCATCGCGC
TCGGCACCAACACCGATCCGTACCAGCCGATCGAGCGGAAATTCCAGCTCACGCGCGGCATTCTGGAGGTGCTGGAACGC
TTCCAGCACCCGGTGGCCATCACGACCAAATCGTTTCTGGTGTCGCGAGATATCGACATCCTTGCCCGTATGGCCCGGAA
TGGGCTGGCGCGCGTATTCATGTCCGTCACGACGCTCGATGCCGATATCGCCAGAAAGATGGAGCCGCGCGCCAGCACAC
CAGCCAAACGGATCGAAGGCATCCGGTTGCTGGCCGAAGCCGGCGTGCCGGCCGGGGTGCTCTTTGCCCCGGTGATACCG
GCGCTGACCGACTACGACCTGGAAAACGTGCTGAAGGCCTGCAGCGAAGTTGGGGCAACGTCGGCCGGCTTCGTCATGCT
GCGCCTGCCGCTAGAGGTTCACGGCATCTTCATCGAATGGCTGGAGGAGCATTTCCCCGGCCGCAAGCAGCATGTGCTGA
GCATCATCGAGAACATGCGCAACGGGAAGCACAACGACGCGACATTCACGAGCCGGATGCGCGGGACGGGCATTTTTGCC
GAGCTGGTCCGCAAGCGTTTCGAGATCGCATGCCGGAGGCTTGGGCTCAATCAAGAGCGCCACCCGCTGCGCACCGATCT
GTTCCGCGTGCCGCCCGAGGATTCGCCGCAGGGCAGCCTTTTCTGA

Upstream 100 bases:

>100_bases
GGGCGCGCATTCCATCAGGGCGCTGATCAGGGCACTGGTATCTCGCCAGCAATACTGTATATTTATACAGTATTGGAGAT
TGTACGAGTCAAGAGCCCCC

Downstream 100 bases:

>100_bases
GCCAGCAGGCCAGGAGCCGTCAGCCTGGTTGGCTGCGCTCCTTCTCGTCCACCGCGATCGCCAGCGTCTCCTTGATCTCT
TCCATTACCACGTAGCTTTT

Product: DNA repair photolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTIISRNQSPDVPFDQSINMYRGC
EHGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLER
FQHPVAITTKSFLVSRDIDILARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIP
ALTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMRNGKHNDATFTSRMRGTGIFA
ELVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSLF

Sequences:

>Translated_361_residues
MTSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTIISRNQSPDVPFDQSINMYRGC
EHGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLER
FQHPVAITTKSFLVSRDIDILARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIP
ALTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMRNGKHNDATFTSRMRGTGIFA
ELVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSLF
>Mature_360_residues
TSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTIISRNQSPDVPFDQSINMYRGCE
HGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLERF
QHPVAITTKSFLVSRDIDILARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIPA
LTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMRNGKHNDATFTSRMRGTGIFAE
LVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40293; Mature: 40162

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTII
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH
SRNQSPDVPFDQSINMYRGCEHGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQ
HCCCCCCCCCCCCCCHHHCHHHHHHHEEECCCCEEEECCCCCCCCCEEECCCCHHHHHHH
ELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLERFQHPVAITTKSFLVSRDIDI
HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCHHH
LARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ALTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMR
HHCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NGKHNDATFTSRMRGTGIFAELVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSL
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCC
F
C
>Mature Secondary Structure 
TSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTII
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH
SRNQSPDVPFDQSINMYRGCEHGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQ
HCCCCCCCCCCCCCCHHHCHHHHHHHEEECCCCEEEECCCCCCCCCEEECCCCHHHHHHH
ELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLERFQHPVAITTKSFLVSRDIDI
HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCHHH
LARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ALTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMR
HHCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NGKHNDATFTSRMRGTGIFAELVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSL
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]