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The map label for this gene is 94309570

Identifier: 94309570

GI number: 94309570

Start: 685965

End: 686480

Strand: Reverse

Name: 94309570

Synonym: Rmet_0625

Alternate gene names: NA

Gene position: 686480-685965 (Counterclockwise)

Preceding gene: 94309583

Following gene: 94309569

Centisome position: 17.48

GC content: 60.66

Gene sequence:

>516_bases
ATGGCCGAAAGTTTTCAGAATGAAGTGCCCAAGGCACGGGTCAACATCAAGCTCGACCTGCATACGGGCGGCGCGCAGAA
GAAAGTCGAGCTACCCCTGAAGCTGCTGGTGATGGGCGACTACAGCAACGGCCAGGAAACACGAGCCCTCGCTGAGCGCG
AGAAGGTGTCGATCAACAAGAACAACTTCAATTCCGTCCTCGCCGACTTCAACCCGAAGGCTCGGATCGCGGTCGAGAGC
ACCCTCGCACGGGATGGATCGGAGCTGCCGGTCGATCTCGACTTCAAGTCCATGGATGACTTCAAGCCGGAAGTGGTCGC
GAGCCGCGTGCCCGAGCTGCGGGCCCTGATGGCCGCACGCAACCTGCTGCGCGACCTCAAGTCGAATCTGCTCGACAACG
CCATGTTTCGTCGCGAGCTCGAAAAGATCCTTAAGGACCCTGGTCTGTCCGAGCGCCTGCGGGCCGATCTGCAGAAGATC
AGCGAGGCTGCACCGGCCTCCCAGTCTGCCCAGTAA

Upstream 100 bases:

>100_bases
CCACTACCCTGCCCGCCGGATCGTCATTCCCTGGTTGCACCAACCTTCAGAGTTAAAGATCGCTTAATTGCGAGTTTTTG
CGAATTAAACAGGATTGCAT

Downstream 100 bases:

>100_bases
CCCGACTTCTTGAGGATTGAGCCCCATGGCCCAGCATGAAATGTCCCCCCGCGCCAACAGCGAAACCGACACCGTCGTCC
TGGACGCGCCGGGCAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Protein ImpB; Type VI Secretion Protein VasQ; T6ss S; Type VI Secretion System Protein; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB; Cytoplasmic Protein SciH

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAESFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGQETRALAEREKVSINKNNFNSVLADFNPKARIAVES
TLARDGSELPVDLDFKSMDDFKPEVVASRVPELRALMAARNLLRDLKSNLLDNAMFRRELEKILKDPGLSERLRADLQKI
SEAAPASQSAQ

Sequences:

>Translated_171_residues
MAESFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGQETRALAEREKVSINKNNFNSVLADFNPKARIAVES
TLARDGSELPVDLDFKSMDDFKPEVVASRVPELRALMAARNLLRDLKSNLLDNAMFRRELEKILKDPGLSERLRADLQKI
SEAAPASQSAQ
>Mature_170_residues
AESFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGQETRALAEREKVSINKNNFNSVLADFNPKARIAVEST
LARDGSELPVDLDFKSMDDFKPEVVASRVPELRALMAARNLLRDLKSNLLDNAMFRRELEKILKDPGLSERLRADLQKIS
EAAPASQSAQ

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19059; Mature: 18928

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGQETRALAEREKVSINK
CCCCHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCC
NNFNSVLADFNPKARIAVESTLARDGSELPVDLDFKSMDDFKPEVVASRVPELRALMAAR
CCHHHHHHCCCCCCEEEHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
NLLRDLKSNLLDNAMFRRELEKILKDPGLSERLRADLQKISEAAPASQSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AESFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGQETRALAEREKVSINK
CCCHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCC
NNFNSVLADFNPKARIAVESTLARDGSELPVDLDFKSMDDFKPEVVASRVPELRALMAAR
CCHHHHHHCCCCCCEEEHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
NLLRDLKSNLLDNAMFRRELEKILKDPGLSERLRADLQKISEAAPASQSAQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA