| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309569
Identifier: 94309569
GI number: 94309569
Start: 684362
End: 685939
Strand: Reverse
Name: 94309569
Synonym: Rmet_0624
Alternate gene names: NA
Gene position: 685939-684362 (Counterclockwise)
Preceding gene: 94309570
Following gene: 335055499
Centisome position: 17.46
GC content: 59.57
Gene sequence:
>1578_bases ATGGCCCAGCATGAAATGTCCCCCCGCGCCAACAGCGAAACCGACACCGTCGTCCTGGACGCGCCGGGCAAGAGCGTCTA CGAGTCCCTGTGCGAGAAAATCAACCTGACCCCGGTCAAGGCGACGCGCCCGATGGAGTCGTTCCAGAGCGCCGATGCAC TATCCGAATCGTCGCTGGATGAGCGTGTCGCCCAGGCGATGACCGTGTTCCTGAAAATGATCCAGGACTCATCGCAACAG GTCGATCGTCTCGACAAGAGCCTGCTCGACTTCCATATCGCGCATCTGGACCAGCAGATCAGCCAGCAGCTGGACGCGAT CATGCACCATGAGACGTTCCAGCAGATCGAATCAGCGTGGCGTGGCCTGAAGTTCCTGGTTGACCGGACGGACTTCCGCA AGAACGTCAAGATCGAAGTGCTGGATGTGTCCAAGGACGCGCTGCGCCAGGATTTCGAGGACACCCCAGAGCTCATCCAG AGCGGGTTGTACCTGCACACCTACATTCAGGAGTACGACACACCGGGCGGTGAACCCGTCGGCTCGATCATCTCCAACTA CGAGTTCGACCGCAGCCAGCAGGATATTGTCTTGCTGCGCAATATCTCCAAGGTGTCCGCCGCCGCCCATATGCCGTTTA TCGGCTCGGTGTCGCCAAAGTTCTTTGGCAAGGACTCGATGGACGAGGTAGCCAGCATCCGCGATATCGGCAATTACTTC GATCGCGCCGAGTATCTGAAGTGGAAGAGCTTCCGCGATTCGGATGACGCCCGCTATATCGGCCTGACCCTACCGCGCTT CCTCGCGCGCTTGCCCTATGGCCCGGATACGGTACCGGTACGCGCCTTCAACTACACCGAAGCCGTCAAGGGGCCGGATC ACAGCCGCTATCTGTGGGGCAACGCCTCGTTCGCCTTTGCCGTGAACATGGTGCAGAGCTTCATCAAGAACGGCTGGTGC GTGCAGATCCGTGGCCCGCAGGCCGGTGGTCTCGTCGAGGATCTGCCGATCCACCTGTATGACCTGGGCACCGGCAACCA GGCCAAGATCCCGACCGAGGTGCTGATCCCGGAGACGCGCGAGTTCGAGTTTGCCAATCTCGGCTTCATCCCGCTGTCGT ACTACAAGAACCACGACTTCGCGTGCTTCTTCTCGGCCCACTCGGCCCAGAAGCCAGCGCTCTACGACACCAAGGAGGCC ACGGCCAATAGCCGCGTCAATGCACGCCTGCCGTACATTTTCCTGCTGTCACGCATCGCCCACTACCTGAAGCTGATTCA GCGCGAGAACATCGGTACCACCAAGGATCGGCGCGTGCTGGAGTTGGAGCTGAACACCTGGATCAAGACGCTCGTCACCG AGATGACAGATCCGGGTGATGAACTTCAGGCCTCGCACCCGCTGCGCGAAGCCAAGGTAATCGTCGAGGACATCGAAGAC AACCCGGGCTTCTTCCGCGTCAAGCTCTTCATCGTGCCGCACTTTCAGATCGAAGGGATGGACATCAATCTGTCGCTGGT CTCGCAGATGCCCAAGGCGAAAACTGATCGACTGCTGTCGGCTTCGACGGCGATTTAG
Upstream 100 bases:
>100_bases GGTCTGTCCGAGCGCCTGCGGGCCGATCTGCAGAAGATCAGCGAGGCTGCACCGGCCTCCCAGTCTGCCCAGTAACCCGA CTTCTTGAGGATTGAGCCCC
Downstream 100 bases:
>100_bases ACAGATCGCAGACATGTCGTAGGTCTTGCCGCACGGTAGCTATGAATCACCGTGCGGCGTCTCCCAAGCGAAAAGGGTTG TTTCCGCGTACCAGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MAQHEMSPRANSETDTVVLDAPGKSVYESLCEKINLTPVKATRPMESFQSADALSESSLDERVAQAMTVFLKMIQDSSQQ VDRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAWRGLKFLVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQ SGLYLHTYIQEYDTPGGEPVGSIISNYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYF DRAEYLKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWGNASFAFAVNMVQSFIKNGWC VQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETREFEFANLGFIPLSYYKNHDFACFFSAHSAQKPALYDTKEA TANSRVNARLPYIFLLSRIAHYLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIED NPGFFRVKLFIVPHFQIEGMDINLSLVSQMPKAKTDRLLSASTAI
Sequences:
>Translated_525_residues MAQHEMSPRANSETDTVVLDAPGKSVYESLCEKINLTPVKATRPMESFQSADALSESSLDERVAQAMTVFLKMIQDSSQQ VDRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAWRGLKFLVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQ SGLYLHTYIQEYDTPGGEPVGSIISNYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYF DRAEYLKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWGNASFAFAVNMVQSFIKNGWC VQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETREFEFANLGFIPLSYYKNHDFACFFSAHSAQKPALYDTKEA TANSRVNARLPYIFLLSRIAHYLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIED NPGFFRVKLFIVPHFQIEGMDINLSLVSQMPKAKTDRLLSASTAI >Mature_524_residues AQHEMSPRANSETDTVVLDAPGKSVYESLCEKINLTPVKATRPMESFQSADALSESSLDERVAQAMTVFLKMIQDSSQQV DRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAWRGLKFLVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQS GLYLHTYIQEYDTPGGEPVGSIISNYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYFD RAEYLKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWGNASFAFAVNMVQSFIKNGWCV QIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETREFEFANLGFIPLSYYKNHDFACFFSAHSAQKPALYDTKEAT ANSRVNARLPYIFLLSRIAHYLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIEDN PGFFRVKLFIVPHFQIEGMDINLSLVSQMPKAKTDRLLSASTAI
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59561; Mature: 59430
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHEMSPRANSETDTVVLDAPGKSVYESLCEKINLTPVKATRPMESFQSADALSESSLD CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH ERVAQAMTVFLKMIQDSSQQVDRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAW HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLKFLVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQSGLYLHTYIQEYDTPGGEPV HHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCHH GSIISNYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYF HHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DRAEYLKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWG HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEC NASFAFAVNMVQSFIKNGWCVQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETR CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCEEEEECCCCCCCCCCCEEECCCCC EFEFANLGFIPLSYYKNHDFACFFSAHSAQKPALYDTKEATANSRVNARLPYIFLLSRIA CCCCCCCCCEEEHCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH HYLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIED HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC NPGFFRVKLFIVPHFQIEGMDINLSLVSQMPKAKTDRLLSASTAI CCCEEEEEEEEEECEEEECEEEEHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure AQHEMSPRANSETDTVVLDAPGKSVYESLCEKINLTPVKATRPMESFQSADALSESSLD CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH ERVAQAMTVFLKMIQDSSQQVDRLDKSLLDFHIAHLDQQISQQLDAIMHHETFQQIESAW HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLKFLVDRTDFRKNVKIEVLDVSKDALRQDFEDTPELIQSGLYLHTYIQEYDTPGGEPV HHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCCCHH GSIISNYEFDRSQQDIVLLRNISKVSAAAHMPFIGSVSPKFFGKDSMDEVASIRDIGNYF HHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DRAEYLKWKSFRDSDDARYIGLTLPRFLARLPYGPDTVPVRAFNYTEAVKGPDHSRYLWG HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEC NASFAFAVNMVQSFIKNGWCVQIRGPQAGGLVEDLPIHLYDLGTGNQAKIPTEVLIPETR CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCEEEEECCCCCCCCCCCEEECCCCC EFEFANLGFIPLSYYKNHDFACFFSAHSAQKPALYDTKEATANSRVNARLPYIFLLSRIA CCCCCCCCCEEEHCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH HYLKLIQRENIGTTKDRRVLELELNTWIKTLVTEMTDPGDELQASHPLREAKVIVEDIED HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCC NPGFFRVKLFIVPHFQIEGMDINLSLVSQMPKAKTDRLLSASTAI CCCEEEEEEEEEECEEEECEEEEHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA