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The map label for this gene is 94309485

Identifier: 94309485

GI number: 94309485

Start: 575083

End: 575826

Strand: Direct

Name: 94309485

Synonym: Rmet_0540

Alternate gene names: NA

Gene position: 575083-575826 (Clockwise)

Preceding gene: 94309484

Following gene: 94309486

Centisome position: 14.64

GC content: 65.86

Gene sequence:

>744_bases
ATGCCCACGCCTACCAAGCCCACGACCCGGTCCGCTACCGCATCCCGCGCCAGGTCGGCCAAGCGAGGCGCCGACGAGGT
GGTACGTCCTCCGTTGCAGTCGCGTAGCGAAAAGAGCCTGGAGAAGATGGTGGCGGCCTGCCGCGCACTGGCCGAGGAGC
GCGGCAATCTCGACGACATTTCGTTGAACGAGACCGTTGCCAGGGCGGGCACGTCGATTGGCGCGTTCTATGGGCGTTTC
AAGGACAAGGAGGCCTTTCTCGGCTATGTGCTCGAAGTGGCGTTGCGCGAGGCGGAGGACGTCATGCAACGCTCGATCGA
CGAGGAGCCTGTCTGGCAGACGGGCCCCGCGCAGGCGATCGTCGAGCGCATCATCGGCAGCTACGTCAGCCAGTTTCGGC
TGAATCGTGGTTTGTTCAGGGGATTCCTGCGGCACTACTCGGCGCGTGACGCGCGCGACAACCCGATGCGCGATGCCAAC
CGGCGGATCTACGGGCTGGTCGTGCCGTCGCTCGCGGCGCAGTTGGGCGATCGGCCCAAGGACACAGCGGAGTTCGAAGT
CCGCGCCGCGCTGCAGTTCATGGTGGGCACGCTCGCCAACATCCTGCTCAACGATCCGGGGCCGCTGCATCTCGATGACG
ATGCTCTGGCGCTCCACCTGGATCGCATGATGGTCCGCTATCTCGGATTGCCTGAGGCAGTCGCGCCTGTCGCCTCCGCG
ACGCCTCGCCGCAGCAAGCGCTAG

Upstream 100 bases:

>100_bases
TTGGGGCGAGGGTGATGAACGGAGGCCAGTTCGTCGTGTTTGGTACAGGGTGAATTGCCGCATAATCCACTCTGTTCCCG
AACGGTCTTCACCCACTGCC

Downstream 100 bases:

>100_bases
CCTCCGGTCATCGCGCGTCTCGCGTTAGGCGTTTCTCGAGCGAAACCCTATCAGTATTTGCCCTCTGCTGTCTGAACCGA
AAAATAGCACTACCGTTCGT

Product: putative regulatory protein, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MPTPTKPTTRSATASRARSAKRGADEVVRPPLQSRSEKSLEKMVAACRALAEERGNLDDISLNETVARAGTSIGAFYGRF
KDKEAFLGYVLEVALREAEDVMQRSIDEEPVWQTGPAQAIVERIIGSYVSQFRLNRGLFRGFLRHYSARDARDNPMRDAN
RRIYGLVVPSLAAQLGDRPKDTAEFEVRAALQFMVGTLANILLNDPGPLHLDDDALALHLDRMMVRYLGLPEAVAPVASA
TPRRSKR

Sequences:

>Translated_247_residues
MPTPTKPTTRSATASRARSAKRGADEVVRPPLQSRSEKSLEKMVAACRALAEERGNLDDISLNETVARAGTSIGAFYGRF
KDKEAFLGYVLEVALREAEDVMQRSIDEEPVWQTGPAQAIVERIIGSYVSQFRLNRGLFRGFLRHYSARDARDNPMRDAN
RRIYGLVVPSLAAQLGDRPKDTAEFEVRAALQFMVGTLANILLNDPGPLHLDDDALALHLDRMMVRYLGLPEAVAPVASA
TPRRSKR
>Mature_246_residues
PTPTKPTTRSATASRARSAKRGADEVVRPPLQSRSEKSLEKMVAACRALAEERGNLDDISLNETVARAGTSIGAFYGRFK
DKEAFLGYVLEVALREAEDVMQRSIDEEPVWQTGPAQAIVERIIGSYVSQFRLNRGLFRGFLRHYSARDARDNPMRDANR
RIYGLVVPSLAAQLGDRPKDTAEFEVRAALQFMVGTLANILLNDPGPLHLDDDALALHLDRMMVRYLGLPEAVAPVASAT
PRRSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27377; Mature: 27245

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPTKPTTRSATASRARSAKRGADEVVRPPLQSRSEKSLEKMVAACRALAEERGNLDDI
CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SLNETVARAGTSIGAFYGRFKDKEAFLGYVLEVALREAEDVMQRSIDEEPVWQTGPAQAI
CHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VERIIGSYVSQFRLNRGLFRGFLRHYSARDARDNPMRDANRRIYGLVVPSLAAQLGDRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCC
DTAEFEVRAALQFMVGTLANILLNDPGPLHLDDDALALHLDRMMVRYLGLPEAVAPVASA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHC
TPRRSKR
CCCCCCC
>Mature Secondary Structure 
PTPTKPTTRSATASRARSAKRGADEVVRPPLQSRSEKSLEKMVAACRALAEERGNLDDI
CCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SLNETVARAGTSIGAFYGRFKDKEAFLGYVLEVALREAEDVMQRSIDEEPVWQTGPAQAI
CHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VERIIGSYVSQFRLNRGLFRGFLRHYSARDARDNPMRDANRRIYGLVVPSLAAQLGDRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCC
DTAEFEVRAALQFMVGTLANILLNDPGPLHLDDDALALHLDRMMVRYLGLPEAVAPVASA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHC
TPRRSKR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA