Click here to switch to the map view.

The map label for this gene is yybO [H]

Identifier: 94309486

GI number: 94309486

Start: 575999

End: 577333

Strand: Direct

Name: yybO [H]

Synonym: Rmet_0541

Alternate gene names: 94309486

Gene position: 575999-577333 (Clockwise)

Preceding gene: 94309485

Following gene: 94309488

Centisome position: 14.66

GC content: 64.34

Gene sequence:

>1335_bases
ATGGCAGAAGCGTTGACATCGTCACGAGGCAATGTGTTGCCGCAAGAGGCTGAGGAAAGCGGCCCGTCCAATGTCTACCA
GCCACGCAAGGCATGGACCATCGCCATCTGGCTGACTGCCTTCTCCGCCATCAACTTCCTCGACAAGGTCGTGCTGGGCA
TGTTGGCCGTGCCGATCATGGAGGATTTTCATCTGACGCCCACGAGCTTCGGCGTGATCGCCGGCAGCTTCTTCTGGCTG
TTCTCGCTGTCAGCGGTCGTGGTCGGCTTTATCGGCAACCGGGTGGCTTCGCGATGGATCCTGCTGTGCATGGCGTTCAT
CTGGTCGGTGGTCCAGCTTCCGGTCGCCTTCGCGACGAAGTCATGGGTGCTGCTGGCCTCGCGGGTGGCGCTGGGCGCTG
GCGAGGGACCGAGCTTTCCGGTTTCGGCACATGCCTTGTTCAAGTGGTTCCCGCATGACAAGCGCAATCTGCCGGTGACG
CTGATCAACCAGGGCGCGGTCATTGGGCTGCTGCTGGCGGGCCTGCTTGTGCCCTATGTTTCGCACAACTGGGGATGGCG
CACCAACTTCATCATGCTGGCGATTGCGTCGGCGGTGTGGGGGCTGGGCTGGCTTTGTTTCGGCCGCGAGGGCACGCTGA
GCTCGGCCGCCGCCGATGACGGGGCCCCGCGCGCTGATACCTTGCCGCGACGTGTGCCTTACCGCAAGCTGCTGACCGAC
CCCACGATCCTGTCTGCCTGTTTCGTCGGCTTCACAGCGTACTGGAGCCTTGCGCTGGTGCTGACCTGGATTCCTTCATA
TCTGGAGCAGGCGCTCGGCTTCGATCGCATCAGCGCGGGCAAAGTGTTCGCCCTGCAGGTTGCCGCGGGCATCCCCATCA
GCATGACGCTGAGCTGGCTCTCGCAGCGCATGTTGCAGCGTGGCGCATCCACGCGTGTGGCCCGCGTGCTGTTCGGCGCC
GTTTGCGTCGGCGTGGGCGGGCTGGGCCTGCTGGTGCCTGCGTTCGTGCCGATGCCGACGCCTTATCGGCTGGTATTGCT
CACCGCTGCCGCCACGCTGCCGAACATGGTGTTCTCGTTCGGCCCGGCGATCCTGGCCGAGATTACGCCCGACGCGCAGC
GCAGCGCCATCGTCGCGCTCAATGTCGCGATTTCCACCTGTGCGGGCGCCATCGCGCCGATCACGATGGGATGGTTCGTG
CAGGCGCATCCGGGTGACCTTGCCCATGGATACGAACTTGGCTTTGCACTGGGCGGCGCGGTGATGCTGACGGGATTCGT
GATGAGCTGGCTGGGTCAGCATCCCGAGCGCTCGCTGCGACGGCTGCAAGGCTAA

Upstream 100 bases:

>100_bases
TGAACCGAAAAATAGCACTACCGTTCGTAATCCGGTCGGATGGCACATGCCTTCCGGCGCGCCCCCGGTGCGCGCGCGAG
CACGCAAGGAGACCACGAAT

Downstream 100 bases:

>100_bases
CGAGCAGAGGCCGGCTTGCCGGCGAATCTCTGGCACGAAAAAAAACCCGGCAAATACTTGCCGGGTTTTTTCACTTGCAC
GGACTCAGTGCGCGCTGTCG

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MAEALTSSRGNVLPQEAEESGPSNVYQPRKAWTIAIWLTAFSAINFLDKVVLGMLAVPIMEDFHLTPTSFGVIAGSFFWL
FSLSAVVVGFIGNRVASRWILLCMAFIWSVVQLPVAFATKSWVLLASRVALGAGEGPSFPVSAHALFKWFPHDKRNLPVT
LINQGAVIGLLLAGLLVPYVSHNWGWRTNFIMLAIASAVWGLGWLCFGREGTLSSAAADDGAPRADTLPRRVPYRKLLTD
PTILSACFVGFTAYWSLALVLTWIPSYLEQALGFDRISAGKVFALQVAAGIPISMTLSWLSQRMLQRGASTRVARVLFGA
VCVGVGGLGLLVPAFVPMPTPYRLVLLTAAATLPNMVFSFGPAILAEITPDAQRSAIVALNVAISTCAGAIAPITMGWFV
QAHPGDLAHGYELGFALGGAVMLTGFVMSWLGQHPERSLRRLQG

Sequences:

>Translated_444_residues
MAEALTSSRGNVLPQEAEESGPSNVYQPRKAWTIAIWLTAFSAINFLDKVVLGMLAVPIMEDFHLTPTSFGVIAGSFFWL
FSLSAVVVGFIGNRVASRWILLCMAFIWSVVQLPVAFATKSWVLLASRVALGAGEGPSFPVSAHALFKWFPHDKRNLPVT
LINQGAVIGLLLAGLLVPYVSHNWGWRTNFIMLAIASAVWGLGWLCFGREGTLSSAAADDGAPRADTLPRRVPYRKLLTD
PTILSACFVGFTAYWSLALVLTWIPSYLEQALGFDRISAGKVFALQVAAGIPISMTLSWLSQRMLQRGASTRVARVLFGA
VCVGVGGLGLLVPAFVPMPTPYRLVLLTAAATLPNMVFSFGPAILAEITPDAQRSAIVALNVAISTCAGAIAPITMGWFV
QAHPGDLAHGYELGFALGGAVMLTGFVMSWLGQHPERSLRRLQG
>Mature_443_residues
AEALTSSRGNVLPQEAEESGPSNVYQPRKAWTIAIWLTAFSAINFLDKVVLGMLAVPIMEDFHLTPTSFGVIAGSFFWLF
SLSAVVVGFIGNRVASRWILLCMAFIWSVVQLPVAFATKSWVLLASRVALGAGEGPSFPVSAHALFKWFPHDKRNLPVTL
INQGAVIGLLLAGLLVPYVSHNWGWRTNFIMLAIASAVWGLGWLCFGREGTLSSAAADDGAPRADTLPRRVPYRKLLTDP
TILSACFVGFTAYWSLALVLTWIPSYLEQALGFDRISAGKVFALQVAAGIPISMTLSWLSQRMLQRGASTRVARVLFGAV
CVGVGGLGLLVPAFVPMPTPYRLVLLTAAATLPNMVFSFGPAILAEITPDAQRSAIVALNVAISTCAGAIAPITMGWFVQ
AHPGDLAHGYELGFALGGAVMLTGFVMSWLGQHPERSLRRLQG

Specific function: Intake Of Galactonate Into The Cell. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI21322234, Length=231, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI154350196, Length=280, Percent_Identity=24.6428571428571, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI9966811, Length=243, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI87082320, Length=416, Percent_Identity=25, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI2367379, Length=416, Percent_Identity=23.0769230769231, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789515, Length=302, Percent_Identity=22.8476821192053, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1789152, Length=392, Percent_Identity=21.6836734693878, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71997452, Length=465, Percent_Identity=22.3655913978495, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17542878, Length=301, Percent_Identity=23.9202657807309, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25145964, Length=271, Percent_Identity=23.2472324723247, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24654215, Length=351, Percent_Identity=24.2165242165242, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19922400, Length=352, Percent_Identity=24.1477272727273, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24580790, Length=346, Percent_Identity=22.8323699421965, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648416, Length=391, Percent_Identity=21.9948849104859, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356189, Length=391, Percent_Identity=21.9948849104859, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573708, Length=356, Percent_Identity=21.6292134831461, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28573707, Length=356, Percent_Identity=21.6292134831461, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI62484226, Length=353, Percent_Identity=24.929178470255, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45550460, Length=277, Percent_Identity=23.1046931407942, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24655255, Length=277, Percent_Identity=23.1046931407942, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47686; Mature: 47554

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEALTSSRGNVLPQEAEESGPSNVYQPRKAWTIAIWLTAFSAINFLDKVVLGMLAVPIM
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EDFHLTPTSFGVIAGSFFWLFSLSAVVVGFIGNRVASRWILLCMAFIWSVVQLPVAFATK
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVLLASRVALGAGEGPSFPVSAHALFKWFPHDKRNLPVTLINQGAVIGLLLAGLLVPYV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
SHNWGWRTNFIMLAIASAVWGLGWLCFGREGTLSSAAADDGAPRADTLPRRVPYRKLLTD
CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
PTILSACFVGFTAYWSLALVLTWIPSYLEQALGFDRISAGKVFALQVAAGIPISMTLSWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHH
SQRMLQRGASTRVARVLFGAVCVGVGGLGLLVPAFVPMPTPYRLVLLTAAATLPNMVFSF
HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GPAILAEITPDAQRSAIVALNVAISTCAGAIAPITMGWFVQAHPGDLAHGYELGFALGGA
CCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHH
VMLTGFVMSWLGQHPERSLRRLQG
HHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
AEALTSSRGNVLPQEAEESGPSNVYQPRKAWTIAIWLTAFSAINFLDKVVLGMLAVPIM
CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EDFHLTPTSFGVIAGSFFWLFSLSAVVVGFIGNRVASRWILLCMAFIWSVVQLPVAFATK
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVLLASRVALGAGEGPSFPVSAHALFKWFPHDKRNLPVTLINQGAVIGLLLAGLLVPYV
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
SHNWGWRTNFIMLAIASAVWGLGWLCFGREGTLSSAAADDGAPRADTLPRRVPYRKLLTD
CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
PTILSACFVGFTAYWSLALVLTWIPSYLEQALGFDRISAGKVFALQVAAGIPISMTLSWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHH
SQRMLQRGASTRVARVLFGAVCVGVGGLGLLVPAFVPMPTPYRLVLLTAAATLPNMVFSF
HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GPAILAEITPDAQRSAIVALNVAISTCAGAIAPITMGWFVQAHPGDLAHGYELGFALGGA
CCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHH
VMLTGFVMSWLGQHPERSLRRLQG
HHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]