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The map label for this gene is 94309475

Identifier: 94309475

GI number: 94309475

Start: 565730

End: 566524

Strand: Direct

Name: 94309475

Synonym: Rmet_0530

Alternate gene names: NA

Gene position: 565730-566524 (Clockwise)

Preceding gene: 94309473

Following gene: 335055497

Centisome position: 14.4

GC content: 68.05

Gene sequence:

>795_bases
ATGTCTATCGAACCCACTCAAGTCAGTCGCGAGGCCGAACTCGGCGCATTTCTGCGCACCCACCGAGAGCGGCTGACGCC
AAGCGACGTCGGCCTGCCGCCGGGCCGCAGGCGCCGCACACCGGGATTGCGGCGCGAGGAAGTTGCGCAGCTTTCGGGAT
TGAGTGCCACATGGATCACGTGGCTGGAGCAGGGGAGACCGGTGGCGATGTCCGTGCGCGCGCTGGGCAGTCTGGCCGAG
GCCCTGCGACTGTCTCGCGCTGAACGCGCCTATCTGTTCGCGCTGGCTGGCAAGCCCGAACCGCGCCAGGATGCCGAGCC
CGCCGTGCCCGTCGCACTGCTTGCGAGCGTTCAGGCAATCTCGGGGCCTGCCTATCTGCTGGATCGCCAATGGACCGCCC
GGGCATGGAATGCAGCGGCCGCCGACCTGTTCGTCGGCTGGCTCGATGCTGCGTCCGGAGAGCGGAACCTGCTGCGAGCG
ATGTTCCTGCCGACGGCGTTGCAGGCGTTGGTGGAGGATTGGCCGCACCGCGCCGCACGGCTCGTGGCCGAGTTTCGTGT
CCACAGCTTGCGTCATGCCGAAGATCCGCCGACACGCGCACTGATCGAGCGGCTCATGGAAGACAGCCCCGCGTTCGCGG
CGGCCTGGCGTTCGCAGGACGTCGACGAGCGCCAAGGCGGCCGGCGCGGGTTTCATCACCCGATGCGCGGCCTGGTCTAC
TTCGAGCAACTCACGCTGGTACCCCCGGCTGCACCGGGGATGATGCTGGTGATGCTGCTGCCGGAAACACCCTGA

Upstream 100 bases:

>100_bases
TGGCGATGGGGATTGCCCGGGCCCGGGGGTTCACGTACTGTAGATGCGGTCTTTTCCCGGTACAAGTCACAGATTTATCC
TGGTATAAGCACCACCAGCC

Downstream 100 bases:

>100_bases
TTCGGCGCGATTCGCCGCGAGTCGCCCTGCATCGCGCGACGCGCGGGCTTACTTCGGCTGCATGCGGATTGCACCATCCA
GGCGGATCACTTCGCCATTC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSIEPTQVSREAELGAFLRTHRERLTPSDVGLPPGRRRRTPGLRREEVAQLSGLSATWITWLEQGRPVAMSVRALGSLAE
ALRLSRAERAYLFALAGKPEPRQDAEPAVPVALLASVQAISGPAYLLDRQWTARAWNAAAADLFVGWLDAASGERNLLRA
MFLPTALQALVEDWPHRAARLVAEFRVHSLRHAEDPPTRALIERLMEDSPAFAAAWRSQDVDERQGGRRGFHHPMRGLVY
FEQLTLVPPAAPGMMLVMLLPETP

Sequences:

>Translated_264_residues
MSIEPTQVSREAELGAFLRTHRERLTPSDVGLPPGRRRRTPGLRREEVAQLSGLSATWITWLEQGRPVAMSVRALGSLAE
ALRLSRAERAYLFALAGKPEPRQDAEPAVPVALLASVQAISGPAYLLDRQWTARAWNAAAADLFVGWLDAASGERNLLRA
MFLPTALQALVEDWPHRAARLVAEFRVHSLRHAEDPPTRALIERLMEDSPAFAAAWRSQDVDERQGGRRGFHHPMRGLVY
FEQLTLVPPAAPGMMLVMLLPETP
>Mature_263_residues
SIEPTQVSREAELGAFLRTHRERLTPSDVGLPPGRRRRTPGLRREEVAQLSGLSATWITWLEQGRPVAMSVRALGSLAEA
LRLSRAERAYLFALAGKPEPRQDAEPAVPVALLASVQAISGPAYLLDRQWTARAWNAAAADLFVGWLDAASGERNLLRAM
FLPTALQALVEDWPHRAARLVAEFRVHSLRHAEDPPTRALIERLMEDSPAFAAAWRSQDVDERQGGRRGFHHPMRGLVYF
EQLTLVPPAAPGMMLVMLLPETP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29297; Mature: 29166

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEPTQVSREAELGAFLRTHRERLTPSDVGLPPGRRRRTPGLRREEVAQLSGLSATWIT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
WLEQGRPVAMSVRALGSLAEALRLSRAERAYLFALAGKPEPRQDAEPAVPVALLASVQAI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
SGPAYLLDRQWTARAWNAAAADLFVGWLDAASGERNLLRAMFLPTALQALVEDWPHRAAR
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAEFRVHSLRHAEDPPTRALIERLMEDSPAFAAAWRSQDVDERQGGRRGFHHPMRGLVY
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
FEQLTLVPPAAPGMMLVMLLPETP
HHHHHCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
SIEPTQVSREAELGAFLRTHRERLTPSDVGLPPGRRRRTPGLRREEVAQLSGLSATWIT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
WLEQGRPVAMSVRALGSLAEALRLSRAERAYLFALAGKPEPRQDAEPAVPVALLASVQAI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
SGPAYLLDRQWTARAWNAAAADLFVGWLDAASGERNLLRAMFLPTALQALVEDWPHRAAR
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAEFRVHSLRHAEDPPTRALIERLMEDSPAFAAAWRSQDVDERQGGRRGFHHPMRGLVY
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
FEQLTLVPPAAPGMMLVMLLPETP
HHHHHCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA