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The map label for this gene is glpQ [H]

Identifier: 94309370

GI number: 94309370

Start: 449431

End: 450609

Strand: Reverse

Name: glpQ [H]

Synonym: Rmet_0425

Alternate gene names: 94309370

Gene position: 450609-449431 (Counterclockwise)

Preceding gene: 94309371

Following gene: 94309369

Centisome position: 11.47

GC content: 65.9

Gene sequence:

>1179_bases
ATGCATCATCCGTTCATCACCCGATTCACGCTTGCCGCGCTGACCGCTGGCCTCATTGCCGGCTGCGCGGCGCCGCCTCG
TGCGCCCACGTCCACTGCTGCGCGGGAGGCGCCATCCACGGCATACGCTACCACCAGCGCTGCGCCGAAGCCCGTGCTGA
TCATCGGCCATCGCGGCGCTAGCGCGCTGCGGCCAGAACACACGCTGGCGTCCTATCAGAAGGCGATCGACGACGGCGCC
GACATCATCGAGCCCGATCTCGTGGCAACGAAGGACGGCGTACTGGTGGCGCGGCACGAAAACGACATCACGGGTACCAC
CAATGTGGCCGAGATGCCGGAGTTCGCCGACCGCAAGCGTGTGAAGGTCATCGACGGCGAGCGGCTGACCGGCTGGTTCA
CCGAGGACTTCACGCTGGCCGAACTGAAGACGCTGCGCGCCCGGGAGCGGATTCCGAAGCTGCGTCCCGCCAATGCAAAG
CTCAATGACCAGTTCGAGATCCCGACATTCGACGAAATCCTGAAGCTCGCCGAGCTGGCCGCCATGAAGCGTGGACGCCC
GGTTGGGATCTATCCCGAACTCAAGCATCCCACTTACTTCCGCGGTATCGGTCTGCCGCTGGAGGAGCGACTCGTGACTG
CGCTGCAGGGCAGCGCCTATGCGAAGACCGTGCCGGTGTATGTGCAGTCGTTCGAAGCCGCGCCGTTGCGCACCGTCAAG
CGATTGCTGGGTAACTCGATGCCCAACGTGATGATCGTCCAGCTTATCGGCAATCCGCGCAGCCGTCCCGCGGACTGGCG
ACTGGCAGGTGATACGCGCACGTACGCCGACATGTTGAAGCCGATCGGCCTTCGCGAAGTGGCCACCTACGCCAACGGCA
TCGGCCCCGAGAAGAACAGCGTGATCCCGCGCGACGCCAGCGGCAATCTCGCCTCGCCGACCGCGCTACTCGCCAACGCC
CACGCGGCGGGCCTGGTAGTGCACCCTTACACATTCCGGCCCGAGAACGCGTTCCTGCCGAAATCGCTGCGTGCGCCCGG
TGACGATGCCACACGCAACCCGGCCGGCATGATCAGCGAGATCCAGACCTTCGCAGCCGCGGGTGTCGACGGCGTCTTCA
CCGACGACCCGGCGCTGGGTCGCCGCGCCGTGGATCCCCCCGCCAACGGCGGCCATTAA

Upstream 100 bases:

>100_bases
ATCGATGCCGATCGATTGCCATTTTCAGAGCAGCGCCTACGGATGCCCGCTACAGCCGGCGTTTACAATCGTCGTTCGTG
ACACCGTCAGGACTGCACCG

Downstream 100 bases:

>100_bases
GCACGCTGGCCGCGCTACACTTGCGGCCAATTTCGCTTCTCCATCGCACCCACCATGATCGGACGTATCGCTGGCACCCT
GCTCGAAAAGAATCCCCCGC

Product: putative glycerophosphoryl diester phosphodiesterase, periplasmic protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MHHPFITRFTLAALTAGLIAGCAAPPRAPTSTAAREAPSTAYATTSAAPKPVLIIGHRGASALRPEHTLASYQKAIDDGA
DIIEPDLVATKDGVLVARHENDITGTTNVAEMPEFADRKRVKVIDGERLTGWFTEDFTLAELKTLRARERIPKLRPANAK
LNDQFEIPTFDEILKLAELAAMKRGRPVGIYPELKHPTYFRGIGLPLEERLVTALQGSAYAKTVPVYVQSFEAAPLRTVK
RLLGNSMPNVMIVQLIGNPRSRPADWRLAGDTRTYADMLKPIGLREVATYANGIGPEKNSVIPRDASGNLASPTALLANA
HAAGLVVHPYTFRPENAFLPKSLRAPGDDATRNPAGMISEIQTFAAAGVDGVFTDDPALGRRAVDPPANGGH

Sequences:

>Translated_392_residues
MHHPFITRFTLAALTAGLIAGCAAPPRAPTSTAAREAPSTAYATTSAAPKPVLIIGHRGASALRPEHTLASYQKAIDDGA
DIIEPDLVATKDGVLVARHENDITGTTNVAEMPEFADRKRVKVIDGERLTGWFTEDFTLAELKTLRARERIPKLRPANAK
LNDQFEIPTFDEILKLAELAAMKRGRPVGIYPELKHPTYFRGIGLPLEERLVTALQGSAYAKTVPVYVQSFEAAPLRTVK
RLLGNSMPNVMIVQLIGNPRSRPADWRLAGDTRTYADMLKPIGLREVATYANGIGPEKNSVIPRDASGNLASPTALLANA
HAAGLVVHPYTFRPENAFLPKSLRAPGDDATRNPAGMISEIQTFAAAGVDGVFTDDPALGRRAVDPPANGGH
>Mature_392_residues
MHHPFITRFTLAALTAGLIAGCAAPPRAPTSTAAREAPSTAYATTSAAPKPVLIIGHRGASALRPEHTLASYQKAIDDGA
DIIEPDLVATKDGVLVARHENDITGTTNVAEMPEFADRKRVKVIDGERLTGWFTEDFTLAELKTLRARERIPKLRPANAK
LNDQFEIPTFDEILKLAELAAMKRGRPVGIYPELKHPTYFRGIGLPLEERLVTALQGSAYAKTVPVYVQSFEAAPLRTVK
RLLGNSMPNVMIVQLIGNPRSRPADWRLAGDTRTYADMLKPIGLREVATYANGIGPEKNSVIPRDASGNLASPTALLANA
HAAGLVVHPYTFRPENAFLPKSLRAPGDDATRNPAGMISEIQTFAAAGVDGVFTDDPALGRRAVDPPANGGH

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=343, Percent_Identity=31.4868804664723, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 42151; Mature: 42151

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHPFITRFTLAALTAGLIAGCAAPPRAPTSTAAREAPSTAYATTSAAPKPVLIIGHRGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEECCCCCCCEEEEECCCC
SALRPEHTLASYQKAIDDGADIIEPDLVATKDGVLVARHENDITGTTNVAEMPEFADRKR
CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHCHHHHCCCC
VKVIDGERLTGWFTEDFTLAELKTLRARERIPKLRPANAKLNDQFEIPTFDEILKLAELA
EEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AMKRGRPVGIYPELKHPTYFRGIGLPLEERLVTALQGSAYAKTVPVYVQSFEAAPLRTVK
HHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH
RLLGNSMPNVMIVQLIGNPRSRPADWRLAGDTRTYADMLKPIGLREVATYANGIGPEKNS
HHHCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCC
VIPRDASGNLASPTALLANAHAAGLVVHPYTFRPENAFLPKSLRAPGDDATRNPAGMISE
CCCCCCCCCCCCCHHHHHCCCCCCEEEECEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH
IQTFAAAGVDGVFTDDPALGRRAVDPPANGGH
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHHPFITRFTLAALTAGLIAGCAAPPRAPTSTAAREAPSTAYATTSAAPKPVLIIGHRGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEECCCCCCCEEEEECCCC
SALRPEHTLASYQKAIDDGADIIEPDLVATKDGVLVARHENDITGTTNVAEMPEFADRKR
CCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHCHHHHCCCC
VKVIDGERLTGWFTEDFTLAELKTLRARERIPKLRPANAKLNDQFEIPTFDEILKLAELA
EEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AMKRGRPVGIYPELKHPTYFRGIGLPLEERLVTALQGSAYAKTVPVYVQSFEAAPLRTVK
HHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH
RLLGNSMPNVMIVQLIGNPRSRPADWRLAGDTRTYADMLKPIGLREVATYANGIGPEKNS
HHHCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCC
VIPRDASGNLASPTALLANAHAAGLVVHPYTFRPENAFLPKSLRAPGDDATRNPAGMISE
CCCCCCCCCCCCCHHHHHCCCCCCEEEECEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH
IQTFAAAGVDGVFTDDPALGRRAVDPPANGGH
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]