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The map label for this gene is oprB

Identifier: 94309297

GI number: 94309297

Start: 371486

End: 372964

Strand: Direct

Name: oprB

Synonym: Rmet_0352

Alternate gene names: NA

Gene position: 371486-372964 (Clockwise)

Preceding gene: 94309291

Following gene: 94309300

Centisome position: 9.46

GC content: 64.57

Gene sequence:

>1479_bases
ATGGGGCTTTGGCTAAGCTGCCCGCCAATCCATTGGATGCCTGCATGCGCGCATCCACTGCCCCCAATTCCTATGTCGCG
TTCTTGTCCGCCAGCCGCTCCGCAGCGGTTGCGCCCGAGCTTTGCCCGCCGCTTTGCCGTCCCGTTTGCCGCCTTGCTGG
TGGCGGGCGGGCTTGCTTTGCCGTGGGCGGCGCAAGCGCAGGAAGCCACCGGGCCAGGGCAGGAAGCCGTGTCCGATGTG
GAAAGCCCGTTCGCCATCCATGGGCAGACCACGTATATCTGGCAGCGCAAGCCGTCTTTCGGCGCGGGGTACTCCGGCGA
GAACAGCCTGACGCCCGATCGTGCCAAGAGCTATTCGTTCACGGCCACGCTCGACCTGGGATTGCGGCTCTGGCAGGGCG
CCGAGTTCCATTTCAATCCGGAGGTGGCCCAGGGCGTGCCGTTCTCCGAACTGCATGGCGTGGGTGGCCCTTCCAATGGC
GAACTGGCCAAGACGGCCAGCACCAATCCGAAGTTCTACCGCGCACGGGCCTTCATTCGTCAGACGTGGGGGCTGGGAGG
CGGCGAGGAAAAGCTCGAGGCCGATTTCAACCAGTTCGCCCGCACCGTCGACAAGCAACGCGTGGTGCTGACCGCCGGCA
ACTTTAGCGTGCTCGATGTCTTCGATCAGAACCCCTACGGGTCCGATCCACGCACGCAGTTCATGAACTGGTCGTTCCTG
ACGCACGGTTCGTTCGACTACGCGGCGGATGCGCGAGGCTACAACTGGGGGGCTTCGGTCGAGTACATCGGCGATGGCTG
GTCGGCGCGTTTCGGCCGTTTCCTGCAGCCGCTCGAATCAAATGGCCAGGAGCTCGACACGCGCATGTTCGAGCACTACG
GCGACGTGCTGGAACTCGAAAAGCGCTACCAGATCGGTGGCCGCCCTGGCCAGGCCCGGCTGCTGCTGTGGCGTAACAAG
GCGAAGATGGGGGCGTTCAACGACGCCATCGCTTTCGGACTGGCCAACAACGTGACGCCGGACGTGGCCGACGTGCGCCG
CGAACACGCGAAGGTGGGCGTGGGGCTTGCGTTCCTGCAGGAGGTCAACGATTCACTGGGCCTGTTCCTGCGGGCCAACT
GGTCCGACGACAAGACCGAAACCTACGCGTTCACGGAAATCGGCCGGCAGGTGGCGTGGGGCGGCACGCTCAAGGGAACG
GCGTGGGGTCGTCCCAAAGACGAGGTGGGGCTGGGGATGGCGATCAACATGCTTGGGTCCAACCATCGCAACTATCTGGC
GGCGGGTGGTCTGGGCGCGTTCCTGGGGGATGGGGCGCTCAACTACGGCCCCGAGCAGGTATTCGAGATCTACTACAGCT
TCGCGGTCTGGAAGACGCTGAGCCTGAGCCCGGACTTCCAGTACATGCGGAACCCGGGCTACAACCGGGATCGCGGGCCC
GCCAAGTTCATCGGCATCCGGGCCCACGCGGAGTTTTGA

Upstream 100 bases:

>100_bases
ATTAATTTTCGAATTAATTAATTCAAGATCGGTTACAAAGTTGAGTGAGAGCGCAGCGCGTTGGATATGCTGCATTGCAA
CAATTCACGGTAGACATGTC

Downstream 100 bases:

>100_bases
GTCAGTGCGGTCCTACTGCCGCGCATTGCGCCGGTTGTCCGGCCACGGCGTGTTGTAGTTGGTGCGGAACGGATTGATGT
CCAGCCCGCCGCGGCGCGTG

Product: carbohydrate-selective porin

Products: NA

Alternate protein names: OmpA-Like Transmembrane Domain-Containing Protein; Carbohydrate-Selective Porin Oprb; Carbohydrate-Selective Porin OprB Family; OmpA-Like Transmembrane Domain Protein; OmpA Domain-Containing Protein; Outer Membrane Protein A-Like; Carbohydrate-Selective Porin

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MGLWLSCPPIHWMPACAHPLPPIPMSRSCPPAAPQRLRPSFARRFAVPFAALLVAGGLALPWAAQAQEATGPGQEAVSDV
ESPFAIHGQTTYIWQRKPSFGAGYSGENSLTPDRAKSYSFTATLDLGLRLWQGAEFHFNPEVAQGVPFSELHGVGGPSNG
ELAKTASTNPKFYRARAFIRQTWGLGGGEEKLEADFNQFARTVDKQRVVLTAGNFSVLDVFDQNPYGSDPRTQFMNWSFL
THGSFDYAADARGYNWGASVEYIGDGWSARFGRFLQPLESNGQELDTRMFEHYGDVLELEKRYQIGGRPGQARLLLWRNK
AKMGAFNDAIAFGLANNVTPDVADVRREHAKVGVGLAFLQEVNDSLGLFLRANWSDDKTETYAFTEIGRQVAWGGTLKGT
AWGRPKDEVGLGMAINMLGSNHRNYLAAGGLGAFLGDGALNYGPEQVFEIYYSFAVWKTLSLSPDFQYMRNPGYNRDRGP
AKFIGIRAHAEF

Sequences:

>Translated_492_residues
MGLWLSCPPIHWMPACAHPLPPIPMSRSCPPAAPQRLRPSFARRFAVPFAALLVAGGLALPWAAQAQEATGPGQEAVSDV
ESPFAIHGQTTYIWQRKPSFGAGYSGENSLTPDRAKSYSFTATLDLGLRLWQGAEFHFNPEVAQGVPFSELHGVGGPSNG
ELAKTASTNPKFYRARAFIRQTWGLGGGEEKLEADFNQFARTVDKQRVVLTAGNFSVLDVFDQNPYGSDPRTQFMNWSFL
THGSFDYAADARGYNWGASVEYIGDGWSARFGRFLQPLESNGQELDTRMFEHYGDVLELEKRYQIGGRPGQARLLLWRNK
AKMGAFNDAIAFGLANNVTPDVADVRREHAKVGVGLAFLQEVNDSLGLFLRANWSDDKTETYAFTEIGRQVAWGGTLKGT
AWGRPKDEVGLGMAINMLGSNHRNYLAAGGLGAFLGDGALNYGPEQVFEIYYSFAVWKTLSLSPDFQYMRNPGYNRDRGP
AKFIGIRAHAEF
>Mature_491_residues
GLWLSCPPIHWMPACAHPLPPIPMSRSCPPAAPQRLRPSFARRFAVPFAALLVAGGLALPWAAQAQEATGPGQEAVSDVE
SPFAIHGQTTYIWQRKPSFGAGYSGENSLTPDRAKSYSFTATLDLGLRLWQGAEFHFNPEVAQGVPFSELHGVGGPSNGE
LAKTASTNPKFYRARAFIRQTWGLGGGEEKLEADFNQFARTVDKQRVVLTAGNFSVLDVFDQNPYGSDPRTQFMNWSFLT
HGSFDYAADARGYNWGASVEYIGDGWSARFGRFLQPLESNGQELDTRMFEHYGDVLELEKRYQIGGRPGQARLLLWRNKA
KMGAFNDAIAFGLANNVTPDVADVRREHAKVGVGLAFLQEVNDSLGLFLRANWSDDKTETYAFTEIGRQVAWGGTLKGTA
WGRPKDEVGLGMAINMLGSNHRNYLAAGGLGAFLGDGALNYGPEQVFEIYYSFAVWKTLSLSPDFQYMRNPGYNRDRGPA
KFIGIRAHAEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54215; Mature: 54084

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLWLSCPPIHWMPACAHPLPPIPMSRSCPPAAPQRLRPSFARRFAVPFAALLVAGGLAL
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCC
PWAAQAQEATGPGQEAVSDVESPFAIHGQTTYIWQRKPSFGAGYSGENSLTPDRAKSYSF
CCCCCCCCCCCCCHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHCCEEE
TATLDLGLRLWQGAEFHFNPEVAQGVPFSELHGVGGPSNGELAKTASTNPKFYRARAFIR
EEEEECCHHHHCCCCEEECCHHHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
QTWGLGGGEEKLEADFNQFARTVDKQRVVLTAGNFSVLDVFDQNPYGSDPRTQFMNWSFL
HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCHHHHEEEEEE
THGSFDYAADARGYNWGASVEYIGDGWSARFGRFLQPLESNGQELDTRMFEHYGDVLELE
ECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH
KRYQIGGRPGQARLLLWRNKAKMGAFNDAIAFGLANNVTPDVADVRREHAKVGVGLAFLQ
HHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EVNDSLGLFLRANWSDDKTETYAFTEIGRQVAWGGTLKGTAWGRPKDEVGLGMAINMLGS
HHCCCCEEEEEECCCCCCCCEEHHHHHCCCEECCCCCCCCCCCCCHHHCCCCEEEEECCC
NHRNYLAAGGLGAFLGDGALNYGPEQVFEIYYSFAVWKTLSLSPDFQYMRNPGYNRDRGP
CCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCCCCCC
AKFIGIRAHAEF
CEEEEEEEECCC
>Mature Secondary Structure 
GLWLSCPPIHWMPACAHPLPPIPMSRSCPPAAPQRLRPSFARRFAVPFAALLVAGGLAL
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCC
PWAAQAQEATGPGQEAVSDVESPFAIHGQTTYIWQRKPSFGAGYSGENSLTPDRAKSYSF
CCCCCCCCCCCCCHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHCCEEE
TATLDLGLRLWQGAEFHFNPEVAQGVPFSELHGVGGPSNGELAKTASTNPKFYRARAFIR
EEEEECCHHHHCCCCEEECCHHHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
QTWGLGGGEEKLEADFNQFARTVDKQRVVLTAGNFSVLDVFDQNPYGSDPRTQFMNWSFL
HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCHHHHEEEEEE
THGSFDYAADARGYNWGASVEYIGDGWSARFGRFLQPLESNGQELDTRMFEHYGDVLELE
ECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHH
KRYQIGGRPGQARLLLWRNKAKMGAFNDAIAFGLANNVTPDVADVRREHAKVGVGLAFLQ
HHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EVNDSLGLFLRANWSDDKTETYAFTEIGRQVAWGGTLKGTAWGRPKDEVGLGMAINMLGS
HHCCCCEEEEEECCCCCCCCEEHHHHHCCCEECCCCCCCCCCCCCHHHCCCCEEEEECCC
NHRNYLAAGGLGAFLGDGALNYGPEQVFEIYYSFAVWKTLSLSPDFQYMRNPGYNRDRGP
CCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCCCCCC
AKFIGIRAHAEF
CEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA