| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is kdgR [C]
Identifier: 94309281
GI number: 94309281
Start: 354044
End: 354850
Strand: Reverse
Name: kdgR [C]
Synonym: Rmet_0336
Alternate gene names: 94309281
Gene position: 354850-354044 (Counterclockwise)
Preceding gene: 94309282
Following gene: 94309280
Centisome position: 9.03
GC content: 70.63
Gene sequence:
>807_bases ATGAGCGACGACATGCTGGCGGACGCCGCCAAACCCCAACGCGGCATCCAGTCGCTCGACAACACAGGCCAGTTGCTCGG CGCGCTGGTCGATGCGGGGCAGCCACTCTCGCTTGGGGAACTCGCACGCGCGGCGGGCATGGTGCCTGCCAAGGCATTTC CGCATCTGGTCAGCCTGCAGAAGATCGGACTGATTTCCCGCAACGCCGATGGCGACTTCCAGGCTGGCACGCTTGGTCTG GAACTCGGCCTGATCGCGCTGCAGCGGCTCTCCCCGACGCGCGAGGCGGAGCCGGAGGTCATCGCCCTGGCCCATGCCAC GGGGTTGTCGGTGGCGATGGCCGTCCAGGGGCCGCTCGGTCCCACCGTGATCCGGCTCGAGGAATCGGCCCGTCCGCAGC ACGTGAGCCTGCGCGTGGGTACCGTGCTGTCGATGGTCAATACGGCGATTGGCCGCGTGGTGGCGGCGCATCTCCCCGAC GACCTGCTGGCCGACGCGCTCGCGCAGGATGCTATCCGCATGGCGGGCACCGCCTTCGACGGCGCGTTGCCATCCGGATA CCTCGAACGGCTGCGCGGCATCCGCGCCGGCGGCATCGACCACGCCGTGAGCCGGCCCGTACCCGGCATCGACACGCTGG CCGCACCGGTGTTCGACCACACCGGCGCGCTCGCCCTGGTGGTCGCGGTGATGGGCAGTAGCGGCAGCTTCGACAGCCGG CTCGACAGCGATACCGCCCACGTGGTGCGGCAGGCCGCGCGGCGGCTGTCATGGCGATTCGGCGCGAGCGGCGCGACGCC CGCCTGA
Upstream 100 bases:
>100_bases GCTCCACCGGGGCGATCGACGTCGCATGGGATGGTCCAGTGGCCAGCGCGCTACGTGCCGCGATCGGCGATATCGCGCGC GCGATGAGGGAAGGTGACGC
Downstream 100 bases:
>100_bases CCTGGCCGCACCGGCCAGCGCCGGCTTCGCGGCCGGCCCTCATCGGAACCTCAACGGAACCTCTACGATCGCCAATTGCC CGTCTATGCTTAGTCAACGG
Product: putative regulatory protein, IclR family
Products: NA
Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Transcriptional Regulator Family Protein; Regulatory Proteins IclR; Regulatory Protein IclR; Transcription Regulator Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Family; Transcriptional Regulator IclR Family Protein; Monosaccharide Transporter; TRANSCRIPTION REGULATOR PROTEIN IclR Domain; IclR Family Regulatory Protein; IclR Family Transcription Regulator Protein; Transcriptional Regulator Iclr Family; Transcriptional Regulator Protein; IclR-Family Transcriptional Regulator; Hmg Transcriptional Repressor; TRANSCRIPTIONal REGULATOR IclR Family
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSDDMLADAAKPQRGIQSLDNTGQLLGALVDAGQPLSLGELARAAGMVPAKAFPHLVSLQKIGLISRNADGDFQAGTLGL ELGLIALQRLSPTREAEPEVIALAHATGLSVAMAVQGPLGPTVIRLEESARPQHVSLRVGTVLSMVNTAIGRVVAAHLPD DLLADALAQDAIRMAGTAFDGALPSGYLERLRGIRAGGIDHAVSRPVPGIDTLAAPVFDHTGALALVVAVMGSSGSFDSR LDSDTAHVVRQAARRLSWRFGASGATPA
Sequences:
>Translated_268_residues MSDDMLADAAKPQRGIQSLDNTGQLLGALVDAGQPLSLGELARAAGMVPAKAFPHLVSLQKIGLISRNADGDFQAGTLGL ELGLIALQRLSPTREAEPEVIALAHATGLSVAMAVQGPLGPTVIRLEESARPQHVSLRVGTVLSMVNTAIGRVVAAHLPD DLLADALAQDAIRMAGTAFDGALPSGYLERLRGIRAGGIDHAVSRPVPGIDTLAAPVFDHTGALALVVAVMGSSGSFDSR LDSDTAHVVRQAARRLSWRFGASGATPA >Mature_267_residues SDDMLADAAKPQRGIQSLDNTGQLLGALVDAGQPLSLGELARAAGMVPAKAFPHLVSLQKIGLISRNADGDFQAGTLGLE LGLIALQRLSPTREAEPEVIALAHATGLSVAMAVQGPLGPTVIRLEESARPQHVSLRVGTVLSMVNTAIGRVVAAHLPDD LLADALAQDAIRMAGTAFDGALPSGYLERLRGIRAGGIDHAVSRPVPGIDTLAAPVFDHTGALALVVAVMGSSGSFDSRL DSDTAHVVRQAARRLSWRFGASGATPA
Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27603; Mature: 27472
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDMLADAAKPQRGIQSLDNTGQLLGALVDAGQPLSLGELARAAGMVPAKAFPHLVSLQ CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH KIGLISRNADGDFQAGTLGLELGLIALQRLSPTREAEPEVIALAHATGLSVAMAVQGPLG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCC PTVIRLEESARPQHVSLRVGTVLSMVNTAIGRVVAAHLPDDLLADALAQDAIRMAGTAFD CEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHC GALPSGYLERLRGIRAGGIDHAVSRPVPGIDTLAAPVFDHTGALALVVAVMGSSGSFDSR CCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC LDSDTAHVVRQAARRLSWRFGASGATPA CCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SDDMLADAAKPQRGIQSLDNTGQLLGALVDAGQPLSLGELARAAGMVPAKAFPHLVSLQ CCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH KIGLISRNADGDFQAGTLGLELGLIALQRLSPTREAEPEVIALAHATGLSVAMAVQGPLG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCC PTVIRLEESARPQHVSLRVGTVLSMVNTAIGRVVAAHLPDDLLADALAQDAIRMAGTAFD CEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHC GALPSGYLERLRGIRAGGIDHAVSRPVPGIDTLAAPVFDHTGALALVVAVMGSSGSFDSR CCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC LDSDTAHVVRQAARRLSWRFGASGATPA CCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA