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The map label for this gene is int

Identifier: 94309262

GI number: 94309262

Start: 335757

End: 336953

Strand: Direct

Name: int

Synonym: Rmet_0317

Alternate gene names: NA

Gene position: 335757-336953 (Clockwise)

Preceding gene: 94309261

Following gene: 94309269

Centisome position: 8.55

GC content: 60.9

Gene sequence:

>1197_bases
ATGCACACCCGATTCCATATGGTAGTGGTCCGGCACCGGGACGGCGAACGCCTGCCGATCCTTCTGGACGCAGACCGGCA
ACCTATTGGCTGGATCAATGAGTATGCGATTCAGCGGCTGCGTTCGCGGCTTTCGGCCAACAGCCTGACTAAGACACTGC
ATGTCCTCGGGCTGCTGTGGCTGTGGGCGGTCCAGCATTCCATTCCGCTGCAGGTTAGATTGCTTGCCGGCGACGGCCTC
TCATCTGACGAGATTGCCAGTCAACTCTATCCTTGGTTAAGGCGCGACTTCCAATCGCGAGTGGCGGTACGCCGGCTGGT
CGTCGCCCCGACTACCGTAGCGCAGCGTCTGCAGGTCGTCATGCAATTCGTTCGTTGGCATCTGGAAAGGGTTATGGCCC
GATTGCCGATTGGAAGCCCGGAGCTGAGCCACGTCAGGGAGCGACTGACCACGATGCAGCGCACGTTCGCCACGGCCGGG
CCAAGGCGGGCCGAACCGGTACATCATGCGTCGCCGCTTTCCGAGGAGCGGGTGAGTCGCCTCCTGAGCATCTGCCGTCC
CGGCAATGATGAAAATCCCTGGAAGGCTGCGTATCAGGACCGCAATTACGTCATCGTATTGGTACTGTTGTTGTTGGGTA
TCCGGCGGGGCGAACTCCTCAAACTACGGGTTGCGGACTGCGTCCTATCGGGTACGATTCCGGAGATTCGGGTCGAGCGC
TCGCCCGACGACGCGAAGGACCCTCGTCGCCATGAACCCCAGGTGAAGACAGAATCGCGCCAGTTGCCTTGCGATCGGGC
GCTGGCTTCACTGCTGAATGCCTATATCTGTCGTACGCGTCGAGCGATACCGGGGGCAGACAAAAGTCCGTTCCTGTTCC
TGAGCCGAGATGGCGCGCCGATGAGCCTGTCTCGCGTCAATGGCTTGCTCACCCAGGTGGGCGCTGCACACGCTGAATTC
CGCGATCTGCACCCGCACTGCCTGCGCAGCACGTGCGCGACGAACTTCCGAGCGCGAGCACTGCGGACGGGCCTGGACGA
GGAGCGCGTCGAGAAGCACATGATGTACTTCTTCGGCTGGCGCTCGTCGGATTCCATCCGCCCTTACGTTTGGCACGCGA
TCAGGCGGGAGTCCTGTGAGCTCAGCCTTGCGTACCAATCGACGATCTTTAATGCGTCGATGACAGGTATCGAATGA

Upstream 100 bases:

>100_bases
ACACTGCCATATTGGACTCCCAGTGCGAGATTGCTTCGTGACACGGAAAAGTCGTAAACATTGCCTACGGTAGTTGGGAT
GCGTCGGCCGAAGGAGCCCC

Downstream 100 bases:

>100_bases
CGAACGCCGAGGTCAATCGCGCAATCATGTCGTTGCTGCGAAAGAACAAGCTTCCACCGTTGCCGAGCTACGTCATCGAC
CGAGATGGCCGTCGTATGGA

Product: tyrosine-based site-specific recombinase CMGI-7

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Integrase/Recombinase; Site Specific Recombinase; Integrase

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MHTRFHMVVVRHRDGERLPILLDADRQPIGWINEYAIQRLRSRLSANSLTKTLHVLGLLWLWAVQHSIPLQVRLLAGDGL
SSDEIASQLYPWLRRDFQSRVAVRRLVVAPTTVAQRLQVVMQFVRWHLERVMARLPIGSPELSHVRERLTTMQRTFATAG
PRRAEPVHHASPLSEERVSRLLSICRPGNDENPWKAAYQDRNYVIVLVLLLLGIRRGELLKLRVADCVLSGTIPEIRVER
SPDDAKDPRRHEPQVKTESRQLPCDRALASLLNAYICRTRRAIPGADKSPFLFLSRDGAPMSLSRVNGLLTQVGAAHAEF
RDLHPHCLRSTCATNFRARALRTGLDEERVEKHMMYFFGWRSSDSIRPYVWHAIRRESCELSLAYQSTIFNASMTGIE

Sequences:

>Translated_398_residues
MHTRFHMVVVRHRDGERLPILLDADRQPIGWINEYAIQRLRSRLSANSLTKTLHVLGLLWLWAVQHSIPLQVRLLAGDGL
SSDEIASQLYPWLRRDFQSRVAVRRLVVAPTTVAQRLQVVMQFVRWHLERVMARLPIGSPELSHVRERLTTMQRTFATAG
PRRAEPVHHASPLSEERVSRLLSICRPGNDENPWKAAYQDRNYVIVLVLLLLGIRRGELLKLRVADCVLSGTIPEIRVER
SPDDAKDPRRHEPQVKTESRQLPCDRALASLLNAYICRTRRAIPGADKSPFLFLSRDGAPMSLSRVNGLLTQVGAAHAEF
RDLHPHCLRSTCATNFRARALRTGLDEERVEKHMMYFFGWRSSDSIRPYVWHAIRRESCELSLAYQSTIFNASMTGIE
>Mature_398_residues
MHTRFHMVVVRHRDGERLPILLDADRQPIGWINEYAIQRLRSRLSANSLTKTLHVLGLLWLWAVQHSIPLQVRLLAGDGL
SSDEIASQLYPWLRRDFQSRVAVRRLVVAPTTVAQRLQVVMQFVRWHLERVMARLPIGSPELSHVRERLTTMQRTFATAG
PRRAEPVHHASPLSEERVSRLLSICRPGNDENPWKAAYQDRNYVIVLVLLLLGIRRGELLKLRVADCVLSGTIPEIRVER
SPDDAKDPRRHEPQVKTESRQLPCDRALASLLNAYICRTRRAIPGADKSPFLFLSRDGAPMSLSRVNGLLTQVGAAHAEF
RDLHPHCLRSTCATNFRARALRTGLDEERVEKHMMYFFGWRSSDSIRPYVWHAIRRESCELSLAYQSTIFNASMTGIE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45627; Mature: 45627

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTRFHMVVVRHRDGERLPILLDADRQPIGWINEYAIQRLRSRLSANSLTKTLHVLGLLW
CCCEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWAVQHSIPLQVRLLAGDGLSSDEIASQLYPWLRRDFQSRVAVRRLVVAPTTVAQRLQVV
HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MQFVRWHLERVMARLPIGSPELSHVRERLTTMQRTFATAGPRRAEPVHHASPLSEERVSR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
LLSICRPGNDENPWKAAYQDRNYVIVLVLLLLGIRRGELLKLRVADCVLSGTIPEIRVER
HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEC
SPDDAKDPRRHEPQVKTESRQLPCDRALASLLNAYICRTRRAIPGADKSPFLFLSRDGAP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
MSLSRVNGLLTQVGAAHAEFRDLHPHCLRSTCATNFRARALRTGLDEERVEKHMMYFFGW
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
RSSDSIRPYVWHAIRRESCELSLAYQSTIFNASMTGIE
CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHTRFHMVVVRHRDGERLPILLDADRQPIGWINEYAIQRLRSRLSANSLTKTLHVLGLLW
CCCEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWAVQHSIPLQVRLLAGDGLSSDEIASQLYPWLRRDFQSRVAVRRLVVAPTTVAQRLQVV
HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MQFVRWHLERVMARLPIGSPELSHVRERLTTMQRTFATAGPRRAEPVHHASPLSEERVSR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
LLSICRPGNDENPWKAAYQDRNYVIVLVLLLLGIRRGELLKLRVADCVLSGTIPEIRVER
HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEC
SPDDAKDPRRHEPQVKTESRQLPCDRALASLLNAYICRTRRAIPGADKSPFLFLSRDGAP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
MSLSRVNGLLTQVGAAHAEFRDLHPHCLRSTCATNFRARALRTGLDEERVEKHMMYFFGW
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
RSSDSIRPYVWHAIRRESCELSLAYQSTIFNASMTGIE
CCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA