Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 94309231

GI number: 94309231

Start: 302634

End: 302894

Strand: Direct

Name: fdx [H]

Synonym: Rmet_0286

Alternate gene names: 94309231

Gene position: 302634-302894 (Clockwise)

Preceding gene: 94309230

Following gene: 94309238

Centisome position: 7.7

GC content: 59.0

Gene sequence:

>261_bases
ATGGCGCTGATGATCACCGACGACTGCATTAATTGCGACGTTTGTGAGCCTGAGTGCCCGAACGAAGCCATCTCGATGGG
GCCCGAGATCTATGAGATCGACCCCGGCAAGTGCACCGAGTGTGTCGGCCATTTCGACGAACCGCAGTGCCAGCAGGTAT
GCCCTGTGGCGTGTATTCCGAAAGACCCGAACCACGTCGAAACGCACGAGGTGCTGATGCAACGCTATCGGCTGCTCACG
GCAGCCAAGCACGTGGCCTGA

Upstream 100 bases:

>100_bases
CTGGCTTCAGGAGAAGATCGGCAAAGCCGAATAGAATAGAGGCCTTCGATGCCGTCTCCGTGGCCAGTCGGGCGCGGGCG
GATCGCAGGAAGGAAATATC

Downstream 100 bases:

>100_bases
AGCTGGATCTCTTATCCGGCTGCTATCGTTCCGGCCCCCACAGGCAAGAGCAGAAAAGAGAAACCCCGCGAAACCGTCAG
GTTTGCGGGGTTTTTTCTTT

Product: Ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MALMITDDCINCDVCEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVACIPKDPNHVETHEVLMQRYRLLT
AAKHVA

Sequences:

>Translated_86_residues
MALMITDDCINCDVCEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVACIPKDPNHVETHEVLMQRYRLLT
AAKHVA
>Mature_85_residues
ALMITDDCINCDVCEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVACIPKDPNHVETHEVLMQRYRLLTA
AKHVA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=61.6279069767442, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9589; Mature: 9458

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
15.1 %Cys+Met (Translated Protein)
10.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
14.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDDCINCDVCEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVACIP
CEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHCCCCCCCCHHCCCEEECC
KDPNHVETHEVLMQRYRLLTAAKHVA
CCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALMITDDCINCDVCEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVACIP
EEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHCCCCCCCCHHCCCEEECC
KDPNHVETHEVLMQRYRLLTAAKHVA
CCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]