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The map label for this gene is ftsY [H]

Identifier: 94309226

GI number: 94309226

Start: 296919

End: 297941

Strand: Reverse

Name: ftsY [H]

Synonym: Rmet_0281

Alternate gene names: 94309226

Gene position: 297941-296919 (Counterclockwise)

Preceding gene: 94309232

Following gene: 94309223

Centisome position: 7.58

GC content: 66.67

Gene sequence:

>1023_bases
GTGGCGCCACCCGTGGCGCCTCCGGTCGTGCCGCCCGTGGCGTCGGCTCCGCCTCCGGCCAGCTATACGCCGCCGGTCAT
CGAGGAGCTGGAGCTGACCCCGCCGCCCGCGCAAACCGCCGAAGCCAAGCGCGGCTGGATGTCGCGGCTGCGTGCCGGCC
TGTCGAAGACCAGCCGCAACATCGGCGTGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAACTGGAAACA
GCGCTGCTGATGGCCGATGCCGGAGTGGAGGCCACCGAGTACCTGCTGGGCGAACTGCGCCGCCGCATCAAGAATGATCG
TATCGAAACGGCCGAAGGCGTGAAGGCCGCGCTCAAGGATCTGCTGACGCAGCTGCTCAAGCCGCTCGAGAAGACGATGG
AACTGGGCCGCGAGCAGCCGCTGGTGATGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGTAAGCTC
TGCAAGCATTTCCAGTCCTATCACCAGTCCGTGCTGCTGGCCGCCGGCGACACATTCCGCGCCGCCGCGCGCGAACAACT
CACGATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCCCAGGAAAGTGGCGACCCAGCCGCCGTGATCTTCGATGCCG
TCAACGCGGCGCGCGCGCGCAAGATCGACATCGTGATGGCAGATACCGCTGGCCGCCTGCCCACGCAGCTTCACCTGATG
GAGGAACTCAAGAAGGTCAAGCGCGTGATCGGCAAGTCGATGCCGACCGCACCGCATGAAGTGCTGCTTGTGATCGACGC
CAATACTGGTCAGAACGCACTGGCCCAGACGCGCGCGTTCGATGACGCGCTCGGCCTGACCGGCCTGATCGTGACCAAGC
TCGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATCGCGCGCCAGCGTCCGGTACCGGTGTACTTCATCGGCGTGGGC
GAGAAGGTCGAGGACCTGCAGCCGTTCAAGGCGGACGAGTTCGCCGAGGCGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
CCCTGTCGCCCCCCCTGTAGCGGCACCCGTTGCAACCCCGGTTTCGGCCCCGGCTTCAACACCTGCGCCAGTTCCAACGC
CCGCCCCGTCGCCGGTCCAT

Downstream 100 bases:

>100_bases
GTCCGGCTGGCACGCAAAAACAAAAACCCCGGTGAGGACACCGGGGTTTTTGTTTCTGGCAACGCTACCGCTTACTCGCT
GTCCGGCTGCGCCCCGGGCG

Product: putative cell division protein; signal recognition particle receptor FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG

Sequences:

>Translated_340_residues
MAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELET
ALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKL
CKHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EKVEDLQPFKADEFAEALLG
>Mature_339_residues
APPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRNIGVLFVGVKVDEALFEELETA
LLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKDLLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLC
KHFQSYHQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLME
ELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGE
KVEDLQPFKADEFAEALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=279, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=33.6244541484716, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI295424842, Length=288, Percent_Identity=31.25, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI23308697, Length=288, Percent_Identity=31.25, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=37.956204379562, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1789874, Length=327, Percent_Identity=49.8470948012232, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1788963, Length=296, Percent_Identity=34.4594594594595, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=302, Percent_Identity=30.794701986755, Blast_Score=120, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=298, Percent_Identity=30.8724832214765, Blast_Score=110, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=282, Percent_Identity=30.4964539007092, Blast_Score=126, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=305, Percent_Identity=26.2295081967213, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17647949, Length=277, Percent_Identity=32.4909747292419, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24641198, Length=262, Percent_Identity=29.7709923664122, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 36446; Mature: 36315

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
IGVLFVGVKVDEALFEELETALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKD
CEEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLCKHFQSYHQSVLLAAGDTFR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCHHH
AAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
HHHHCEEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHEEEEEEEECCCCCCCHHHHHH
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKG
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
GILAAIARQRPVPVYFIGVGEKVEDLQPFKADEFAEALLG
CHHHHHHHCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
APPVAPPVVPPVASAPPPASYTPPVIEELELTPPPAQTAEAKRGWMSRLRAGLSKTSRN
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
IGVLFVGVKVDEALFEELETALLMADAGVEATEYLLGELRRRIKNDRIETAEGVKAALKD
CEEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LLTQLLKPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLCKHFQSYHQSVLLAAGDTFR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCHHH
AAAREQLTIWGERNNVTVVAQESGDPAAVIFDAVNAARARKIDIVMADTAGRLPTQLHLM
HHHHCEEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHEEEEEEEECCCCCCCHHHHHH
EELKKVKRVIGKSMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKG
HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
GILAAIARQRPVPVYFIGVGEKVEDLQPFKADEFAEALLG
CHHHHHHHCCCCCEEEEECCCCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]