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The map label for this gene is tse [H]

Identifier: 94309105

GI number: 94309105

Start: 166140

End: 167681

Strand: Reverse

Name: tse [H]

Synonym: Rmet_0160

Alternate gene names: 94309105

Gene position: 167681-166140 (Counterclockwise)

Preceding gene: 94309106

Following gene: 94309103

Centisome position: 4.27

GC content: 63.75

Gene sequence:

>1542_bases
ATGACTATCAGCAAACGTCTGTTACTTACGCTCTCCATTGCACTGCTCGCGCTGCTCTTTGTCGGCATCGGCGGCATCTG
GCAGATGGGCGAATCGGAGAAACGCCTCGAGTACTTCAACGACAACACGCTCGGCAGCGTCCATGACCTGAATACCGTCG
CCGAATCGGTCGCCGCAATGCGTATCGAGTTGTATCGCCACGGCCTCAGCGAGGACGCCAAGGGTCTGGCCGAGATCGAG
CAACAATTCGACGAGGCCAGCAAGCGCTTTGACAGGATGATCGACAAGTACGAGCGCGATGACATCTCGGACGAAACGGA
CCGCGCAATGCTTGCGGCCGATCGCGCCGCGGTCAAACACTATCGCGACCAGATCCCGGCCTTCTTCGAGCGCTCCCGTA
CCGGCGACTATGCCGGCGCGAAGCAGATGCTGACGGCCGGCGAGCTGTTCAAGGCCTCCCTGGCGCTGCGTAAAACGGTG
GCCGAGCACCTCGAGTACAACACCAAGCAGGGCGGGATCGCCGTGGAGAACAACAAGGCCCAACATGCACGGTCTGTCAG
CATTTCCCTGAGCGTGATCGTCATTACCGTCGCCCTCACGGCCATCATGGCGCTGATGCTGTTCCGGCGGATCCGAGGCA
GCCTGGCGCAGATCCAGGGCTCGCTCGAATACGTCAGCCGCACGCTCGACCTCGATCATCGTGCCGCCGTGGACCGGCTC
GACGAAATCGGCCTTACCGCGCAATCGTTCAACACGCTGCTCGAGCGCGTGGCGGGTACGTTGCGCGACGTACGTCGATC
GACCGATTCTGTCGGCGTCGCGGCCGCGCAGATTGCCGCCGGGAACACCGACCTGTCCTCGCGCACGGAACAACAGGCGG
CCTCGCTCGAGGAGACCGCCTCGAGCATGGAGCAATTGAGCACGACTGTCCGCCAGAACGCCGACAACGCCCAGCAGGCA
TCGTCGCTGGCCAGCAACGCCGCGCAGGTGGCAGATCAAGGCAACCAGGCGGTCAACCAGATGGTGGAGACGATGGGCGC
GATCAGCACCAGTTCCGGGCGCATCGCCGAGATCACGAACATGATCGAGGGCATTGCGTTCCAGACCAACATCCTCGCGC
TCAATGCCGCCGTGGAAGCCGCACGCGCGGGGGAACAGGGCCGCGGATTCGCCGTGGTGGCGGGCGAAGTGCGCAGCCTC
GCGCAACGCTCTTCCAGCGCGGCCAAGGAAATCAAGGATCTGATCGAAGCCTCGGCGGAAACCGTGCGTGCCGGCTCCGA
GCAGGCGCATGGCGTGGGAAGCACGATGACGGAGATCCAGCAAGCCGTGAGGCGTGTGTCGGACATCATCACGGAGATCT
CTGCGGCCTCGCGGGAGCAGAGCACCGGCATCGAGCAGGTGGGACACGCAGTGGGCCAGATGGACCAGGTCACGCAGCAG
AACGCGGCACTGGTCGAAGAAGCCGCCGCCGCCGCGCAGTCGCTTGACGAACAAGCCAGCAAGCTGCGCGAGATGGTGGG
CCAGTTCAGGATGAGCGTCTGA

Upstream 100 bases:

>100_bases
TGCACTCCGTAAACGTTGAGGTGACGGGCAGTCGGCCCGCTGCGAAATCCAAGTCACCCAACGGACGACGCTTGCCTTGC
GGCGTGCGTCGAATAGCCCC

Downstream 100 bases:

>100_bases
GTACGCCGTCCACGGAGGTCACCCGGTACGCCGCCAACGCGGCGGCCTGCGTCAATCGGCCGCCACGGTTTCGAGAATCC
GCAACGTCACATGCGGCGCG

Product: Methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTISKRLLLTLSIALLALLFVGIGGIWQMGESEKRLEYFNDNTLGSVHDLNTVAESVAAMRIELYRHGLSEDAKGLAEIE
QQFDEASKRFDRMIDKYERDDISDETDRAMLAADRAAVKHYRDQIPAFFERSRTGDYAGAKQMLTAGELFKASLALRKTV
AEHLEYNTKQGGIAVENNKAQHARSVSISLSVIVITVALTAIMALMLFRRIRGSLAQIQGSLEYVSRTLDLDHRAAVDRL
DEIGLTAQSFNTLLERVAGTLRDVRRSTDSVGVAAAQIAAGNTDLSSRTEQQAASLEETASSMEQLSTTVRQNADNAQQA
SSLASNAAQVADQGNQAVNQMVETMGAISTSSGRIAEITNMIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSL
AQRSSSAAKEIKDLIEASAETVRAGSEQAHGVGSTMTEIQQAVRRVSDIITEISAASREQSTGIEQVGHAVGQMDQVTQQ
NAALVEEAAAAAQSLDEQASKLREMVGQFRMSV

Sequences:

>Translated_513_residues
MTISKRLLLTLSIALLALLFVGIGGIWQMGESEKRLEYFNDNTLGSVHDLNTVAESVAAMRIELYRHGLSEDAKGLAEIE
QQFDEASKRFDRMIDKYERDDISDETDRAMLAADRAAVKHYRDQIPAFFERSRTGDYAGAKQMLTAGELFKASLALRKTV
AEHLEYNTKQGGIAVENNKAQHARSVSISLSVIVITVALTAIMALMLFRRIRGSLAQIQGSLEYVSRTLDLDHRAAVDRL
DEIGLTAQSFNTLLERVAGTLRDVRRSTDSVGVAAAQIAAGNTDLSSRTEQQAASLEETASSMEQLSTTVRQNADNAQQA
SSLASNAAQVADQGNQAVNQMVETMGAISTSSGRIAEITNMIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSL
AQRSSSAAKEIKDLIEASAETVRAGSEQAHGVGSTMTEIQQAVRRVSDIITEISAASREQSTGIEQVGHAVGQMDQVTQQ
NAALVEEAAAAAQSLDEQASKLREMVGQFRMSV
>Mature_512_residues
TISKRLLLTLSIALLALLFVGIGGIWQMGESEKRLEYFNDNTLGSVHDLNTVAESVAAMRIELYRHGLSEDAKGLAEIEQ
QFDEASKRFDRMIDKYERDDISDETDRAMLAADRAAVKHYRDQIPAFFERSRTGDYAGAKQMLTAGELFKASLALRKTVA
EHLEYNTKQGGIAVENNKAQHARSVSISLSVIVITVALTAIMALMLFRRIRGSLAQIQGSLEYVSRTLDLDHRAAVDRLD
EIGLTAQSFNTLLERVAGTLRDVRRSTDSVGVAAAQIAAGNTDLSSRTEQQAASLEETASSMEQLSTTVRQNADNAQQAS
SLASNAAQVADQGNQAVNQMVETMGAISTSSGRIAEITNMIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLA
QRSSSAAKEIKDLIEASAETVRAGSEQAHGVGSTMTEIQQAVRRVSDIITEISAASREQSTGIEQVGHAVGQMDQVTQQN
AALVEEAAAAAQSLDEQASKLREMVGQFRMSV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=378, Percent_Identity=50, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1788194, Length=341, Percent_Identity=52.1994134897361, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787690, Length=271, Percent_Identity=56.8265682656827, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI1788195, Length=310, Percent_Identity=54.8387096774194, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI1789453, Length=270, Percent_Identity=42.962962962963, Blast_Score=207, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55271; Mature: 55140

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISKRLLLTLSIALLALLFVGIGGIWQMGESEKRLEYFNDNTLGSVHDLNTVAESVAAM
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RIELYRHGLSEDAKGLAEIEQQFDEASKRFDRMIDKYERDDISDETDRAMLAADRAAVKH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YRDQIPAFFERSRTGDYAGAKQMLTAGELFKASLALRKTVAEHLEYNTKQGGIAVENNKA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCH
QHARSVSISLSVIVITVALTAIMALMLFRRIRGSLAQIQGSLEYVSRTLDLDHRAAVDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DEIGLTAQSFNTLLERVAGTLRDVRRSTDSVGVAAAQIAAGNTDLSSRTEQQAASLEETA
HHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SSMEQLSTTVRQNADNAQQASSLASNAAQVADQGNQAVNQMVETMGAISTSSGRIAEITN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHH
MIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSSSAAKEIKDLIEASAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVRAGSEQAHGVGSTMTEIQQAVRRVSDIITEISAASREQSTGIEQVGHAVGQMDQVTQQ
HHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NAALVEEAAAAAQSLDEQASKLREMVGQFRMSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TISKRLLLTLSIALLALLFVGIGGIWQMGESEKRLEYFNDNTLGSVHDLNTVAESVAAM
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RIELYRHGLSEDAKGLAEIEQQFDEASKRFDRMIDKYERDDISDETDRAMLAADRAAVKH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YRDQIPAFFERSRTGDYAGAKQMLTAGELFKASLALRKTVAEHLEYNTKQGGIAVENNKA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCH
QHARSVSISLSVIVITVALTAIMALMLFRRIRGSLAQIQGSLEYVSRTLDLDHRAAVDRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DEIGLTAQSFNTLLERVAGTLRDVRRSTDSVGVAAAQIAAGNTDLSSRTEQQAASLEETA
HHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SSMEQLSTTVRQNADNAQQASSLASNAAQVADQGNQAVNQMVETMGAISTSSGRIAEITN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHH
MIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSSSAAKEIKDLIEASAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVRAGSEQAHGVGSTMTEIQQAVRRVSDIITEISAASREQSTGIEQVGHAVGQMDQVTQQ
HHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NAALVEEAAAAAQSLDEQASKLREMVGQFRMSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]