| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is hipO [H]
Identifier: 94308966
GI number: 94308966
Start: 24791
End: 26068
Strand: Direct
Name: hipO [H]
Synonym: Rmet_0021
Alternate gene names: 94308966
Gene position: 24791-26068 (Clockwise)
Preceding gene: 94308965
Following gene: 94308968
Centisome position: 0.63
GC content: 64.87
Gene sequence:
>1278_bases ATGTCTGAACACGCCCCCGAAATCGAAGACCCCGACATCGACGCCCCTGAAGTCGCATCGATCCTCAAGTCTGTCTCCGT CCGCCTCGCCAAGGATTCCCCCACCCGGTCCTTCTGCACCCTGCACGACACGCTCGACTCGCGTGACGAACTGCAGGACA TCCGCCGCCATATCCACCAGCATCCCGAGCTTGCCTTCAACGAGGTCCACACGGCCGAACTCGTCGCCAGCAAGCTGGAG AACTGGGGCTACACGGTCACACGTGGCGTGGGCGGTACTGGCGTGGTGGCCTCGCTGCGAGTGGGCGCGGGGCAACGCAG CGTCGGCATTCGCGCCGACATGGATGCATTGCCGATCCACGAGCGGTCGGGCTTGCCCTATGCCAGCGTGCACGACGGCA AGATGCACGCGTGTGGCCATGATGGCCACACCGCCGTGCTACTGGGTGCCGCGCGGCAACTGGCACGTACCCGGCAATTC GATGGCACCGTGCACCTGATCTTCCAGCCGGCCGAGGAGATCGGGGCGGGCGGTGGCGCGGAACGGATGCTGGCCGACGG CCTGTTCGAACGCTTTCCGTGCGATGCGATATTTGGCCTGCATAACCATCCGGGTGCCGAGGCCGGTACCTTCATGTTCC GTTCGGGCCCGTTCATGGCCGCGTGCGACACCGTAGCGATCACCATCCGAGGGAAGGGGGGCCATGCCGCGCGGCCGCAT CAGTCGATTGATCCGATCCTGGTCGCGGGCAGTCTGGTCATGGCGCTGCAGTCCATCGTGGCGCGCAACGTCGATCCGAA TGAGACTGCCGTGGTGACCATCGGCACGCTGCATGCGGGCCACGCGCCCAATGTGATTCCAGATAGCGCGCGCATGGAAC TCAGCGTGCGCTCATTCAGTGCGGATGTCCGGGCATCCATGGAAACGCGCATCAAGCAGCTTGCCACGTCACACGCCGAG GGCTACGGCGCGACGGCCGATATCGAGTACGTGCGTGGCTATCCGGTGCTCGTCAACAGCGAAGCGGAGACCGAGTTCGC ACGCCAGGTGGCCGAGGAACTGGTGGGCCCCGAACGTGCAATCGCGAATTTCCACCGCATCGCCGGCAGTGAGGACTTCG CTTACTTCCTGCAGCAGCGGCCCGGGTGTTTCGTCCGGATGGGCAATGGGGTCAACCAGCCGCTGCTTCACAACGCCGGC TACGACTTCAATGACGACAACCTGACCGTCGGGGCGGCTTACTGGACGCGGCTGGTCGAGCGTTACCTCGCCGGGTAG
Upstream 100 bases:
>100_bases CGTGATTCCGGGCGTTTTCGCACGAAATCAGCATTCCAGGTTTTCTTCCTTGGGGTGCGTGAAATACTGTTCATACATGT CTGCCGTTTAGAGCACTGTC
Downstream 100 bases:
>100_bases GACAGGGCGACAGGACTATTTGAAGAAGGCACTCGGCGGCACGCCGAACTGCCGGCGGAACATCGTCGCGAAGGCGCTCG GGCTGCCATAGCCCATGTCG
Product: putative peptidase, M20D subfamily
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSEHAPEIEDPDIDAPEVASILKSVSVRLAKDSPTRSFCTLHDTLDSRDELQDIRRHIHQHPELAFNEVHTAELVASKLE NWGYTVTRGVGGTGVVASLRVGAGQRSVGIRADMDALPIHERSGLPYASVHDGKMHACGHDGHTAVLLGAARQLARTRQF DGTVHLIFQPAEEIGAGGGAERMLADGLFERFPCDAIFGLHNHPGAEAGTFMFRSGPFMAACDTVAITIRGKGGHAARPH QSIDPILVAGSLVMALQSIVARNVDPNETAVVTIGTLHAGHAPNVIPDSARMELSVRSFSADVRASMETRIKQLATSHAE GYGATADIEYVRGYPVLVNSEAETEFARQVAEELVGPERAIANFHRIAGSEDFAYFLQQRPGCFVRMGNGVNQPLLHNAG YDFNDDNLTVGAAYWTRLVERYLAG
Sequences:
>Translated_425_residues MSEHAPEIEDPDIDAPEVASILKSVSVRLAKDSPTRSFCTLHDTLDSRDELQDIRRHIHQHPELAFNEVHTAELVASKLE NWGYTVTRGVGGTGVVASLRVGAGQRSVGIRADMDALPIHERSGLPYASVHDGKMHACGHDGHTAVLLGAARQLARTRQF DGTVHLIFQPAEEIGAGGGAERMLADGLFERFPCDAIFGLHNHPGAEAGTFMFRSGPFMAACDTVAITIRGKGGHAARPH QSIDPILVAGSLVMALQSIVARNVDPNETAVVTIGTLHAGHAPNVIPDSARMELSVRSFSADVRASMETRIKQLATSHAE GYGATADIEYVRGYPVLVNSEAETEFARQVAEELVGPERAIANFHRIAGSEDFAYFLQQRPGCFVRMGNGVNQPLLHNAG YDFNDDNLTVGAAYWTRLVERYLAG >Mature_424_residues SEHAPEIEDPDIDAPEVASILKSVSVRLAKDSPTRSFCTLHDTLDSRDELQDIRRHIHQHPELAFNEVHTAELVASKLEN WGYTVTRGVGGTGVVASLRVGAGQRSVGIRADMDALPIHERSGLPYASVHDGKMHACGHDGHTAVLLGAARQLARTRQFD GTVHLIFQPAEEIGAGGGAERMLADGLFERFPCDAIFGLHNHPGAEAGTFMFRSGPFMAACDTVAITIRGKGGHAARPHQ SIDPILVAGSLVMALQSIVARNVDPNETAVVTIGTLHAGHAPNVIPDSARMELSVRSFSADVRASMETRIKQLATSHAEG YGATADIEYVRGYPVLVNSEAETEFARQVAEELVGPERAIANFHRIAGSEDFAYFLQQRPGCFVRMGNGVNQPLLHNAGY DFNDDNLTVGAAYWTRLVERYLAG
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=417, Percent_Identity=28.2973621103118, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787598, Length=205, Percent_Identity=30.7317073170732, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 45896; Mature: 45765
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHAPEIEDPDIDAPEVASILKSVSVRLAKDSPTRSFCTLHDTLDSRDELQDIRRHIHQ CCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCHHHHHHHHHHHHC HPELAFNEVHTAELVASKLENWGYTVTRGVGGTGVVASLRVGAGQRSVGIRADMDALPIH CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCEECCCCCCCH ERSGLPYASVHDGKMHACGHDGHTAVLLGAARQLARTRQFDGTVHLIFQPAEEIGAGGGA HCCCCCEEEECCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCH ERMLADGLFERFPCDAIFGLHNHPGAEAGTFMFRSGPFMAACDTVAITIRGKGGHAARPH HHHHHHHHHHHCCCHHEECCCCCCCCCCCEEEEECCCCEEEECEEEEEEECCCCCCCCCC QSIDPILVAGSLVMALQSIVARNVDPNETAVVTIGTLHAGHAPNVIPDSARMELSVRSFS CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHH ADVRASMETRIKQLATSHAEGYGATADIEYVRGYPVLVNSEAETEFARQVAEELVGPERA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCHHHHHHHHHHHHHCCHHHH IANFHRIAGSEDFAYFLQQRPGCFVRMGNGVNQPLLHNAGYDFNDDNLTVGAAYWTRLVE HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHH RYLAG HHHCC >Mature Secondary Structure SEHAPEIEDPDIDAPEVASILKSVSVRLAKDSPTRSFCTLHDTLDSRDELQDIRRHIHQ CCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCHHHHHHHHHHHHC HPELAFNEVHTAELVASKLENWGYTVTRGVGGTGVVASLRVGAGQRSVGIRADMDALPIH CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCEECCCCCCCH ERSGLPYASVHDGKMHACGHDGHTAVLLGAARQLARTRQFDGTVHLIFQPAEEIGAGGGA HCCCCCEEEECCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCH ERMLADGLFERFPCDAIFGLHNHPGAEAGTFMFRSGPFMAACDTVAITIRGKGGHAARPH HHHHHHHHHHHCCCHHEECCCCCCCCCCCEEEEECCCCEEEECEEEEEEECCCCCCCCCC QSIDPILVAGSLVMALQSIVARNVDPNETAVVTIGTLHAGHAPNVIPDSARMELSVRSFS CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHH ADVRASMETRIKQLATSHAEGYGATADIEYVRGYPVLVNSEAETEFARQVAEELVGPERA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCHHHHHHHHHHHHHCCHHHH IANFHRIAGSEDFAYFLQQRPGCFVRMGNGVNQPLLHNAGYDFNDDNLTVGAAYWTRLVE HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHH RYLAG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]