Click here to switch to the map view.

The map label for this gene is ycgM [C]

Identifier: 94308965

GI number: 94308965

Start: 23692

End: 24558

Strand: Direct

Name: ycgM [C]

Synonym: Rmet_0020

Alternate gene names: 94308965

Gene position: 23692-24558 (Clockwise)

Preceding gene: 94308964

Following gene: 94308966

Centisome position: 0.6

GC content: 66.67

Gene sequence:

>867_bases
ATGAAACTAGTCCGCATTGGAGAACCCGGCGCCGAGCGCCCCGGCATGTTGGACAGCGACGGCCGCGTGCGCGACCTGTC
CGGCGTGATCGACAACATCGGCCCGCAGGAACTGGCGCCTGGCGTGCTGGCCCGTCTGGCGAACATCGACCCCGCCACGC
TGCCGGTGGTGGAGGGCGGACGCTTCGGCGTGCCCTGGAGCGGCGTTGGCAAGATCGTTGCCATCGGCCTGAACTATGCC
GACCACGCCGCCGAAGCCGGCATGCCGCTACCGACCGAGCCGATCGTGTTCCTGAAGGCCAACACGTCGCTGAACGGCCC
GAACGACAACGTGATGTTGCCGCTCGATTCGCAGAAATCGGACTGGGAAGTGGAACTGGGCGTGGTGATTGGCACCCGGG
CTCGGAATGTGTGGAAGGAGCAGGCGCTCGACTACGTGGCCGGCTACTGCGTGGTCAATGATGTCTCCGAGCGCGAATTC
CAGCTCGAGCGCGGCGGCACGTGGGACAAGGGCAAGGGCTGCGACACCTTCTGTCCGGCGGGCCCGTGGCTGGTCACGCG
TGACGAGGTACCCGACGCGCAAAAGCTGGGGATGTGGCTCGACGTCAATGGCGAGCGCATGCAGAAGGGCAGCACGGCCA
CCATGGTTTTCGATGTGGCGACGATCGTCAGCTATGTCAGCCGCTTCATGACGCTGGAGCCCGGCGACCTGATCGCCACC
GGCACGCCGCCGGGTGTGGGCATGGGCTTCAAGCCGCCGCGCTACCTGCGTGCCGGCGACGTGATGCGCCTGGGCGTCGA
GGGGCTTGGCGAGCAGTCCCAGAACGTCGTGGCCTACGTCGGGCGCGGTGGCGCAATACGAATCTAG

Upstream 100 bases:

>100_bases
CCGCCCACTACCGTGTGCCGTCGATGCTGGGCTGAACGGGCAGGGGTCTCGCGCTTGCGCTATGCTCGCGGGCTGGTGCT
ACCGCAAGGAGACGAGACCC

Downstream 100 bases:

>100_bases
GCGGATTCAGACGGATCCAGGGCAGGGCGGTTGGGTGTCCGCGGCGACATCGGCGCGGGTTCCCAACGGAAACGTCTTCA
CACAAATCGTCGCAGTTCCA

Product: Fumarylacetoacetate hydrolase family protein

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKLVRIGEPGAERPGMLDSDGRVRDLSGVIDNIGPQELAPGVLARLANIDPATLPVVEGGRFGVPWSGVGKIVAIGLNYA
DHAAEAGMPLPTEPIVFLKANTSLNGPNDNVMLPLDSQKSDWEVELGVVIGTRARNVWKEQALDYVAGYCVVNDVSEREF
QLERGGTWDKGKGCDTFCPAGPWLVTRDEVPDAQKLGMWLDVNGERMQKGSTATMVFDVATIVSYVSRFMTLEPGDLIAT
GTPPGVGMGFKPPRYLRAGDVMRLGVEGLGEQSQNVVAYVGRGGAIRI

Sequences:

>Translated_288_residues
MKLVRIGEPGAERPGMLDSDGRVRDLSGVIDNIGPQELAPGVLARLANIDPATLPVVEGGRFGVPWSGVGKIVAIGLNYA
DHAAEAGMPLPTEPIVFLKANTSLNGPNDNVMLPLDSQKSDWEVELGVVIGTRARNVWKEQALDYVAGYCVVNDVSEREF
QLERGGTWDKGKGCDTFCPAGPWLVTRDEVPDAQKLGMWLDVNGERMQKGSTATMVFDVATIVSYVSRFMTLEPGDLIAT
GTPPGVGMGFKPPRYLRAGDVMRLGVEGLGEQSQNVVAYVGRGGAIRI
>Mature_288_residues
MKLVRIGEPGAERPGMLDSDGRVRDLSGVIDNIGPQELAPGVLARLANIDPATLPVVEGGRFGVPWSGVGKIVAIGLNYA
DHAAEAGMPLPTEPIVFLKANTSLNGPNDNVMLPLDSQKSDWEVELGVVIGTRARNVWKEQALDYVAGYCVVNDVSEREF
QLERGGTWDKGKGCDTFCPAGPWLVTRDEVPDAQKLGMWLDVNGERMQKGSTATMVFDVATIVSYVSRFMTLEPGDLIAT
GTPPGVGMGFKPPRYLRAGDVMRLGVEGLGEQSQNVVAYVGRGGAIRI

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=229, Percent_Identity=46.2882096069869, Blast_Score=206, Evalue=2e-53,
Organism=Homo sapiens, GI40786394, Length=229, Percent_Identity=45.4148471615721, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI66348062, Length=207, Percent_Identity=38.6473429951691, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI215422413, Length=212, Percent_Identity=38.2075471698113, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI13654274, Length=214, Percent_Identity=37.8504672897196, Blast_Score=150, Evalue=2e-36,
Organism=Escherichia coli, GI1787428, Length=203, Percent_Identity=35.4679802955665, Blast_Score=132, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17557057, Length=199, Percent_Identity=37.1859296482412, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6324161, Length=213, Percent_Identity=30.9859154929577, Blast_Score=96, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28572127, Length=215, Percent_Identity=47.4418604651163, Blast_Score=195, Evalue=3e-50,
Organism=Drosophila melanogaster, GI28571789, Length=211, Percent_Identity=40.7582938388626, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24663695, Length=217, Percent_Identity=34.5622119815668, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 30851; Mature: 30851

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRIGEPGAERPGMLDSDGRVRDLSGVIDNIGPQELAPGVLARLANIDPATLPVVEGG
CEEEEECCCCCCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCC
RFGVPWSGVGKIVAIGLNYADHAAEAGMPLPTEPIVFLKANTSLNGPNDNVMLPLDSQKS
CCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCC
DWEVELGVVIGTRARNVWKEQALDYVAGYCVVNDVSEREFQLERGGTWDKGKGCDTFCPA
CCEEEEEEEEECHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHCCCCCCCCCCCCCCCCC
GPWLVTRDEVPDAQKLGMWLDVNGERMQKGSTATMVFDVATIVSYVSRFMTLEPGDLIAT
CCEEEECCCCCCHHHCCEEEECCHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEC
GTPPGVGMGFKPPRYLRAGDVMRLGVEGLGEQSQNVVAYVGRGGAIRI
CCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCEEEEECCCCEEEC
>Mature Secondary Structure
MKLVRIGEPGAERPGMLDSDGRVRDLSGVIDNIGPQELAPGVLARLANIDPATLPVVEGG
CEEEEECCCCCCCCCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCC
RFGVPWSGVGKIVAIGLNYADHAAEAGMPLPTEPIVFLKANTSLNGPNDNVMLPLDSQKS
CCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCC
DWEVELGVVIGTRARNVWKEQALDYVAGYCVVNDVSEREFQLERGGTWDKGKGCDTFCPA
CCEEEEEEEEECHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHCCCCCCCCCCCCCCCCC
GPWLVTRDEVPDAQKLGMWLDVNGERMQKGSTATMVFDVATIVSYVSRFMTLEPGDLIAT
CCEEEECCCCCCHHHCCEEEECCHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEC
GTPPGVGMGFKPPRYLRAGDVMRLGVEGLGEQSQNVVAYVGRGGAIRI
CCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA