| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94308959
Identifier: 94308959
GI number: 94308959
Start: 17884
End: 18834
Strand: Direct
Name: 94308959
Synonym: Rmet_0014
Alternate gene names: NA
Gene position: 17884-18834 (Clockwise)
Preceding gene: 94308958
Following gene: 94308960
Centisome position: 0.46
GC content: 63.2
Gene sequence:
>951_bases ATGGCGGTTACCAGACAGGGCAAGTCGGCGAGCAACATCCATATTGGCATCGGCGGCTGGAACTATGCGCCGTGGCGCGA TAACTTCTATCCGGCAGGTCTCGCGCAGGCACGCGAGCTGGAATATGCAAGCCGGCATCTGACCGCGATCGAGATCAACA GCACGTACCACGGCACGCAGAAGCGCACGTCGTTTGCGAACTGGCGCGACGCCACGCCCGATGGCTTCGTCTTCTCGGTC AAGGCTTCGCGCTTTGCGACCAATCGCCGCGTGCTGGCCGAAGGGAGTGATTCGATCAGCCGGTTCATCGACAGCGGCAT TGCCGAATTGCGCGAAAAACTGGGCCCGGTCGTCTGGCAGTTCGCACCGACCAAGCAGTTCGTGGCCGACGATTTCGAGG CCTTCCTGAACTTGTTGCCGACCTCGGTGGAGGGTGTGAAGCTGCGGCACGTGATGGAGGTGCGTCACGAGAGCTTCATG TGCGACGCGTACCTGAAGCTGGCGCGCAAGTTCAAGGCGGCCACCGTCTTCACCGACTCACCGAAGTTTCCGTCGTTCGC TGATCTCACTTCGGACTTCGTGTACGCGCGGCTGATGAACGCCGACGAGAAGGTCGCGACGGGCTATGCGCCGAAGGTGC TGGACCAATGGGCGCAGCGGGCATCGGCGTGGGCTGGCGGCAAGTCACCGGACGATCTGCCACGTGTGGAAGACGAACCC GCTGGCAAGCTCAAGCCGAAGGAAGCGTTCCTGTTCTTCATCAACGGCGCGAAGGAGCGCGCGCCGGCGGCGGCTGGCGC CTTGCTTGAGAGGCTTGGCTGGGTGCCGACCGAGGCAGTGCCGATGAAGGCTTCAACGCCGAAGCCGCCCGCCGCGAAGA AGATCGCGGTGGTCAAGACGGTGACCAGGAAGCCGGCGGCCACGAAGACCGTGGCGCGAAAGACTGCATGA
Upstream 100 bases:
>100_bases CTCGCCCACCGGCGTGTTTCGATTCACATGTCCGCGGGCTTCCGCCACGCCGCTCAATTCCGGCTAGACTTCCTCCACCA ATCCTCGCGGAGATCGGGTC
Downstream 100 bases:
>100_bases CGGTGTCTCTGCCATGCGCGTCACCAAGTTCTCCGCATCGATTCCGCTTTCGACCGGCACACTGTTTTCCGCGCTTCCGC TGGCGCCTGCGTTGCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAVTRQGKSASNIHIGIGGWNYAPWRDNFYPAGLAQARELEYASRHLTAIEINSTYHGTQKRTSFANWRDATPDGFVFSV KASRFATNRRVLAEGSDSISRFIDSGIAELREKLGPVVWQFAPTKQFVADDFEAFLNLLPTSVEGVKLRHVMEVRHESFM CDAYLKLARKFKAATVFTDSPKFPSFADLTSDFVYARLMNADEKVATGYAPKVLDQWAQRASAWAGGKSPDDLPRVEDEP AGKLKPKEAFLFFINGAKERAPAAAGALLERLGWVPTEAVPMKASTPKPPAAKKIAVVKTVTRKPAATKTVARKTA
Sequences:
>Translated_316_residues MAVTRQGKSASNIHIGIGGWNYAPWRDNFYPAGLAQARELEYASRHLTAIEINSTYHGTQKRTSFANWRDATPDGFVFSV KASRFATNRRVLAEGSDSISRFIDSGIAELREKLGPVVWQFAPTKQFVADDFEAFLNLLPTSVEGVKLRHVMEVRHESFM CDAYLKLARKFKAATVFTDSPKFPSFADLTSDFVYARLMNADEKVATGYAPKVLDQWAQRASAWAGGKSPDDLPRVEDEP AGKLKPKEAFLFFINGAKERAPAAAGALLERLGWVPTEAVPMKASTPKPPAAKKIAVVKTVTRKPAATKTVARKTA >Mature_315_residues AVTRQGKSASNIHIGIGGWNYAPWRDNFYPAGLAQARELEYASRHLTAIEINSTYHGTQKRTSFANWRDATPDGFVFSVK ASRFATNRRVLAEGSDSISRFIDSGIAELREKLGPVVWQFAPTKQFVADDFEAFLNLLPTSVEGVKLRHVMEVRHESFMC DAYLKLARKFKAATVFTDSPKFPSFADLTSDFVYARLMNADEKVATGYAPKVLDQWAQRASAWAGGKSPDDLPRVEDEPA GKLKPKEAFLFFINGAKERAPAAAGALLERLGWVPTEAVPMKASTPKPPAAKKIAVVKTVTRKPAATKTVARKTA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34825; Mature: 34694
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTRQGKSASNIHIGIGGWNYAPWRDNFYPAGLAQARELEYASRHLTAIEINSTYHGTQ CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCCH KRTSFANWRDATPDGFVFSVKASRFATNRRVLAEGSDSISRFIDSGIAELREKLGPVVWQ HHCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEE FAPTKQFVADDFEAFLNLLPTSVEGVKLRHVMEVRHESFMCDAYLKLARKFKAATVFTDS ECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC PKFPSFADLTSDFVYARLMNADEKVATGYAPKVLDQWAQRASAWAGGKSPDDLPRVEDEP CCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AGKLKPKEAFLFFINGAKERAPAAAGALLERLGWVPTEAVPMKASTPKPPAAKKIAVVKT CCCCCCCEEEEEEEECCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VTRKPAATKTVARKTA HHCCCCHHHHHHHCCC >Mature Secondary Structure AVTRQGKSASNIHIGIGGWNYAPWRDNFYPAGLAQARELEYASRHLTAIEINSTYHGTQ CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCCH KRTSFANWRDATPDGFVFSVKASRFATNRRVLAEGSDSISRFIDSGIAELREKLGPVVWQ HHCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEE FAPTKQFVADDFEAFLNLLPTSVEGVKLRHVMEVRHESFMCDAYLKLARKFKAATVFTDS ECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC PKFPSFADLTSDFVYARLMNADEKVATGYAPKVLDQWAQRASAWAGGKSPDDLPRVEDEP CCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AGKLKPKEAFLFFINGAKERAPAAAGALLERLGWVPTEAVPMKASTPKPPAAKKIAVVKT CCCCCCCEEEEEEEECCCHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VTRKPAATKTVARKTA HHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA