BacMap

Definition	Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession	NC_007973
Length	3,928,089

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The map label for this gene is dbpA [H]

Identifier: 94308960

GI number: 94308960

Start: 18848

End: 19531

Strand: Direct

Name: dbpA [H]

Synonym: Rmet_0015

Alternate gene names: 94308960

Gene position: 18848-19531 (Clockwise)

Preceding gene: 94308959

Following gene: 94308961

Centisome position: 0.48

GC content: 65.64

Gene sequence:

>684_bases
ATGCGCGTCACCAAGTTCTCCGCATCGATTCCGCTTTCGACCGGCACACTGTTTTCCGCGCTTCCGCTGGCGCCTGCGTT
GCAGGTGACGCTGACGGAACTCGGATGGCATGCCATCAATCCGCTTCAGGCGGCCATGCTGCCAGAGGCGCTGGCCGGCC
GCGACCTCATCGTGCAGGCGTCTCCCGGCAGCGGGCGTACCGTGGCCTTCACCGTTGCCCTGCTCCATCATCTCGATCCG
CGCCGGTTCGATGTGCAGGCGCTGGTGCTCTGCCCGACGCGCGAGCGCGTGCAGCATGTGGCCCAGTGCATCAGGGACTG
CGTGCGCGCCGCCCGGCACGTGAAGGTCGTGGCGCTGATGCATGGCGCGGCGATGCGTCCGCAGATCGACAGTCTGATCC
ACGGCGCGCATGTCGTGGTCGGCACACCGGGCAGGGTTGTCGACCACCTGGATGCCGGCAGCCTCGATCTGCGCGCGATC
GGCATCCTGGTGATCGACGACGCCGAATCGATGCTCGACCTCGGACTTGTCGACGATGTCGGCTTTGCGGCGAGCCGATG
TCCGAAGAGCCGGCAGACGCTGTTGTTTTCCACATCGTTCAATAGCGACCTGGATCCCGAGGTGGAGCGGTTCTCCAGGC
TCTGGCTCAGGAAGCCGCGACGCATCGCTCACTTGCCGGATTGA

Upstream 100 bases:

>100_bases
CCGCCCGCCGCGAAGAAGATCGCGGTGGTCAAGACGGTGACCAGGAAGCCGGCGGCCACGAAGACCGTGGCGCGAAAGAC
TGCATGACGGTGTCTCTGCC

Downstream 100 bases:

>100_bases
CGCCGGGGTGCGTGCCCCATTCCGATGCGCGTTCTGCGTGAAACAAAGATTCGTGAAAGTCACCCTGTGAGTGCCGCGAT
TCCTTTGCTAATCTGAATGG

Product: ATP-dependent RNA helicase, specific for 23S rRNA (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQASPGSGRTVAFTVALLHHLDP
RRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALMHGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAI
GILVIDDAESMLDLGLVDDVGFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD

Sequences:

>Translated_227_residues
MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQASPGSGRTVAFTVALLHHLDP
RRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALMHGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAI
GILVIDDAESMLDLGLVDDVGFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD
>Mature_227_residues
MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQASPGSGRTVAFTVALLHHLDP
RRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALMHGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAI
GILVIDDAESMLDLGLVDDVGFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI164664518, Length=220, Percent_Identity=31.8181818181818, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI45446747, Length=226, Percent_Identity=33.1858407079646, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI45446743, Length=226, Percent_Identity=33.1858407079646, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI148613856, Length=178, Percent_Identity=33.7078651685393, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI38201710, Length=178, Percent_Identity=33.7078651685393, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI41327773, Length=200, Percent_Identity=32, Blast_Score=101, Evalue=5e-22,
Organism=Homo sapiens, GI13129006, Length=193, Percent_Identity=32.6424870466321, Blast_Score=100, Evalue=8e-22,
Organism=Homo sapiens, GI7661920, Length=225, Percent_Identity=29.7777777777778, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4758138, Length=180, Percent_Identity=32.7777777777778, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI50659095, Length=193, Percent_Identity=33.160621761658, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI20149629, Length=209, Percent_Identity=31.1004784688995, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI188035877, Length=205, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI41327776, Length=209, Percent_Identity=31.1004784688995, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI262231852, Length=219, Percent_Identity=30.1369863013699, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI13518015, Length=219, Percent_Identity=30.1369863013699, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI216548263, Length=219, Percent_Identity=30.1369863013699, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI9506931, Length=211, Percent_Identity=31.7535545023697, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI262118318, Length=219, Percent_Identity=30.1369863013699, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI4503529, Length=210, Percent_Identity=30.952380952381, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI83700235, Length=209, Percent_Identity=31.1004784688995, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI31542656, Length=191, Percent_Identity=33.5078534031414, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI224593278, Length=209, Percent_Identity=31.1004784688995, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4758112, Length=196, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI18375623, Length=196, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI21040371, Length=196, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI21071032, Length=215, Percent_Identity=27.906976744186, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI41327779, Length=215, Percent_Identity=28.8372093023256, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI13514831, Length=212, Percent_Identity=29.2452830188679, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI38327634, Length=194, Percent_Identity=29.3814432989691, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI55749865, Length=198, Percent_Identity=30.8080808080808, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI41327771, Length=238, Percent_Identity=27.7310924369748, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI222352149, Length=217, Percent_Identity=28.110599078341, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI17505907, Length=197, Percent_Identity=28.9340101522843, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI20336298, Length=197, Percent_Identity=28.9340101522843, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI51094101, Length=204, Percent_Identity=26.4705882352941, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI164419743, Length=204, Percent_Identity=26.4705882352941, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI6005743, Length=217, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI256223453, Length=197, Percent_Identity=25.8883248730964, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI8922886, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI169881239, Length=182, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI13514809, Length=182, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI87196351, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI301171467, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI301171475, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI164419732, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI154759257, Length=173, Percent_Identity=31.7919075144509, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787605, Length=186, Percent_Identity=46.2365591397849, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI87082221, Length=208, Percent_Identity=39.4230769230769, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI1787016, Length=200, Percent_Identity=34.5, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1790214, Length=197, Percent_Identity=31.4720812182741, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788930, Length=180, Percent_Identity=29.4444444444444, Blast_Score=85, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71987143, Length=205, Percent_Identity=31.7073170731707, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71995724, Length=203, Percent_Identity=32.0197044334975, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17552114, Length=218, Percent_Identity=28.8990825688073, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17507121, Length=203, Percent_Identity=31.5270935960591, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193206561, Length=207, Percent_Identity=27.0531400966184, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17555296, Length=209, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI115533224, Length=164, Percent_Identity=35.3658536585366, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71982862, Length=212, Percent_Identity=27.3584905660377, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71982858, Length=212, Percent_Identity=27.3584905660377, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17552642, Length=237, Percent_Identity=28.6919831223629, Blast_Score=90, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17510559, Length=242, Percent_Identity=28.5123966942149, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505370, Length=218, Percent_Identity=27.9816513761468, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86570094, Length=191, Percent_Identity=33.5078534031414, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32565321, Length=225, Percent_Identity=28.4444444444444, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17510307, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71995514, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17510309, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71999644, Length=167, Percent_Identity=27.5449101796407, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71999646, Length=167, Percent_Identity=27.5449101796407, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71995718, Length=207, Percent_Identity=30.4347826086957, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17537549, Length=191, Percent_Identity=27.7486910994764, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI115532546, Length=210, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532548, Length=210, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193208216, Length=205, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17507945, Length=223, Percent_Identity=26.9058295964126, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17509811, Length=187, Percent_Identity=27.807486631016, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17507877, Length=227, Percent_Identity=23.7885462555066, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17507879, Length=214, Percent_Identity=24.7663551401869, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17553716, Length=189, Percent_Identity=24.8677248677249, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320224, Length=210, Percent_Identity=30, Blast_Score=117, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323021, Length=209, Percent_Identity=33.0143540669856, Blast_Score=112, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6320041, Length=212, Percent_Identity=30.188679245283, Blast_Score=102, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6321856, Length=212, Percent_Identity=31.6037735849057, Blast_Score=100, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6319714, Length=199, Percent_Identity=30.1507537688442, Blast_Score=96, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321360, Length=209, Percent_Identity=29.1866028708134, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323947, Length=207, Percent_Identity=29.951690821256, Blast_Score=92, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324620, Length=193, Percent_Identity=30.0518134715026, Blast_Score=89, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6320449, Length=216, Percent_Identity=28.2407407407407, Blast_Score=89, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6320173, Length=189, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322427, Length=195, Percent_Identity=29.7435897435897, Blast_Score=86, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6324217, Length=184, Percent_Identity=29.3478260869565, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325138, Length=206, Percent_Identity=30.0970873786408, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321111, Length=198, Percent_Identity=24.2424242424242, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320119, Length=207, Percent_Identity=28.0193236714976, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323306, Length=215, Percent_Identity=26.046511627907, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6320400, Length=234, Percent_Identity=25.6410256410256, Blast_Score=78, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6322912, Length=183, Percent_Identity=32.2404371584699, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322323, Length=183, Percent_Identity=32.2404371584699, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324778, Length=211, Percent_Identity=27.9620853080569, Blast_Score=75, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6321963, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321267, Length=228, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24583279, Length=211, Percent_Identity=31.7535545023697, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583281, Length=213, Percent_Identity=31.4553990610329, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24582080, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24582078, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17136248, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24582075, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24585582, Length=208, Percent_Identity=32.2115384615385, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24642151, Length=197, Percent_Identity=32.48730964467, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24645031, Length=199, Percent_Identity=30.6532663316583, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24644487, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI45551833, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644485, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281361218, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644481, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644483, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21356161, Length=212, Percent_Identity=30.6603773584906, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24644479, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI17977678, Length=217, Percent_Identity=29.9539170506912, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24662330, Length=189, Percent_Identity=32.2751322751323, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21355075, Length=222, Percent_Identity=28.8288288288288, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI17136814, Length=188, Percent_Identity=35.6382978723404, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574962, Length=182, Percent_Identity=32.967032967033, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281365720, Length=181, Percent_Identity=32.5966850828729, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571338, Length=228, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI18859659, Length=228, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI18857967, Length=179, Percent_Identity=30.1675977653631, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28575014, Length=217, Percent_Identity=29.4930875576037, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24584399, Length=208, Percent_Identity=27.8846153846154, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571808, Length=194, Percent_Identity=28.8659793814433, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI28571809, Length=194, Percent_Identity=28.8659793814433, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24581954, Length=197, Percent_Identity=28.4263959390863, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24581952, Length=197, Percent_Identity=28.4263959390863, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24581956, Length=197, Percent_Identity=28.4263959390863, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24584994, Length=228, Percent_Identity=27.1929824561404, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI17985987, Length=182, Percent_Identity=31.8681318681319, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI17647335, Length=187, Percent_Identity=28.3422459893048, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355559, Length=214, Percent_Identity=28.9719626168224, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24642822, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24643725, Length=210, Percent_Identity=27.1428571428571, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 24702; Mature: 24702

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQA
CCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEEE
SPGSGRTVAFTVALLHHLDPRRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALM
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEHH
HGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAIGILVIDDAESMLDLGLVDDV
HCCCCCCHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCC
GFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD
CHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQA
CCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEEE
SPGSGRTVAFTVALLHHLDPRRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALM
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEHH
HGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAIGILVIDDAESMLDLGLVDDV
HCCCCCCHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCC
GFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD
CHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]