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The map label for this gene is yegE [H]

Identifier: 335055620

GI number: 335055620

Start: 2892491

End: 2893210

Strand: Reverse

Name: yegE [H]

Synonym: NA

Alternate gene names: 335055620

Gene position: 2893210-2892491 (Counterclockwise)

Preceding gene: 335055621

Following gene: 335055619

Centisome position: 73.65

GC content: 65.69

Gene sequence:

>720_bases
ATGCGATCTGGTGACCGATCTAGTGCCACGCGCGCTGCGCTGGCCGGGACGTGGCCGAGCCAGACTGTCACGGTGCTGAG
CCGGCGTTCGGCGGGCGAGTCTTCGGCGAGAGTGGTCGTCAAACCTTCCGTGGCGCTGATCCGGGACAAGGTTGGGCAGG
CCATCGGCGTGGTGGTCGTGCTCCACGACGTCAGCCTGGAACGCGCGCAGGCGGCCCAGCTGGCCTATGAAGCCAGCCAT
GATCCGTTGACCGGGCTGGTGAATCGGCCCGAGTTCGAGCGCAGGCTCGAAACGGCAATCTTGCGGGCCCGGCAGGAGGG
GTGCACGCACACGCTGATGTACCTCGACCTGGATCGGTTCAAGGCTGTCAATGATACGTGTGGCCATGCCGCCGGAGACG
AACTGCTCTGCCAGATCGCCGATCTCATGCGCCAGCAGCTACGCCGTAGCGATACGCTGGCGCGGTTGGGTGGCGACGAA
TTCGCGGTGCTGCTCGAACACTGCTTGCCGAGTGATGGCGAACGGGTGGCGGAATCCCTGCGTCAGGCGATTGCTGCGTT
CCGCTTTATCTGCCGGGGGCATGTGTTCTCGGTCGCCGTCAGCGTGGGGCTGATCCGGCTCGATGAGCGGACCTCCAACA
CGGAAGACGCGCTCGGCGCCGCCGATGTGGCCTGTTATCGGGCCAAGCGTGCCGGACGCAATCGCGTGGAGGTCAGCTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: putative sensory box protein/GGDEF family protein

Products: NA

Alternate protein names: DGC [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:
NA

Sequences:

>Translated_239_residues
MRSGDRSSATRAALAGTWPSQTVTVLSRRSAGESSARVVVKPSVALIRDKVGQAIGVVVVLHDVSLERAQAAQLAYEASH
DPLTGLVNRPEFERRLETAILRARQEGCTHTLMYLDLDRFKAVNDTCGHAAGDELLCQIADLMRQQLRRSDTLARLGGDE
FAVLLEHCLPSDGERVAESLRQAIAAFRFICRGHVFSVAVSVGLIRLDERTSNTEDALGAADVACYRAKRAGRNRVEVS
>Mature_239_residues
MRSGDRSSATRAALAGTWPSQTVTVLSRRSAGESSARVVVKPSVALIRDKVGQAIGVVVVLHDVSLERAQAAQLAYEASH
DPLTGLVNRPEFERRLETAILRARQEGCTHTLMYLDLDRFKAVNDTCGHAAGDELLCQIADLMRQQLRRSDTLARLGGDE
FAVLLEHCLPSDGERVAESLRQAIAAFRFICRGHVFSVAVSVGLIRLDERTSNTEDALGAADVACYRAKRAGRNRVEVS

Specific function: Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=214, Percent_Identity=42.0560747663551, Blast_Score=165, Evalue=2e-42,
Organism=Escherichia coli, GI1786584, Length=167, Percent_Identity=33.5329341317365, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081881, Length=180, Percent_Identity=32.2222222222222, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787262, Length=165, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI145693134, Length=164, Percent_Identity=32.9268292682927, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081977, Length=165, Percent_Identity=32.1212121212121, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787802, Length=187, Percent_Identity=30.4812834224599, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788956, Length=164, Percent_Identity=35.3658536585366, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87082007, Length=188, Percent_Identity=34.0425531914894, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87081974, Length=166, Percent_Identity=31.3253012048193, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787541, Length=173, Percent_Identity=34.6820809248555, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788085, Length=185, Percent_Identity=29.1891891891892, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787816, Length=164, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF05231 MASE1; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: =2.7.7.65 [H]

Molecular weight: Translated: 26039; Mature: 26039

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGDRSSATRAALAGTWPSQTVTVLSRRSAGESSARVVVKPSVALIRDKVGQAIGVVVV
CCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHEEE
LHDVSLERAQAAQLAYEASHDPLTGLVNRPEFERRLETAILRARQEGCTHTLMYLDLDRF
EECCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHEEEHHHH
KAVNDTCGHAAGDELLCQIADLMRQQLRRSDTLARLGGDEFAVLLEHCLPSDGERVAESL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
RQAIAAFRFICRGHVFSVAVSVGLIRLDERTSNTEDALGAADVACYRAKRAGRNRVEVS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSGDRSSATRAALAGTWPSQTVTVLSRRSAGESSARVVVKPSVALIRDKVGQAIGVVVV
CCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHEEE
LHDVSLERAQAAQLAYEASHDPLTGLVNRPEFERRLETAILRARQEGCTHTLMYLDLDRF
EECCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHEEEHHHH
KAVNDTCGHAAGDELLCQIADLMRQQLRRSDTLARLGGDEFAVLLEHCLPSDGERVAESL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
RQAIAAFRFICRGHVFSVAVSVGLIRLDERTSNTEDALGAADVACYRAKRAGRNRVEVS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7984428 [H]