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The map label for this gene is yegE [H]

Identifier: 335055621

GI number: 335055621

Start: 2893132

End: 2894508

Strand: Reverse

Name: yegE [H]

Synonym: NA

Alternate gene names: 335055621

Gene position: 2894508-2893132 (Counterclockwise)

Preceding gene: 94311592

Following gene: 335055620

Centisome position: 73.69

GC content: 64.34

Gene sequence:

>1377_bases
ATGCGGCGAGCTGGTGAAGGTAGTCTGCCGGCCGGTGAGCAAGTGTCGAGCCTCATCTGGCCGTTCGTTCCGGTGGTTGT
GGCGCTGGCCTTGTTCTGCATTGCCAGCGTGGATGTGCTATCTGCCGCGCGCAGCTTCGTCGCCGGGGAAAGCCTCTGGA
CCAAGGGACAGAAGGCGGCGGTCCTGCATTTGCTCAACTATTCCCGCAGCCAGCTCGATACCGATTACGACGCATACCTT
GCTGCCATCGCCGTGCCGCTTGGCGATCGTCAGGCGCGTATCGAACTGGAAAAGCATTCGCGCTATGACCATACGCGGGC
GGTCGAAGGGCTGCTGATCGGCGGCAATCATACCGACGACATCTCCGGAATGATCCGGCTCTACCGCACGTTCCGCGGCG
TCGCGGAGATCGACGAAGCTATCGAGATCTGGGCGGCAGCCGATGTCGATATCGCCCGGCTCGACACGCTGTCCCGGACA
TTGCGCGGGCGCTTTCGTGCTGGCGACTGCGATGCCCGCTGCGTGGCGCCTATCCGGCGCGAGATCGTCGATATCGACAA
TCGGCTGACACCCCAGGAGGCGGCATTCTCCTCGACTCTAGGCAGAGCTTCGCGGCGCGTGCGCGCGCTGCTGACGTGGA
GCTCGATTGCGGTGGCGGTGACGTTGCTTGCGTGGGTCACGTGGGTGTCACGCAGCATGATGATCAAGGAGCGGCAGCTA
CGCGCCGCACTGTCGACCAGTGAGGAACGCCTGCAACTGGCGGTGGCCGGCAGCAACGACGGCCTGTGGGACTGGCATCC
GCATCGCGGAGAACTCTATTTTTCCCCTCGGTGCGCGGAAATGCTCGGCTATCGCGCCAACGAACTCCCGCACGCGGTCG
AGACCTTGATGGCACTGACCCATCCCGATGACGTCACCGAGCTGGGGCGCCGCCTGTCGGGGCACATGCGCAAGGGCACC
CCGTATGACATCGAGCTGCGACTACGGAAGAAGGCAGGGGGATATCTTTGGACGCGGGCGCGGGGCCGCATGGTGCGCAG
CGCGGTTGGCAAGGCCGTGCGCATGGCAGGCTCGCTCAGCGACATCTCGGACCGGAAGCGCTTCGAGGCGCAATTGCATA
CGGAAAAGGAGCGGGCGCAGGTCACGCTCCAGGCAATTGGCGAGGCAGTGATCACGACCGATGTCTGGGGACGGATTGAC
TCGCTCAACCCGGTGGCCGAGGCGATGACGGGCTGGACCGAGGCCGAAGCCGCCGGTTGTTTCCTGCCTCAGGTTTGTCC
GCTGACCGATGAAGTTACATGCGATCTGGTGACCGATCTAGTGCCACGCGCGCTGCGCTGGCCGGGACGTGGCCGAGCCA
GACTGTCACGGTGCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: putative sensory box protein/GGDEF family protein

Products: NA

Alternate protein names: DGC [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:
NA

Sequences:

>Translated_458_residues
MRRAGEGSLPAGEQVSSLIWPFVPVVVALALFCIASVDVLSAARSFVAGESLWTKGQKAAVLHLLNYSRSQLDTDYDAYL
AAIAVPLGDRQARIELEKHSRYDHTRAVEGLLIGGNHTDDISGMIRLYRTFRGVAEIDEAIEIWAAADVDIARLDTLSRT
LRGRFRAGDCDARCVAPIRREIVDIDNRLTPQEAAFSSTLGRASRRVRALLTWSSIAVAVTLLAWVTWVSRSMMIKERQL
RAALSTSEERLQLAVAGSNDGLWDWHPHRGELYFSPRCAEMLGYRANELPHAVETLMALTHPDDVTELGRRLSGHMRKGT
PYDIELRLRKKAGGYLWTRARGRMVRSAVGKAVRMAGSLSDISDRKRFEAQLHTEKERAQVTLQAIGEAVITTDVWGRID
SLNPVAEAMTGWTEAEAAGCFLPQVCPLTDEVTCDLVTDLVPRALRWPGRGRARLSRC
>Mature_458_residues
MRRAGEGSLPAGEQVSSLIWPFVPVVVALALFCIASVDVLSAARSFVAGESLWTKGQKAAVLHLLNYSRSQLDTDYDAYL
AAIAVPLGDRQARIELEKHSRYDHTRAVEGLLIGGNHTDDISGMIRLYRTFRGVAEIDEAIEIWAAADVDIARLDTLSRT
LRGRFRAGDCDARCVAPIRREIVDIDNRLTPQEAAFSSTLGRASRRVRALLTWSSIAVAVTLLAWVTWVSRSMMIKERQL
RAALSTSEERLQLAVAGSNDGLWDWHPHRGELYFSPRCAEMLGYRANELPHAVETLMALTHPDDVTELGRRLSGHMRKGT
PYDIELRLRKKAGGYLWTRARGRMVRSAVGKAVRMAGSLSDISDRKRFEAQLHTEKERAQVTLQAIGEAVITTDVWGRID
SLNPVAEAMTGWTEAEAAGCFLPQVCPLTDEVTCDLVTDLVPRALRWPGRGRARLSRC

Specific function: Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=185, Percent_Identity=29.7297297297297, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF05231 MASE1; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: =2.7.7.65 [H]

Molecular weight: Translated: 50841; Mature: 50841

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAGEGSLPAGEQVSSLIWPFVPVVVALALFCIASVDVLSAARSFVAGESLWTKGQKAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
VLHLLNYSRSQLDTDYDAYLAAIAVPLGDRQARIELEKHSRYDHTRAVEGLLIGGNHTDD
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCCCHHHHHCEEEECCCCCHH
ISGMIRLYRTFRGVAEIDEAIEIWAAADVDIARLDTLSRTLRGRFRAGDCDARCVAPIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EIVDIDNRLTPQEAAFSSTLGRASRRVRALLTWSSIAVAVTLLAWVTWVSRSMMIKERQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAALSTSEERLQLAVAGSNDGLWDWHPHRGELYFSPRCAEMLGYRANELPHAVETLMALT
HHHHCCCHHHEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHHHHHHHHC
HPDDVTELGRRLSGHMRKGTPYDIELRLRKKAGGYLWTRARGRMVRSAVGKAVRMAGSLS
CCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCHH
DISDRKRFEAQLHTEKERAQVTLQAIGEAVITTDVWGRIDSLNPVAEAMTGWTEAEAAGC
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCC
FLPQVCPLTDEVTCDLVTDLVPRALRWPGRGRARLSRC
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MRRAGEGSLPAGEQVSSLIWPFVPVVVALALFCIASVDVLSAARSFVAGESLWTKGQKAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
VLHLLNYSRSQLDTDYDAYLAAIAVPLGDRQARIELEKHSRYDHTRAVEGLLIGGNHTDD
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCCCHHHHHCEEEECCCCCHH
ISGMIRLYRTFRGVAEIDEAIEIWAAADVDIARLDTLSRTLRGRFRAGDCDARCVAPIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EIVDIDNRLTPQEAAFSSTLGRASRRVRALLTWSSIAVAVTLLAWVTWVSRSMMIKERQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAALSTSEERLQLAVAGSNDGLWDWHPHRGELYFSPRCAEMLGYRANELPHAVETLMALT
HHHHCCCHHHEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHHHHHHHHC
HPDDVTELGRRLSGHMRKGTPYDIELRLRKKAGGYLWTRARGRMVRSAVGKAVRMAGSLS
CCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCHH
DISDRKRFEAQLHTEKERAQVTLQAIGEAVITTDVWGRIDSLNPVAEAMTGWTEAEAAGC
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCC
FLPQVCPLTDEVTCDLVTDLVPRALRWPGRGRARLSRC
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7984428 [H]