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The map label for this gene is pvdQ [H]

Identifier: 93007272

GI number: 93007272

Start: 3022981

End: 3025440

Strand: Direct

Name: pvdQ [H]

Synonym: Pcryo_2448

Alternate gene names: 93007272

Gene position: 3022981-3025440 (Clockwise)

Preceding gene: 93007270

Following gene: 93007273

Centisome position: 98.79

GC content: 43.5

Gene sequence:

>2460_bases
ATGAGCATCAAAGTGCTTAATCGGCGTGTGTACACGCTTACGTTATTAACGGCGGCAGTCTCATTGGGATTGTCTGGTTG
TTCGGATAGTGACAATCTTAGTAGCAATGGAAATACTAATGACACCTATGCAGTGGATATCCAGCGCACTGAGTTTGGTA
TCCCGCATATCACCGCTAAAGACTATAAGGGCTTGGGCTACGGTGTAGGTTATGCCTTTGCCGAAGATAATTTTTGTTCG
CTAGCGCGTGAAGTTGTCGTTGCTAGAGGTGAAAGCTTGCTTTATTTAGGGGCTCAAGGCAACGAAGGAAGCGACGTTTT
TTACACCTGGTATAACACCCCCGCCAGGCGTGCTGAATTTTTAGCAGCGCAAGACCCTGAAACTATCGATGCAGTCACAG
GCTATGCTGCAGGCTTTAGCCGTTATCTACGTGATACAGGTGTGGCTAACATTGATCCTGCTTGTGCCAATGCCGAATGG
GTACGTGAGATCACGCTAGATGATTTGTTGACGGTTTATGGCAAAGCCAACTTACGTGGTGGACTCTCTAACTTCGTCAG
ACAAATCGTAGACACAGCTCCCCCAGTGTCAGGTATCGTCATGGGTAGCTCTAGAATGAGTAGCCCTGAACCTATAGCAG
AGTCGGTTGAAAAATTCGATATGACGACTATTAATGTATTAGATGGGGGTAGTAACGCTTATGCCTTTGGTAGTGAAGTA
ACAGGTACTGATAGTGGCGTGATGTATGGCAATCCGCATGAACCATGGGAAGGCGTACAGCGTTTTTATGAGTTTCATAC
CACAATACCAGGTGAGCTTGACGTGATGGGTTCAGCTCAGCAAGGGCAACCTTTTATCAATATCGGCTTTAATAAAGACG
TGGCTTGGAGCCATACGGTATCGACTGCTAAGCGCTTTACGCTTTATCAGCTTAGTCTAGTCAAAGGTAATCCTTTTAAA
TACAACTATGTCAACAGCGCAGGCATGGTTGAACAACGTGACATTGAAACGGTTCCAGTCACTATTAAGATGCCAAACAA
TCAAACAATGACTCGAAACATATATGTTTCACAATATGGACCAATCTTAAACGCTAAACTACTTAATCCTAATTTACCAG
CATGGGGTGATGCTAATAACGTCGTTTATACTATCCGTGACGCGGCTTCTGAAAATCCAAGAGCACTTAATCAGTGGCGT
AGTATGAATATGGCCACTAGCGTTGAGGATCTCGTCGATAGAATGCAAAACATTCTAGGCCTAGGGTTTGTCAATACCAT
TGCTACTGATCGTAACGGTAAAGCGCTTTATGCTGATATTTCAACCGTACCTAATGTCACTAGAGAAAAGCTAGCAGCCT
GTAGTGCTAACGCTGGAGCTGCTCTTCCTCTGCTGATTGCCTCAGACTTACCTGCACTTAATGGTAGTACTGCTGCCTGT
GAATGGGGTAATGATGCTGACTCTCCGCAAGCGGGGATTTTTGGTGGTTCAAACTTACCATTCATAATACGTGATGATTA
TGCCCTTAATTCTAACGACAGTTATTGGCTCAGTAATGCAAAACAACCATTAACTGGATTCTCACCACTACTACAACGTA
ATTTAGTGTCTTTCGCTGGAGTATCAACTCCTGAAGCCACTCCATTGTCATTGCGGACTCGCATGGCGTTTACGCAAATC
TTGGATCGATTAGATAATAAAGATGGTTTAGGTGGTACTACTTTTAACATAAAAAATATGGAAGAAGTTGTCTATGGCAA
TCGTAGTTATGCGGCTGAACTGGTTCTCAATGATGTAATAGCTAATTGTAAAGAATTTCCTATATTACCTCTGACTGGCG
GTAGTACCATCGATGCCACTCAAGCATGTAATATCTTAGCTACTTGGGATCGTCGTAATAATCTTGATAGCAAAGGCGCT
CATATCTTTAGAAAATTTTGGACCAACCTTCGTGTTAGTGGACTTAATAATGCAGGATTCAGAACTCCTTTTAACGAAGC
CGATCCAGTGAATACACCACGTGATCTAATCATTAATGAGAACACGCGTAGAGCATTAGGTGACTCAATTGCTTACTTTA
ACAGTAAAAATATCGCGCTTGATGCCCCATTAGGCAGCTTGCAATTCGTTATTGATGCAGGCAAAAACGGTGAGAAAATT
CCTATGCATGGTGGCTTTGGTCCTGAAGGCGTTTTCAACGTCGCAAGCTCAAGTCAAAACAGCGATGGCACTTATGGTCC
AGTGACCAATGGTCCAACTTATATGCAATCAGTAACGTTTGATAGTAAAGGCCCTGTCGTTGAAGCACTGCTAGCCTTCT
CGCAAGCTGGTGATACGACTCGTCCTTTCCATCGTGATCAGACCCGTCGTTATTCTGCTAAAGACTGGATTCGTCTGCCT
TTTAGCGCTGGTGAAATATCTAAGCAAGCCATTGGCAATAAGATTCAATTAAGAGAATAA

Upstream 100 bases:

>100_bases
GCATGAGCAATAAAAGGAATTTATTGATCGTTTAAAGCATGTTGAATGATTTTCTGCTACATCTTTAAATAACACCAATT
AACCATGGATGGGTAAGCTT

Downstream 100 bases:

>100_bases
AATTAGCGTAATATTTGATAGTAATAGAAAAGACTTTAGGACAATCCTAGAGTCTTTTTTTCATCACCTAACTATACAAC
TTTATAGCTATGTGATTAGC

Product: peptidase S45, penicillin amidase

Products: NA

Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]

Number of amino acids: Translated: 819; Mature: 818

Protein sequence:

>819_residues
MSIKVLNRRVYTLTLLTAAVSLGLSGCSDSDNLSSNGNTNDTYAVDIQRTEFGIPHITAKDYKGLGYGVGYAFAEDNFCS
LAREVVVARGESLLYLGAQGNEGSDVFYTWYNTPARRAEFLAAQDPETIDAVTGYAAGFSRYLRDTGVANIDPACANAEW
VREITLDDLLTVYGKANLRGGLSNFVRQIVDTAPPVSGIVMGSSRMSSPEPIAESVEKFDMTTINVLDGGSNAYAFGSEV
TGTDSGVMYGNPHEPWEGVQRFYEFHTTIPGELDVMGSAQQGQPFINIGFNKDVAWSHTVSTAKRFTLYQLSLVKGNPFK
YNYVNSAGMVEQRDIETVPVTIKMPNNQTMTRNIYVSQYGPILNAKLLNPNLPAWGDANNVVYTIRDAASENPRALNQWR
SMNMATSVEDLVDRMQNILGLGFVNTIATDRNGKALYADISTVPNVTREKLAACSANAGAALPLLIASDLPALNGSTAAC
EWGNDADSPQAGIFGGSNLPFIIRDDYALNSNDSYWLSNAKQPLTGFSPLLQRNLVSFAGVSTPEATPLSLRTRMAFTQI
LDRLDNKDGLGGTTFNIKNMEEVVYGNRSYAAELVLNDVIANCKEFPILPLTGGSTIDATQACNILATWDRRNNLDSKGA
HIFRKFWTNLRVSGLNNAGFRTPFNEADPVNTPRDLIINENTRRALGDSIAYFNSKNIALDAPLGSLQFVIDAGKNGEKI
PMHGGFGPEGVFNVASSSQNSDGTYGPVTNGPTYMQSVTFDSKGPVVEALLAFSQAGDTTRPFHRDQTRRYSAKDWIRLP
FSAGEISKQAIGNKIQLRE

Sequences:

>Translated_819_residues
MSIKVLNRRVYTLTLLTAAVSLGLSGCSDSDNLSSNGNTNDTYAVDIQRTEFGIPHITAKDYKGLGYGVGYAFAEDNFCS
LAREVVVARGESLLYLGAQGNEGSDVFYTWYNTPARRAEFLAAQDPETIDAVTGYAAGFSRYLRDTGVANIDPACANAEW
VREITLDDLLTVYGKANLRGGLSNFVRQIVDTAPPVSGIVMGSSRMSSPEPIAESVEKFDMTTINVLDGGSNAYAFGSEV
TGTDSGVMYGNPHEPWEGVQRFYEFHTTIPGELDVMGSAQQGQPFINIGFNKDVAWSHTVSTAKRFTLYQLSLVKGNPFK
YNYVNSAGMVEQRDIETVPVTIKMPNNQTMTRNIYVSQYGPILNAKLLNPNLPAWGDANNVVYTIRDAASENPRALNQWR
SMNMATSVEDLVDRMQNILGLGFVNTIATDRNGKALYADISTVPNVTREKLAACSANAGAALPLLIASDLPALNGSTAAC
EWGNDADSPQAGIFGGSNLPFIIRDDYALNSNDSYWLSNAKQPLTGFSPLLQRNLVSFAGVSTPEATPLSLRTRMAFTQI
LDRLDNKDGLGGTTFNIKNMEEVVYGNRSYAAELVLNDVIANCKEFPILPLTGGSTIDATQACNILATWDRRNNLDSKGA
HIFRKFWTNLRVSGLNNAGFRTPFNEADPVNTPRDLIINENTRRALGDSIAYFNSKNIALDAPLGSLQFVIDAGKNGEKI
PMHGGFGPEGVFNVASSSQNSDGTYGPVTNGPTYMQSVTFDSKGPVVEALLAFSQAGDTTRPFHRDQTRRYSAKDWIRLP
FSAGEISKQAIGNKIQLRE
>Mature_818_residues
SIKVLNRRVYTLTLLTAAVSLGLSGCSDSDNLSSNGNTNDTYAVDIQRTEFGIPHITAKDYKGLGYGVGYAFAEDNFCSL
AREVVVARGESLLYLGAQGNEGSDVFYTWYNTPARRAEFLAAQDPETIDAVTGYAAGFSRYLRDTGVANIDPACANAEWV
REITLDDLLTVYGKANLRGGLSNFVRQIVDTAPPVSGIVMGSSRMSSPEPIAESVEKFDMTTINVLDGGSNAYAFGSEVT
GTDSGVMYGNPHEPWEGVQRFYEFHTTIPGELDVMGSAQQGQPFINIGFNKDVAWSHTVSTAKRFTLYQLSLVKGNPFKY
NYVNSAGMVEQRDIETVPVTIKMPNNQTMTRNIYVSQYGPILNAKLLNPNLPAWGDANNVVYTIRDAASENPRALNQWRS
MNMATSVEDLVDRMQNILGLGFVNTIATDRNGKALYADISTVPNVTREKLAACSANAGAALPLLIASDLPALNGSTAACE
WGNDADSPQAGIFGGSNLPFIIRDDYALNSNDSYWLSNAKQPLTGFSPLLQRNLVSFAGVSTPEATPLSLRTRMAFTQIL
DRLDNKDGLGGTTFNIKNMEEVVYGNRSYAAELVLNDVIANCKEFPILPLTGGSTIDATQACNILATWDRRNNLDSKGAH
IFRKFWTNLRVSGLNNAGFRTPFNEADPVNTPRDLIINENTRRALGDSIAYFNSKNIALDAPLGSLQFVIDAGKNGEKIP
MHGGFGPEGVFNVASSSQNSDGTYGPVTNGPTYMQSVTFDSKGPVVEALLAFSQAGDTTRPFHRDQTRRYSAKDWIRLPF
SAGEISKQAIGNKIQLRE

Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H

COG id: COG2366

COG function: function code R; Protein related to penicillin acylase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S45 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002692 [H]

Pfam domain/function: PF01804 Penicil_amidase [H]

EC number: =3.5.1.97 [H]

Molecular weight: Translated: 89052; Mature: 88920

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKVLNRRVYTLTLLTAAVSLGLSGCSDSDNLSSNGNTNDTYAVDIQRTEFGIPHITAK
CCEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DYKGLGYGVGYAFAEDNFCSLAREVVVARGESLLYLGAQGNEGSDVFYTWYNTPARRAEF
CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCHHHHHHH
LAAQDPETIDAVTGYAAGFSRYLRDTGVANIDPACANAEWVREITLDDLLTVYGKANLRG
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GLSNFVRQIVDTAPPVSGIVMGSSRMSSPEPIAESVEKFDMTTINVLDGGSNAYAFGSEV
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCEEECCCC
TGTDSGVMYGNPHEPWEGVQRFYEFHTTIPGELDVMGSAQQGQPFINIGFNKDVAWSHTV
CCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCHHHH
STAKRFTLYQLSLVKGNPFKYNYVNSAGMVEQRDIETVPVTIKMPNNQTMTRNIYVSQYG
HHHHHEEEEEEEEECCCCEEEEEECCCCCEECCCCCEEEEEEECCCCCEEEEEEEEECCC
PILNAKLLNPNLPAWGDANNVVYTIRDAASENPRALNQWRSMNMATSVEDLVDRMQNILG
CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGFVNTIATDRNGKALYADISTVPNVTREKLAACSANAGAALPLLIASDLPALNGSTAAC
CCHHHHHEECCCCCEEEEEHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEE
EWGNDADSPQAGIFGGSNLPFIIRDDYALNSNDSYWLSNAKQPLTGFSPLLQRNLVSFAG
ECCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCC
VSTPEATPLSLRTRMAFTQILDRLDNKDGLGGTTFNIKNMEEVVYGNRSYAAELVLNDVI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHH
ANCKEFPILPLTGGSTIDATQACNILATWDRRNNLDSKGAHIFRKFWTNLRVSGLNNAGF
HCHHHCCEEEECCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCC
RTPFNEADPVNTPRDLIINENTRRALGDSIAYFNSKNIALDAPLGSLQFVIDAGKNGEKI
CCCCCCCCCCCCCCCEEEECCHHHHHCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCC
PMHGGFGPEGVFNVASSSQNSDGTYGPVTNGPTYMQSVTFDSKGPVVEALLAFSQAGDTT
CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
RPFHRDQTRRYSAKDWIRLPFSAGEISKQAIGNKIQLRE
CCCCCCHHHCCCCCCEEECCCCCCHHHHHHCCCEEEECC
>Mature Secondary Structure 
SIKVLNRRVYTLTLLTAAVSLGLSGCSDSDNLSSNGNTNDTYAVDIQRTEFGIPHITAK
CEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DYKGLGYGVGYAFAEDNFCSLAREVVVARGESLLYLGAQGNEGSDVFYTWYNTPARRAEF
CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCHHHHHHH
LAAQDPETIDAVTGYAAGFSRYLRDTGVANIDPACANAEWVREITLDDLLTVYGKANLRG
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GLSNFVRQIVDTAPPVSGIVMGSSRMSSPEPIAESVEKFDMTTINVLDGGSNAYAFGSEV
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCEEECCCC
TGTDSGVMYGNPHEPWEGVQRFYEFHTTIPGELDVMGSAQQGQPFINIGFNKDVAWSHTV
CCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCHHHH
STAKRFTLYQLSLVKGNPFKYNYVNSAGMVEQRDIETVPVTIKMPNNQTMTRNIYVSQYG
HHHHHEEEEEEEEECCCCEEEEEECCCCCEECCCCCEEEEEEECCCCCEEEEEEEEECCC
PILNAKLLNPNLPAWGDANNVVYTIRDAASENPRALNQWRSMNMATSVEDLVDRMQNILG
CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGFVNTIATDRNGKALYADISTVPNVTREKLAACSANAGAALPLLIASDLPALNGSTAAC
CCHHHHHEECCCCCEEEEEHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEE
EWGNDADSPQAGIFGGSNLPFIIRDDYALNSNDSYWLSNAKQPLTGFSPLLQRNLVSFAG
ECCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCC
VSTPEATPLSLRTRMAFTQILDRLDNKDGLGGTTFNIKNMEEVVYGNRSYAAELVLNDVI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHH
ANCKEFPILPLTGGSTIDATQACNILATWDRRNNLDSKGAHIFRKFWTNLRVSGLNNAGF
HCHHHCCEEEECCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCC
RTPFNEADPVNTPRDLIINENTRRALGDSIAYFNSKNIALDAPLGSLQFVIDAGKNGEKI
CCCCCCCCCCCCCCCEEEECCHHHHHCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCC
PMHGGFGPEGVFNVASSSQNSDGTYGPVTNGPTYMQSVTFDSKGPVVEALLAFSQAGDTT
CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
RPFHRDQTRRYSAKDWIRLPFSAGEISKQAIGNKIQLRE
CCCCCCHHHCCCCCCEEECCCCCCHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA