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The map label for this gene is yycB [H]

Identifier: 93007257

GI number: 93007257

Start: 3006368

End: 3007687

Strand: Direct

Name: yycB [H]

Synonym: Pcryo_2433

Alternate gene names: 93007257

Gene position: 3006368-3007687 (Clockwise)

Preceding gene: 93007256

Following gene: 93007258

Centisome position: 98.25

GC content: 47.73

Gene sequence:

>1320_bases
ATGACGTGTCCTTTTTCTTATTCTAATAATAGTCGTGCTGCCATGTCTACCTCTCCTAATGTGCAAAATGATTTGCCTTT
ACAGTCTCAGACGGATAAGCCTTTGCCGTTTCAGCTGCCCTCTTCGCGCTTTACGTTTTGGCTGGTGCTATGTGCCATGA
TTCTATTGGCGACCAATATGCGCTCGCCCATTGTGGCACTAGGTTCTATAGCGCCGGTGGTTCAAGGAGCGCTCAATATC
TCCGAAACCCAAATTGGCTGGCTTGGCGCGGTGCCGATGCTGACTTTTGCACTTGGGGCTTTTATTTCGCCAGCGATTGG
TAAGCGTTTTGGGCTTGAAAACACTTTAATTGCGATGATTAGCCTCCTAACAATAGGTATGATTATTCGCAGCCTTATTC
CCACTTGGATGGGGTTTTTGGGCGGCACATTACTGTTGACGTTAGCGATTGGTTTTGCTAATACCCTTGCGGCGCCTGTT
ATCAAGCAACGTACGCCCAATCATATTCCTTTAGTTACTGGATTATTCAGTCTCACTATGACCGTGTCGGCAGGGATTGT
CGCGGGCGTGGTCTTGCCATTATCTGAGCAAGTAGGCTGGCAATGGGCGCTTGGTGGTTGGTCGATTTTGGGCGTCTTTG
CCTTAATAATATGGGTACTGCTACGACTGCGTTTGGGTTCTTCAAACCATCAGCCCGTAGTACCGCTTGCTGAAGGCGTT
CAAGCCCCATCGCCCATCTCTATGTGGCGCACACCCTTTGCTTGGCAAATTGCGATATTTATGGGCTTACAATCGCTGCT
TTTTTATACGGCTGCCAGTTTTTTACCGTCGATTTGGCTCAGTAAAGGCTTGTCAGCAGTAAGCGCGGGACAGATGAACT
CGGTATTCCAGTTTATGGCACCTGTGGCGATTTTAAGCTTAACATGGTTGGTCAATCGTGGACGACCTATTCAGGCACTG
GCGGTACTTGCAGCGGTTTTAAATGTGATTGGTATCTTAGGTGTCAGCTATTTATCTGCTGATTTGGCGTGGTTGTGGTC
GGCGCTGATGGGCATTGGTTGTTCAGCGATTTTTACCTTAAGTATGATGCTGTTTTCAATGCGTACTTATACCGCCAATC
AATCAAGTGAGCTATCGGGTATGGCGCAAGCAGTCGGTTATTTGATTGCGTTTTTTGGTCCATTGGGGACTGGTTGGTTA
CATGAAGCAACGGATAGCTGGGATTTGCCCTTATTGATTATGCTGATATTGATGGTGGTAAACGTAGGATTTGCATGGCT
GGTCAGCCGTCCGGTGATGGTCGATGGGAAGAAGGTTTAG

Upstream 100 bases:

>100_bases
TCTGCCAATATTTCGATATTCTATTTTTTCGTCTCACTCATCTTCTTTGTGAGATTTTTTCGGTGTTATTTTGCAAGCGA
CGACTCTTCGGCGCTGTTTA

Downstream 100 bases:

>100_bases
TTTTTATCATTAATCGATTAACTTTTGCACCATATTGCTGTTTATCTGATTCTGCTAGACTGGCTCTATTGCCTATAGGA
CAGCAGAATTATGATGAACA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTCPFSYSNNSRAAMSTSPNVQNDLPLQSQTDKPLPFQLPSSRFTFWLVLCAMILLATNMRSPIVALGSIAPVVQGALNI
SETQIGWLGAVPMLTFALGAFISPAIGKRFGLENTLIAMISLLTIGMIIRSLIPTWMGFLGGTLLLTLAIGFANTLAAPV
IKQRTPNHIPLVTGLFSLTMTVSAGIVAGVVLPLSEQVGWQWALGGWSILGVFALIIWVLLRLRLGSSNHQPVVPLAEGV
QAPSPISMWRTPFAWQIAIFMGLQSLLFYTAASFLPSIWLSKGLSAVSAGQMNSVFQFMAPVAILSLTWLVNRGRPIQAL
AVLAAVLNVIGILGVSYLSADLAWLWSALMGIGCSAIFTLSMMLFSMRTYTANQSSELSGMAQAVGYLIAFFGPLGTGWL
HEATDSWDLPLLIMLILMVVNVGFAWLVSRPVMVDGKKV

Sequences:

>Translated_439_residues
MTCPFSYSNNSRAAMSTSPNVQNDLPLQSQTDKPLPFQLPSSRFTFWLVLCAMILLATNMRSPIVALGSIAPVVQGALNI
SETQIGWLGAVPMLTFALGAFISPAIGKRFGLENTLIAMISLLTIGMIIRSLIPTWMGFLGGTLLLTLAIGFANTLAAPV
IKQRTPNHIPLVTGLFSLTMTVSAGIVAGVVLPLSEQVGWQWALGGWSILGVFALIIWVLLRLRLGSSNHQPVVPLAEGV
QAPSPISMWRTPFAWQIAIFMGLQSLLFYTAASFLPSIWLSKGLSAVSAGQMNSVFQFMAPVAILSLTWLVNRGRPIQAL
AVLAAVLNVIGILGVSYLSADLAWLWSALMGIGCSAIFTLSMMLFSMRTYTANQSSELSGMAQAVGYLIAFFGPLGTGWL
HEATDSWDLPLLIMLILMVVNVGFAWLVSRPVMVDGKKV
>Mature_438_residues
TCPFSYSNNSRAAMSTSPNVQNDLPLQSQTDKPLPFQLPSSRFTFWLVLCAMILLATNMRSPIVALGSIAPVVQGALNIS
ETQIGWLGAVPMLTFALGAFISPAIGKRFGLENTLIAMISLLTIGMIIRSLIPTWMGFLGGTLLLTLAIGFANTLAAPVI
KQRTPNHIPLVTGLFSLTMTVSAGIVAGVVLPLSEQVGWQWALGGWSILGVFALIIWVLLRLRLGSSNHQPVVPLAEGVQ
APSPISMWRTPFAWQIAIFMGLQSLLFYTAASFLPSIWLSKGLSAVSAGQMNSVFQFMAPVAILSLTWLVNRGRPIQALA
VLAAVLNVIGILGVSYLSADLAWLWSALMGIGCSAIFTLSMMLFSMRTYTANQSSELSGMAQAVGYLIAFFGPLGTGWLH
EATDSWDLPLLIMLILMVVNVGFAWLVSRPVMVDGKKV

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=384, Percent_Identity=30.2083333333333, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1786536, Length=386, Percent_Identity=24.3523316062176, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47188; Mature: 47057

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TCPFSYSNNSRAAMSTSPNVQNDLPLQSQTDKPLPFQLPSSRFTFWLVLCAMILLATNM
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RSPIVALGSIAPVVQGALNISETQIGWLGAVPMLTFALGAFISPAIGKRFGLENTLIAMI
CCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SLLTIGMIIRSLIPTWMGFLGGTLLLTLAIGFANTLAAPVIKQRTPNHIPLVTGLFSLTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TVSAGIVAGVVLPLSEQVGWQWALGGWSILGVFALIIWVLLRLRLGSSNHQPVVPLAEGV
HHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
QAPSPISMWRTPFAWQIAIFMGLQSLLFYTAASFLPSIWLSKGLSAVSAGQMNSVFQFMA
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
PVAILSLTWLVNRGRPIQALAVLAAVLNVIGILGVSYLSADLAWLWSALMGIGCSAIFTL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SMMLFSMRTYTANQSSELSGMAQAVGYLIAFFGPLGTGWLHEATDSWDLPLLIMLILMVV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHH
NVGFAWLVSRPVMVDGKKV
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]