| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93007192
Identifier: 93007192
GI number: 93007192
Start: 2908103
End: 2909563
Strand: Direct
Name: 93007192
Synonym: Pcryo_2368
Alternate gene names: NA
Gene position: 2908103-2909563 (Clockwise)
Preceding gene: 93007186
Following gene: 93007193
Centisome position: 95.04
GC content: 38.12
Gene sequence:
>1461_bases ATGTCACTGACTATAGATAGTCCGCCAAATGCGGCGGCACTTATGCACTCTTTGCGAGATATTGGATATGAGTTAGATAC AGCTTTGGCAGACATTATTGACAATAGTATTACTGCAGGAGCAAGCGAGGTCCACATTACTTTTGAGACGGATCCCGTAA CTAAGGTTGCTATCTTAGATAATGGTGATGGCATGAGTCGGGATGAACTCATAAAGGCGATGACGATTGGATCAAAAAGC CCTCTAATTGAGCGCTCTACTAAAGACTTAGGAAGATTTGGTCTAGGTTTAAAAACAGCTTCTTTCTCACAGTGTAAACG TTTAACAGTAGTTACTAGACAGTTTGATCAGACGTGGGCAATGTGTTGGGATTTGGATCAAGTCACTAAATCTAATTGCT GGGATTTAATACAGCTTGGCGATGACGCGATGGTAGAGATCTATCAGTTCGATCAACTGGAAGACACAGGTACTTTAGTA GTCTGGGAGATTTGTGACCGTCTGCAAGGTGACGGAAATCGCAGCAATGATAACCATGTATTGCAAAAGTTTGATAATGC CGAAAAATATCTAGGACTGATATTTCACCGGTTTTTAGATAAGTCACCAAGTTCTGTATCGAATTTAGACATTGTTATTA ACGGTAGAGCAATTAGCTACGTGGACCCCTTCTTTCGCCATAAACCTGCCACTCAGGTCCACAACCTTGAAACTATCAAA TATAAAGACGTATACATTAAGGTGCAAGGCTATACCCTACCCCACCATACAAAATGTACCAAAGAAGAGTATGACAAATA TTCTTTAGGTAGCTATCGAGATAGCCAAGGATTCTACGTATATCGAGCTAATAGACTTCTTATAGCAGGTGATTGGTTTC GATTAGCTGCAAAATCAGACTTAACCTCTCTAACACGAATCGAAATTGATCTACCTAATAACTTTGATAGTGAATGGCAT ATTGATATTAAAAAATCACATGCCAAGCCACCTGAGCAAATGCGAGATCAACTTAAGCAATATATCGACACCTATATTCA AGGATCTAAACGTGTTTATAACTCTAAAGGTTATAGACACAAAGGAGATGTCACCCCACTTTGGCATCAATATACCAATA AAAATTTACGCTCTTATCAAATTAATAAAGACTATCCATTAATTTCACAGTTTATGGAAGGTTTAGATGTTAGGCAAACA AGTCAGCTTAAACAGATACTTATTTTAATTGAGGAAAGTTTCCCAGTTGACCAGTTGTATGTGGACTACGCTTCTTCTCC CAAAGAGTTTAAAACCAAACACACCGATGAAGAACTTGAGGAGCTAGCGCTCAGTTATCTTGAAAATTTTTCTAATATTG GGTTTGAGATAAGCGATATAACACTTCTTTTAGAAAAAAATGCACCTTTTAGTGATTACAGCAGAGACTGGGAAAGCTAT CTAAAAACATCAAAGGAATAA
Upstream 100 bases:
>100_bases CATTGATTTTTAATGCAGCCAAATAAATCGATATAACTAAAACCAAAATAATAAACTTTTTTTCTGAAAAACTTTATATT AAAAATTGGAAGTTTTAAAT
Downstream 100 bases:
>100_bases ATCATGAATACGGATATGATTAATCTCATTTACAGTATCAGTGTTAAATTGCTAGAGCTGAACACTAATTTGAGTGTTTC TGAAGCAGTAAGTGAAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Mismatch Repair; Conserved Hypothethical Protein; Acetate/Butyrate Kinase Domain-Containing Protein; Type II Restriction- System Methylation Subunit
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSLTIDSPPNAAALMHSLRDIGYELDTALADIIDNSITAGASEVHITFETDPVTKVAILDNGDGMSRDELIKAMTIGSKS PLIERSTKDLGRFGLGLKTASFSQCKRLTVVTRQFDQTWAMCWDLDQVTKSNCWDLIQLGDDAMVEIYQFDQLEDTGTLV VWEICDRLQGDGNRSNDNHVLQKFDNAEKYLGLIFHRFLDKSPSSVSNLDIVINGRAISYVDPFFRHKPATQVHNLETIK YKDVYIKVQGYTLPHHTKCTKEEYDKYSLGSYRDSQGFYVYRANRLLIAGDWFRLAAKSDLTSLTRIEIDLPNNFDSEWH IDIKKSHAKPPEQMRDQLKQYIDTYIQGSKRVYNSKGYRHKGDVTPLWHQYTNKNLRSYQINKDYPLISQFMEGLDVRQT SQLKQILILIEESFPVDQLYVDYASSPKEFKTKHTDEELEELALSYLENFSNIGFEISDITLLLEKNAPFSDYSRDWESY LKTSKE
Sequences:
>Translated_486_residues MSLTIDSPPNAAALMHSLRDIGYELDTALADIIDNSITAGASEVHITFETDPVTKVAILDNGDGMSRDELIKAMTIGSKS PLIERSTKDLGRFGLGLKTASFSQCKRLTVVTRQFDQTWAMCWDLDQVTKSNCWDLIQLGDDAMVEIYQFDQLEDTGTLV VWEICDRLQGDGNRSNDNHVLQKFDNAEKYLGLIFHRFLDKSPSSVSNLDIVINGRAISYVDPFFRHKPATQVHNLETIK YKDVYIKVQGYTLPHHTKCTKEEYDKYSLGSYRDSQGFYVYRANRLLIAGDWFRLAAKSDLTSLTRIEIDLPNNFDSEWH IDIKKSHAKPPEQMRDQLKQYIDTYIQGSKRVYNSKGYRHKGDVTPLWHQYTNKNLRSYQINKDYPLISQFMEGLDVRQT SQLKQILILIEESFPVDQLYVDYASSPKEFKTKHTDEELEELALSYLENFSNIGFEISDITLLLEKNAPFSDYSRDWESY LKTSKE >Mature_485_residues SLTIDSPPNAAALMHSLRDIGYELDTALADIIDNSITAGASEVHITFETDPVTKVAILDNGDGMSRDELIKAMTIGSKSP LIERSTKDLGRFGLGLKTASFSQCKRLTVVTRQFDQTWAMCWDLDQVTKSNCWDLIQLGDDAMVEIYQFDQLEDTGTLVV WEICDRLQGDGNRSNDNHVLQKFDNAEKYLGLIFHRFLDKSPSSVSNLDIVINGRAISYVDPFFRHKPATQVHNLETIKY KDVYIKVQGYTLPHHTKCTKEEYDKYSLGSYRDSQGFYVYRANRLLIAGDWFRLAAKSDLTSLTRIEIDLPNNFDSEWHI DIKKSHAKPPEQMRDQLKQYIDTYIQGSKRVYNSKGYRHKGDVTPLWHQYTNKNLRSYQINKDYPLISQFMEGLDVRQTS QLKQILILIEESFPVDQLYVDYASSPKEFKTKHTDEELEELALSYLENFSNIGFEISDITLLLEKNAPFSDYSRDWESYL KTSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55976; Mature: 55844
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTIDSPPNAAALMHSLRDIGYELDTALADIIDNSITAGASEVHITFETDPVTKVAILD CEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEE NGDGMSRDELIKAMTIGSKSPLIERSTKDLGRFGLGLKTASFSQCKRLTVVTRQFDQTWA CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MCWDLDQVTKSNCWDLIQLGDDAMVEIYQFDQLEDTGTLVVWEICDRLQGDGNRSNDNHV HHHCHHHHHHCCCHHHHHCCCCHHEEEEECCCCCCCCCEEEEHHHHHHCCCCCCCCCHHH LQKFDNAEKYLGLIFHRFLDKSPSSVSNLDIVINGRAISYVDPFFRHKPATQVHNLETIK HHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCHHHHCCCCCHHCCCEEEE YKDVYIKVQGYTLPHHTKCTKEEYDKYSLGSYRDSQGFYVYRANRLLIAGDWFRLAAKSD EEEEEEEEEEEECCCCCCCCHHHCCCCCCCCEECCCCEEEEEECEEEEEECHHEEHHHCC LTSLTRIEIDLPNNFDSEWHIDIKKSHAKPPEQMRDQLKQYIDTYIQGSKRVYNSKGYRH CCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC KGDVTPLWHQYTNKNLRSYQINKDYPLISQFMEGLDVRQTSQLKQILILIEESFPVDQLY CCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE VDYASSPKEFKTKHTDEELEELALSYLENFSNIGFEISDITLLLEKNAPFSDYSRDWESY EECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHHHHHH LKTSKE HHCCCC >Mature Secondary Structure SLTIDSPPNAAALMHSLRDIGYELDTALADIIDNSITAGASEVHITFETDPVTKVAILD EEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEE NGDGMSRDELIKAMTIGSKSPLIERSTKDLGRFGLGLKTASFSQCKRLTVVTRQFDQTWA CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MCWDLDQVTKSNCWDLIQLGDDAMVEIYQFDQLEDTGTLVVWEICDRLQGDGNRSNDNHV HHHCHHHHHHCCCHHHHHCCCCHHEEEEECCCCCCCCCEEEEHHHHHHCCCCCCCCCHHH LQKFDNAEKYLGLIFHRFLDKSPSSVSNLDIVINGRAISYVDPFFRHKPATQVHNLETIK HHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCHHHHCCCCCHHCCCEEEE YKDVYIKVQGYTLPHHTKCTKEEYDKYSLGSYRDSQGFYVYRANRLLIAGDWFRLAAKSD EEEEEEEEEEEECCCCCCCCHHHCCCCCCCCEECCCCEEEEEECEEEEEECHHEEHHHCC LTSLTRIEIDLPNNFDSEWHIDIKKSHAKPPEQMRDQLKQYIDTYIQGSKRVYNSKGYRH CCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC KGDVTPLWHQYTNKNLRSYQINKDYPLISQFMEGLDVRQTSQLKQILILIEESFPVDQLY CCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE VDYASSPKEFKTKHTDEELEELALSYLENFSNIGFEISDITLLLEKNAPFSDYSRDWESY EECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHHHHHH LKTSKE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA