| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93007193
Identifier: 93007193
GI number: 93007193
Start: 2909567
End: 2912254
Strand: Direct
Name: 93007193
Synonym: Pcryo_2369
Alternate gene names: NA
Gene position: 2909567-2912254 (Clockwise)
Preceding gene: 93007192
Following gene: 93007194
Centisome position: 95.09
GC content: 37.05
Gene sequence:
>2688_bases ATGAATACGGATATGATTAATCTCATTTACAGTATCAGTGTTAAATTGCTAGAGCTGAACACTAATTTGAGTGTTTCTGA AGCAGTAAGTGAAGCTATGAGCACATTTAATATAGATCAAATGAGCGAGCTGGATGTTTTCAATAATATCGTAAATAATT TAAATCTCTTTCGTAATACTAAGCAAGAGAATGCTCACGTATTGGATGATCAAGAAATCACGCCTTGGCTGCATACGGTC TCTAGTGATAAATATTATAGCGACCGCTATTACACCTATCTACAAAATGAAGAACGATTACCCGCAAGAGTCGTTGATGT CATGAAGCGCACTAATGAAGATATTTTAGAGCGATTAGGTAACCCAAATATAGATACGCCTTTCAAAAGGCAAGGTTTAG TAGTAGGAAATGTACAGTCGGGAAAAACGGCGAATTATCTATCATTGATAAACTTGGCAGCTGATTATGACTATAAGTTA ATTATCCTGATTACTGGCATTCACAATAACTTAAGATCACAAACTCAAAAGCGGGTTAATAAAGGATTTATAGGTGTCAA CAGTGAGGAGCAAAAACTTACAGGAGTTGGGGTTACTAATAACCCAGTGCTTGATAAAGAAATTAAAGCGAAACAGCCAC ACTGTTTAACAAGCTTAACTGAAGACTTTAGCGGAAAAATTCGTAAGACAACGGCAGTTCGATTGGAGAACGCTAAGAAC CCAGTCATCATGGTCATTAAGAAAAACCATCATACTTTAGGTAATGTGATTAAATGGCTGAGAAATAATGAACAGGGTCA ACGCTTTATTAACGAGCCTGTACTAATTATTGACGATGAAGCAGACAATGCTTCAATTAATACCAGTAAACATCCAAATG AGACGACAAAAATTAATGGGCAAATAAGAGAGACTTTTAACTTGTTTCGTCAGGGTTCTTATATCGGTTACACAGCCACC CCATTTGCGAATATATTTATAGATCCTGCCAACCACGATGAAGCTTTGGCAGACGATTTGTTTCCTAAGCATTTTATTTT TACGCTTGTACCACCATCGAATTATCTAGGCCCAGCCCAGTTTTTCTTAGGAGAAGATGGTGAGCCTAATTACGACTCTC CTTACGTAGAGTTCATCCAAGATAATGAAGATAGTATCCCGTTAAAAAAACCTAAAGACTTTGTTCTTACTGAACTTCCT AAAAGTTTGACTTTGGCGCTCTATGAGTACTTGGTAACTATCGTTATTAAAAGTGTACGCTCAGTTAGTAATAAACATAC ATCAATGCTGATCAATATATCTCATAAAACTCAAGAGCAAGCTGACGCACAATATCTAGTTAGCCAAACGTTAGAAGAAA TCAGACTAGCGGTAAAATTTCATGGTGCTAAACCACAGCAAGAGCGTCTGAAAAACCCACATTTAGAGGGCTTGTACCGC AAGTTCTTACCTCACTTAAATAAACAGAACGTTGATGAGCTTTTTACTCAGCTACAAAAAGTCATCGATTCAGTTAAAGT AAGAGTAATAAATAGTGAGAGTAAAGATAAATTAGATTACGATAATTATGAGAACGGTCTAAATGTCATTGCTATCGGTG GATACAGTCTATCACGTGGATTTACTCTAGAAGGATTAACTATAAGCTACCTAATACGTAATACCGCCATGGCAGATACG TTATTGCAGATGGGACGATGGTTTGGCTACCGTGAACAGTATGATGATCTCTGTAAGCTATATATTCCTGACGCTTCATT CGAATGGTATGCATTCATTGCTCAATCTATTGAAGAATTGCGCTCAGAGTTTTCTATTATGGAACAAAATGGTCTGACGC CAGCAGAGTTTGGTTTAAAAGTTAGAACTAGTAATACTGGGCTATTAATTACTGCACGCAACAAAATGCATCATACAGAG GCTGTTACGCTATCAGAAAGCTTTTCTGAAGAAGCTTTTACACTTCGTGGTATTGCACTAAACAATTTACTTAGTCAACG TAAATTATTTACTGATTTTGCGCTTAAATCTGCTGATTTATATGGCTTTAAGCCAGTTTACAACTATGTTAGAGCAGAAA ACGATAAGCAATTTCATTTGATTCAAAAAGTTGGCATTGACGAGGTTATCAACCTACTCAATGAGTATGAGCATTCAATC GATGATAATGGCAGGAAAGAGGCGCTGATATCCTATATTGAAGAACGAGAGGATGAGTTGGCAACTTGGGATATTGCAAT TCATAAAAGTTATTTAGGTGAAAACGCACTATCTCAGGTTCGTACTTTTGCAAAATCTTGCTATCACTCAGATCATGTCA AAACAGCTGACGGTGGTGGTCGTATTTTAAGACCATGGGAAGAAGCTTTTGGCTTAACAGATGAGCAGTACGCAAGTGCA GAACAACAAAAAGAGAAATCGAAAGTTAAACAAACCGCTCGATTCTATAGAAGAAATAGAAGTCGTCCTTTACTTGTACT CAAGTCTTTCGATCTTTATGTGGGGTCTAAAAAAGAAGGTGATAAAAAGGGTGACGATCCAAAATACCAAGATGTACCAG CATATGCGATTAGCTTTCCAAAATCCAGTAACCATAACCCTGTAAGCTACTTGGTTAATAAAGTCTTTATGGAAGACTAC TTTGGTGATGAAGATGAGTCAGACGAAATGGAGGAAGGCTATGAATAA
Upstream 100 bases:
>100_bases TGAGATAAGCGATATAACACTTCTTTTAGAAAAAAATGCACCTTTTAGTGATTACAGCAGAGACTGGGAAAGCTATCTAA AAACATCAAAGGAATAAATC
Downstream 100 bases:
>100_bases TCCAACTGATCTTCAAAGCTACTATACTGATCTGATGAATGAGCTCGACCATAGCTCGACCACGCAGGGTAACTACAAAG AGCTTTTATTCATTGAAAAG
Product: endonuclease
Products: NA
Alternate protein names: Endonuclease Z1 Domain Protein; Endonuclease Z1 Domain; Endonuclease Z1 Domain-Containing Protein; Conserved Hypothethical Protein; Z1 Domain-Containing Protein; Helicase; Stress-Sensitive Restriction System Protein
Number of amino acids: Translated: 895; Mature: 895
Protein sequence:
>895_residues MNTDMINLIYSISVKLLELNTNLSVSEAVSEAMSTFNIDQMSELDVFNNIVNNLNLFRNTKQENAHVLDDQEITPWLHTV SSDKYYSDRYYTYLQNEERLPARVVDVMKRTNEDILERLGNPNIDTPFKRQGLVVGNVQSGKTANYLSLINLAADYDYKL IILITGIHNNLRSQTQKRVNKGFIGVNSEEQKLTGVGVTNNPVLDKEIKAKQPHCLTSLTEDFSGKIRKTTAVRLENAKN PVIMVIKKNHHTLGNVIKWLRNNEQGQRFINEPVLIIDDEADNASINTSKHPNETTKINGQIRETFNLFRQGSYIGYTAT PFANIFIDPANHDEALADDLFPKHFIFTLVPPSNYLGPAQFFLGEDGEPNYDSPYVEFIQDNEDSIPLKKPKDFVLTELP KSLTLALYEYLVTIVIKSVRSVSNKHTSMLINISHKTQEQADAQYLVSQTLEEIRLAVKFHGAKPQQERLKNPHLEGLYR KFLPHLNKQNVDELFTQLQKVIDSVKVRVINSESKDKLDYDNYENGLNVIAIGGYSLSRGFTLEGLTISYLIRNTAMADT LLQMGRWFGYREQYDDLCKLYIPDASFEWYAFIAQSIEELRSEFSIMEQNGLTPAEFGLKVRTSNTGLLITARNKMHHTE AVTLSESFSEEAFTLRGIALNNLLSQRKLFTDFALKSADLYGFKPVYNYVRAENDKQFHLIQKVGIDEVINLLNEYEHSI DDNGRKEALISYIEEREDELATWDIAIHKSYLGENALSQVRTFAKSCYHSDHVKTADGGGRILRPWEEAFGLTDEQYASA EQQKEKSKVKQTARFYRRNRSRPLLVLKSFDLYVGSKKEGDKKGDDPKYQDVPAYAISFPKSSNHNPVSYLVNKVFMEDY FGDEDESDEMEEGYE
Sequences:
>Translated_895_residues MNTDMINLIYSISVKLLELNTNLSVSEAVSEAMSTFNIDQMSELDVFNNIVNNLNLFRNTKQENAHVLDDQEITPWLHTV SSDKYYSDRYYTYLQNEERLPARVVDVMKRTNEDILERLGNPNIDTPFKRQGLVVGNVQSGKTANYLSLINLAADYDYKL IILITGIHNNLRSQTQKRVNKGFIGVNSEEQKLTGVGVTNNPVLDKEIKAKQPHCLTSLTEDFSGKIRKTTAVRLENAKN PVIMVIKKNHHTLGNVIKWLRNNEQGQRFINEPVLIIDDEADNASINTSKHPNETTKINGQIRETFNLFRQGSYIGYTAT PFANIFIDPANHDEALADDLFPKHFIFTLVPPSNYLGPAQFFLGEDGEPNYDSPYVEFIQDNEDSIPLKKPKDFVLTELP KSLTLALYEYLVTIVIKSVRSVSNKHTSMLINISHKTQEQADAQYLVSQTLEEIRLAVKFHGAKPQQERLKNPHLEGLYR KFLPHLNKQNVDELFTQLQKVIDSVKVRVINSESKDKLDYDNYENGLNVIAIGGYSLSRGFTLEGLTISYLIRNTAMADT LLQMGRWFGYREQYDDLCKLYIPDASFEWYAFIAQSIEELRSEFSIMEQNGLTPAEFGLKVRTSNTGLLITARNKMHHTE AVTLSESFSEEAFTLRGIALNNLLSQRKLFTDFALKSADLYGFKPVYNYVRAENDKQFHLIQKVGIDEVINLLNEYEHSI DDNGRKEALISYIEEREDELATWDIAIHKSYLGENALSQVRTFAKSCYHSDHVKTADGGGRILRPWEEAFGLTDEQYASA EQQKEKSKVKQTARFYRRNRSRPLLVLKSFDLYVGSKKEGDKKGDDPKYQDVPAYAISFPKSSNHNPVSYLVNKVFMEDY FGDEDESDEMEEGYE >Mature_895_residues MNTDMINLIYSISVKLLELNTNLSVSEAVSEAMSTFNIDQMSELDVFNNIVNNLNLFRNTKQENAHVLDDQEITPWLHTV SSDKYYSDRYYTYLQNEERLPARVVDVMKRTNEDILERLGNPNIDTPFKRQGLVVGNVQSGKTANYLSLINLAADYDYKL IILITGIHNNLRSQTQKRVNKGFIGVNSEEQKLTGVGVTNNPVLDKEIKAKQPHCLTSLTEDFSGKIRKTTAVRLENAKN PVIMVIKKNHHTLGNVIKWLRNNEQGQRFINEPVLIIDDEADNASINTSKHPNETTKINGQIRETFNLFRQGSYIGYTAT PFANIFIDPANHDEALADDLFPKHFIFTLVPPSNYLGPAQFFLGEDGEPNYDSPYVEFIQDNEDSIPLKKPKDFVLTELP KSLTLALYEYLVTIVIKSVRSVSNKHTSMLINISHKTQEQADAQYLVSQTLEEIRLAVKFHGAKPQQERLKNPHLEGLYR KFLPHLNKQNVDELFTQLQKVIDSVKVRVINSESKDKLDYDNYENGLNVIAIGGYSLSRGFTLEGLTISYLIRNTAMADT LLQMGRWFGYREQYDDLCKLYIPDASFEWYAFIAQSIEELRSEFSIMEQNGLTPAEFGLKVRTSNTGLLITARNKMHHTE AVTLSESFSEEAFTLRGIALNNLLSQRKLFTDFALKSADLYGFKPVYNYVRAENDKQFHLIQKVGIDEVINLLNEYEHSI DDNGRKEALISYIEEREDELATWDIAIHKSYLGENALSQVRTFAKSCYHSDHVKTADGGGRILRPWEEAFGLTDEQYASA EQQKEKSKVKQTARFYRRNRSRPLLVLKSFDLYVGSKKEGDKKGDDPKYQDVPAYAISFPKSSNHNPVSYLVNKVFMEDY FGDEDESDEMEEGYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102406; Mature: 102406
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDMINLIYSISVKLLELNTNLSVSEAVSEAMSTFNIDQMSELDVFNNIVNNLNLFRNT CCCHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC KQENAHVLDDQEITPWLHTVSSDKYYSDRYYTYLQNEERLPARVVDVMKRTNEDILERLG CCCCCEECCCCCCCHHHHHCCCCCEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCC NPNIDTPFKRQGLVVGNVQSGKTANYLSLINLAADYDYKLIILITGIHNNLRSQTQKRVN CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHH KGFIGVNSEEQKLTGVGVTNNPVLDKEIKAKQPHCLTSLTEDFSGKIRKTTAVRLENAKN CCEECCCCCCCCEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHEEEEEEECCCC PVIMVIKKNHHTLGNVIKWLRNNEQGQRFINEPVLIIDDEADNASINTSKHPNETTKING CEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEECC QIRETFNLFRQGSYIGYTATPFANIFIDPANHDEALADDLFPKHFIFTLVPPSNYLGPAQ HHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCHH FFLGEDGEPNYDSPYVEFIQDNEDSIPLKKPKDFVLTELPKSLTLALYEYLVTIVIKSVR HHCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH SVSNKHTSMLINISHKTQEQADAQYLVSQTLEEIRLAVKFHGAKPQQERLKNPHLEGLYR HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH KFLPHLNKQNVDELFTQLQKVIDSVKVRVINSESKDKLDYDNYENGLNVIAIGGYSLSRG HHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCC FTLEGLTISYLIRNTAMADTLLQMGRWFGYREQYDDLCKLYIPDASFEWYAFIAQSIEEL CEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHH RSEFSIMEQNGLTPAEFGLKVRTSNTGLLITARNKMHHTEAVTLSESFSEEAFTLRGIAL HHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCCCCEEEEHHHCCCCHHEEHHHHH NNLLSQRKLFTDFALKSADLYGFKPVYNYVRAENDKQFHLIQKVGIDEVINLLNEYEHSI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHC DDNGRKEALISYIEEREDELATWDIAIHKSYLGENALSQVRTFAKSCYHSDHVKTADGGG CCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCCC RILRPWEEAFGLTDEQYASAEQQKEKSKVKQTARFYRRNRSRPLLVLKSFDLYVGSKKEG CEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCC DKKGDDPKYQDVPAYAISFPKSSNHNPVSYLVNKVFMEDYFGDEDESDEMEEGYE CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCC >Mature Secondary Structure MNTDMINLIYSISVKLLELNTNLSVSEAVSEAMSTFNIDQMSELDVFNNIVNNLNLFRNT CCCHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC KQENAHVLDDQEITPWLHTVSSDKYYSDRYYTYLQNEERLPARVVDVMKRTNEDILERLG CCCCCEECCCCCCCHHHHHCCCCCEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCC NPNIDTPFKRQGLVVGNVQSGKTANYLSLINLAADYDYKLIILITGIHNNLRSQTQKRVN CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHH KGFIGVNSEEQKLTGVGVTNNPVLDKEIKAKQPHCLTSLTEDFSGKIRKTTAVRLENAKN CCEECCCCCCCCEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHEEEEEEECCCC PVIMVIKKNHHTLGNVIKWLRNNEQGQRFINEPVLIIDDEADNASINTSKHPNETTKING CEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEECC QIRETFNLFRQGSYIGYTATPFANIFIDPANHDEALADDLFPKHFIFTLVPPSNYLGPAQ HHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCHH FFLGEDGEPNYDSPYVEFIQDNEDSIPLKKPKDFVLTELPKSLTLALYEYLVTIVIKSVR HHCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH SVSNKHTSMLINISHKTQEQADAQYLVSQTLEEIRLAVKFHGAKPQQERLKNPHLEGLYR HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH KFLPHLNKQNVDELFTQLQKVIDSVKVRVINSESKDKLDYDNYENGLNVIAIGGYSLSRG HHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEECCEEECCC FTLEGLTISYLIRNTAMADTLLQMGRWFGYREQYDDLCKLYIPDASFEWYAFIAQSIEEL CEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHH RSEFSIMEQNGLTPAEFGLKVRTSNTGLLITARNKMHHTEAVTLSESFSEEAFTLRGIAL HHHHHHHHHCCCCHHHHCEEEEECCCEEEEEECCCCCCCCEEEEHHHCCCCHHEEHHHHH NNLLSQRKLFTDFALKSADLYGFKPVYNYVRAENDKQFHLIQKVGIDEVINLLNEYEHSI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHC DDNGRKEALISYIEEREDELATWDIAIHKSYLGENALSQVRTFAKSCYHSDHVKTADGGG CCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECCCCC RILRPWEEAFGLTDEQYASAEQQKEKSKVKQTARFYRRNRSRPLLVLKSFDLYVGSKKEG CEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCC DKKGDDPKYQDVPAYAISFPKSSNHNPVSYLVNKVFMEDYFGDEDESDEMEEGYE CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA