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The map label for this gene is yraP [C]

Identifier: 93007021

GI number: 93007021

Start: 2700913

End: 2701758

Strand: Reverse

Name: yraP [C]

Synonym: Pcryo_2197

Alternate gene names: 93007021

Gene position: 2701758-2700913 (Counterclockwise)

Preceding gene: 93007022

Following gene: 93007020

Centisome position: 88.3

GC content: 45.27

Gene sequence:

>846_bases
ATGACACAGATGAATCTGCGCACTGCTATTTTTGGCGCACCGCGCCGTAACGCGATAGGCATTATATTAATGTCGAGCAT
TGTCACGACTGGCTGTACCACCAATTATTTGACCAATAGTACAGAAGGTACTTATGGCGTGCCCATGACTGAGCGCACTA
TTCCGCAGCGTCTGCTTGATCGTAGTATTGAGCATACCGTCAAGATTAACGTTTATGGTTTGCAGGAAAATTTGCAGCAA
ACCAGTCGCATGAGTATTGATAGCTTTAATAGTATTGTATTACTGACCGGTGAAGTGCCGACTGAAACAATTAAGGCAGA
AGTCAGTAAAGTCGTAGGCTCTATGCCAGATGTTCGTCAAGTCTATAATGAGCTGACAGTTGGTGCTTCAAAAGGCTATA
GCCAAACTGTCCATGACGGTTATATCACCTCAAAGCTGATGGCAAAAACAGCCGCTGCTGATGGGGTAAAAGCGTCACAA
ATTAGAGCAGTGACCAATAATGGCGTGGTTTATATCATGGGTCGTATGACACCGACGCAGCAAAGCCACCTGATTGATAT
TGCCAATAGCACGGTTGGTGTTACAGAATTGGTACTACTGACTACTGTCGTCGATGATCGAGGCGTAAAGCTGGGTAACG
ATGACATCATGTATGAGGCCAATGCTGCAAATTCAGCCCATCCAACTAGAGTTGCAGTCGTTAATAACAGAGCAATATCT
AATACTAGTGGTTCTGTCGCAGCAGATGCGACTATCAGTGCCACACCTATTATAGTGACCGAAGATGGCTCACCAGTTAC
CGAGCCTTCATCCAGCCCTTACATTGACCTGTATCAAAACCCATAG

Upstream 100 bases:

>100_bases
TAATTTTATTGAATCAAGTTTTTGTCATATTTGTTAAAATTACAACCATTGACTGTTGCTATTATTTATTATGAATACTC
ATGTACTAAAGAGGTAAATC

Downstream 100 bases:

>100_bases
ATTGAAGTGAATTAGATGAGTGATTAATCTTGACAAGATATTGTTATCTAATGCTAGTTTTATCTTAAAGTAGCCCAAAT
ATCACTCACAAGAACACTAA

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTQMNLRTAIFGAPRRNAIGIILMSSIVTTGCTTNYLTNSTEGTYGVPMTERTIPQRLLDRSIEHTVKINVYGLQENLQQ
TSRMSIDSFNSIVLLTGEVPTETIKAEVSKVVGSMPDVRQVYNELTVGASKGYSQTVHDGYITSKLMAKTAAADGVKASQ
IRAVTNNGVVYIMGRMTPTQQSHLIDIANSTVGVTELVLLTTVVDDRGVKLGNDDIMYEANAANSAHPTRVAVVNNRAIS
NTSGSVAADATISATPIIVTEDGSPVTEPSSSPYIDLYQNP

Sequences:

>Translated_281_residues
MTQMNLRTAIFGAPRRNAIGIILMSSIVTTGCTTNYLTNSTEGTYGVPMTERTIPQRLLDRSIEHTVKINVYGLQENLQQ
TSRMSIDSFNSIVLLTGEVPTETIKAEVSKVVGSMPDVRQVYNELTVGASKGYSQTVHDGYITSKLMAKTAAADGVKASQ
IRAVTNNGVVYIMGRMTPTQQSHLIDIANSTVGVTELVLLTTVVDDRGVKLGNDDIMYEANAANSAHPTRVAVVNNRAIS
NTSGSVAADATISATPIIVTEDGSPVTEPSSSPYIDLYQNP
>Mature_280_residues
TQMNLRTAIFGAPRRNAIGIILMSSIVTTGCTTNYLTNSTEGTYGVPMTERTIPQRLLDRSIEHTVKINVYGLQENLQQT
SRMSIDSFNSIVLLTGEVPTETIKAEVSKVVGSMPDVRQVYNELTVGASKGYSQTVHDGYITSKLMAKTAAADGVKASQI
RAVTNNGVVYIMGRMTPTQQSHLIDIANSTVGVTELVLLTTVVDDRGVKLGNDDIMYEANAANSAHPTRVAVVNNRAISN
TSGSVAADATISATPIIVTEDGSPVTEPSSSPYIDLYQNP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=174, Percent_Identity=24.7126436781609, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 30087; Mature: 29956

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMNLRTAIFGAPRRNAIGIILMSSIVTTGCTTNYLTNSTEGTYGVPMTERTIPQRLLD
CCCCCCEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RSIEHTVKINVYGLQENLQQTSRMSIDSFNSIVLLTGEVPTETIKAEVSKVVGSMPDVRQ
CCCCEEEEEEEEECHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHH
VYNELTVGASKGYSQTVHDGYITSKLMAKTAAADGVKASQIRAVTNNGVVYIMGRMTPTQ
HHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCEEEEEECCCCCC
QSHLIDIANSTVGVTELVLLTTVVDDRGVKLGNDDIMYEANAANSAHPTRVAVVNNRAIS
CCCEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCEEEEEEECCEEC
NTSGSVAADATISATPIIVTEDGSPVTEPSSSPYIDLYQNP
CCCCCEEECCEECCCEEEEECCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
TQMNLRTAIFGAPRRNAIGIILMSSIVTTGCTTNYLTNSTEGTYGVPMTERTIPQRLLD
CCCCCEEEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RSIEHTVKINVYGLQENLQQTSRMSIDSFNSIVLLTGEVPTETIKAEVSKVVGSMPDVRQ
CCCCEEEEEEEEECHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHH
VYNELTVGASKGYSQTVHDGYITSKLMAKTAAADGVKASQIRAVTNNGVVYIMGRMTPTQ
HHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCEEEEEECCCCCC
QSHLIDIANSTVGVTELVLLTTVVDDRGVKLGNDDIMYEANAANSAHPTRVAVVNNRAIS
CCCEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCCCCEEEEEEECCEEC
NTSGSVAADATISATPIIVTEDGSPVTEPSSSPYIDLYQNP
CCCCCEEECCEECCCEEEEECCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]