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The map label for this gene is yraN [C]

Identifier: 93007022

GI number: 93007022

Start: 2701985

End: 2702503

Strand: Reverse

Name: yraN [C]

Synonym: Pcryo_2198

Alternate gene names: 93007022

Gene position: 2702503-2701985 (Counterclockwise)

Preceding gene: 93007025

Following gene: 93007021

Centisome position: 88.32

GC content: 40.85

Gene sequence:

>519_bases
ATGATGTGCTATGATAATTCTGAAATGTTGAGCAGACTGATAGACGTCATGGCAAATGATAAACCTTTAATGCTAACCTC
TCCAAAACAGCGCCAAGGTAGCCGATTTGAGCAGCGGGCGTGTGAGTTTTTGCAAGAGCGAGGGTTGATTTTGGTTGCGC
AAAACTGGCAGCAGCCTAAAGTTGGCGAGCTTGATTTAGTGATGTTAGAAAAAGGACAAGCATGGTCGACACTGGTATTT
GTGGAAGTACGGCAAAGACAGCACTCATATTTTGGTGATGCGGCTATCAGCGTCACAGCAGGCAAGCAACGTAAAATTAT
CAAAGCAGCGCGTCATTTTTTACAGCAAAACCCTCAATATCATAAATATGAATGTCGGTTTGATGTGATTGCTTATAATA
CAATGAATAAAAAAAATAAAAATGAAGCCAATATCACGTTGGACAATCAACCAAATCAACGGTTAGAAATTAATCAGCCT
GAATGGCTACAAGGCGCATTTATCACGTCAGCTTGGTAA

Upstream 100 bases:

>100_bases
TGGCTAACAACATTAAAGGCAAAAATGCCTTATCAAATAAGGCTTAAGCACAGTGTAAAAAATTCTAGCAGTATCAACAC
GCGAAAGTGGTTAGTTTAGC

Downstream 100 bases:

>100_bases
TAAGACTTGTTTATGATTTATTTAAGCGTGGCTAATTTTATAATGTCAAAGCAAATTAAATGAAGTTGTCGTTACCAAAA
GCCTAACTGTAAGCAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MMCYDNSEMLSRLIDVMANDKPLMLTSPKQRQGSRFEQRACEFLQERGLILVAQNWQQPKVGELDLVMLEKGQAWSTLVF
VEVRQRQHSYFGDAAISVTAGKQRKIIKAARHFLQQNPQYHKYECRFDVIAYNTMNKKNKNEANITLDNQPNQRLEINQP
EWLQGAFITSAW

Sequences:

>Translated_172_residues
MMCYDNSEMLSRLIDVMANDKPLMLTSPKQRQGSRFEQRACEFLQERGLILVAQNWQQPKVGELDLVMLEKGQAWSTLVF
VEVRQRQHSYFGDAAISVTAGKQRKIIKAARHFLQQNPQYHKYECRFDVIAYNTMNKKNKNEANITLDNQPNQRLEINQP
EWLQGAFITSAW
>Mature_172_residues
MMCYDNSEMLSRLIDVMANDKPLMLTSPKQRQGSRFEQRACEFLQERGLILVAQNWQQPKVGELDLVMLEKGQAWSTLVF
VEVRQRQHSYFGDAAISVTAGKQRKIIKAARHFLQQNPQYHKYECRFDVIAYNTMNKKNKNEANITLDNQPNQRLEINQP
EWLQGAFITSAW

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=117, Percent_Identity=37.6068376068376, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2198_PSYCK (Q1Q8M8)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_581459.1
- ProteinModelPortal:   Q1Q8M8
- STRING:   Q1Q8M8
- GeneID:   4035025
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_2198
- NMPDR:   fig|335284.3.peg.2152
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EWLQGAF
- PhylomeDB:   Q1Q8M8
- ProtClustDB:   PRK14687
- BioCyc:   PCRY335284:PCRYO_2198-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 20095; Mature: 20095

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCYDNSEMLSRLIDVMANDKPLMLTSPKQRQGSRFEQRACEFLQERGLILVAQNWQQPK
CCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCCC
VGELDLVMLEKGQAWSTLVFVEVRQRQHSYFGDAAISVTAGKQRKIIKAARHFLQQNPQY
CCCEEEEEEECCCCCEEEEEEEEHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
HKYECRFDVIAYNTMNKKNKNEANITLDNQPNQRLEINQPEWLQGAFITSAW
CEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCC
>Mature Secondary Structure
MMCYDNSEMLSRLIDVMANDKPLMLTSPKQRQGSRFEQRACEFLQERGLILVAQNWQQPK
CCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCCC
VGELDLVMLEKGQAWSTLVFVEVRQRQHSYFGDAAISVTAGKQRKIIKAARHFLQQNPQY
CCCEEEEEEECCCCCEEEEEEEEHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
HKYECRFDVIAYNTMNKKNKNEANITLDNQPNQRLEINQPEWLQGAFITSAW
CEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA