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The map label for this gene is 93006996

Identifier: 93006996

GI number: 93006996

Start: 2664961

End: 2665626

Strand: Reverse

Name: 93006996

Synonym: Pcryo_2172

Alternate gene names: NA

Gene position: 2665626-2664961 (Counterclockwise)

Preceding gene: 93006997

Following gene: 93006995

Centisome position: 87.12

GC content: 45.5

Gene sequence:

>666_bases
ATGGCTCGTATTAACCTACTGCCCTGGCGAGAAGATGAGCGTGCCCGCCGCAATAAAGAGTTTATCACCTTAGTGGTGGC
AGTGACACTGTTGTCTCTGCTTGCAGCATTTGCGACGTGGAGTTATTTTAATAACGAACTTGCTGAACAATTAGATGCCA
ATGCACTGATTGAACAAGAAAACGCTCGCTTGGATAAAGCGTTGGTCGAGATTGATAGCTTAGAGCAGCGCCGTGAAGAT
ATCATCTCACGTATGCAAGTTATTCAAGACTTGCAAGGTCGACGTCCTGTACCTGTACGTTTATGGGATGATCTTGCTAA
AGCCATTCCGCCAGCGCTTTATTTGAATAATCTAAAACGTGAAGGGGATGTATTAACATTGACAGGTCTTGCTGACAATC
CAAACGTGGTATCAAGCTTGATCCGCAATCTTGATAGCAGTAAGTGGATGGGCGATTCAGCCGTAAGCAATATTCAGCAA
AACATTACCGCTTATCAAGCAGCCCCTGTTTTGGAAAATACGGTCACTACGCCAGGTGAACAACCGCGTCCTATTTATCC
TGAAGACAGCTATGTGCAGTTTGTAATCACGACTAAAGTACAGTCTGAAACGGCCGTGCCTGTAGAAGGTGCTGATGGCG
CTATTGTACCTGGAGGTGAGTTATGA

Upstream 100 bases:

>100_bases
TTAATATGACTATTGCGCCGCATATCGATCATGAGCAACTGGCGATTGATGCACCCAGCTTAATGGCCGCTTGCGGTCTG
GCGTTAAGGAGCTTTGACTA

Downstream 100 bases:

>100_bases
AACTGACCCGTAAAAAAACCCGCATTAAACTCAAAAAGACGGTGATAAGACAAAGAAAACAGTTTGATTTAAATGAGTTT
CGCCGCAGTTTTGAGTCATT

Product: fimbrial assembly

Products: NA

Alternate protein names: Fimbrial Assembly; Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Assembly Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type IV Pilus Biogenesis Fimbrial Assembly; LOW QUALITY PROTEIN Tfp Pilus Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Fimbriae Biogenesis-Like Protein; Fimbrial Assembly Protein PilN; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis PilN; Fimbrial Type-4 Assembly Transmembrane Protein; Type IV Pilus Assembly Protein Piln

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MARINLLPWREDERARRNKEFITLVVAVTLLSLLAAFATWSYFNNELAEQLDANALIEQENARLDKALVEIDSLEQRRED
IISRMQVIQDLQGRRPVPVRLWDDLAKAIPPALYLNNLKREGDVLTLTGLADNPNVVSSLIRNLDSSKWMGDSAVSNIQQ
NITAYQAAPVLENTVTTPGEQPRPIYPEDSYVQFVITTKVQSETAVPVEGADGAIVPGGEL

Sequences:

>Translated_221_residues
MARINLLPWREDERARRNKEFITLVVAVTLLSLLAAFATWSYFNNELAEQLDANALIEQENARLDKALVEIDSLEQRRED
IISRMQVIQDLQGRRPVPVRLWDDLAKAIPPALYLNNLKREGDVLTLTGLADNPNVVSSLIRNLDSSKWMGDSAVSNIQQ
NITAYQAAPVLENTVTTPGEQPRPIYPEDSYVQFVITTKVQSETAVPVEGADGAIVPGGEL
>Mature_220_residues
ARINLLPWREDERARRNKEFITLVVAVTLLSLLAAFATWSYFNNELAEQLDANALIEQENARLDKALVEIDSLEQRREDI
ISRMQVIQDLQGRRPVPVRLWDDLAKAIPPALYLNNLKREGDVLTLTGLADNPNVVSSLIRNLDSSKWMGDSAVSNIQQN
ITAYQAAPVLENTVTTPGEQPRPIYPEDSYVQFVITTKVQSETAVPVEGADGAIVPGGEL

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24622; Mature: 24491

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARINLLPWREDERARRNKEFITLVVAVTLLSLLAAFATWSYFNNELAEQLDANALIEQE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NARLDKALVEIDSLEQRREDIISRMQVIQDLQGRRPVPVRLWDDLAKAIPPALYLNNLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCC
EGDVLTLTGLADNPNVVSSLIRNLDSSKWMGDSAVSNIQQNITAYQAAPVLENTVTTPGE
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QPRPIYPEDSYVQFVITTKVQSETAVPVEGADGAIVPGGEL
CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARINLLPWREDERARRNKEFITLVVAVTLLSLLAAFATWSYFNNELAEQLDANALIEQE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NARLDKALVEIDSLEQRREDIISRMQVIQDLQGRRPVPVRLWDDLAKAIPPALYLNNLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCC
EGDVLTLTGLADNPNVVSSLIRNLDSSKWMGDSAVSNIQQNITAYQAAPVLENTVTTPGE
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QPRPIYPEDSYVQFVITTKVQSETAVPVEGADGAIVPGGEL
CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA