Click here to switch to the map view.

The map label for this gene is 93006997

Identifier: 93006997

GI number: 93006997

Start: 2665626

End: 2666681

Strand: Reverse

Name: 93006997

Synonym: Pcryo_2173

Alternate gene names: NA

Gene position: 2666681-2665626 (Counterclockwise)

Preceding gene: 93006999

Following gene: 93006996

Centisome position: 87.15

GC content: 45.45

Gene sequence:

>1056_bases
GTGAGGCTATTTACTTCTAAGAGTCGACATTTGATTGGCGTGGATATCTGTACCACCTCAGTGAAGTTGGTTGACATACA
GCGCCAACAAGGCGTTTTCCACCTAAGATCTTATGGTACTGAAATATTACCTGAAGGCGTAGTCATCGACAAACTCATTG
TAGACACGGAAGTGGTAGGCAATACTATAGCAGGCTTGGCAAGGCGTTGCCAAGCGGCGGGTAGTAGTGCAGCCACAGCA
GTCTCAGGATCAGCGGTGATTACTAAAATCATCGATATGGATATGGTGCTAAGTGACGTTGAGCGTGAAGCTCAAATTCG
TTTGGATGCTGACCAATACATACCTTATCCGCTAGAAGACGTCAATTTGGACTTTGAAGTATTGGGTCCCTCTCTTATTA
ATGATGACATGGTGCAAGTACTGCTTGCCGCCTCTCGTTCAGAAAACGTTGACCAAAGAGTTGATGCCTTAACCTTTGGT
GGTCTGCAAACCAAGGTAATGGATATTGAGTCGCATGCCATTGAGCGTGCTTTTGGCTTGATGGCAGACAGTCTGCCAAA
CTTGCCAGATTTGGTGGCGCTGGTTGATATCGGACACAATCAAACAACATTATATGTCGCCAAAAATGGCGAGTTTATCT
ATAGTCGTGAGCAGTTATTTGGAGGCAATCAGCTGACGGAAGCCATCCAAAACCGCTATGGTTTGTCTGCTGAAGAAGCT
TCTATTAGTAAGCGCGAGCGTGCTCTACCTGATGATTATTATACTGATGTCTTAACACCATTTATAGAAAATACCATCCA
ACAAATCACTCGCTCTTTACAGTTTTATTTCTCCTCAAGTCAATATAGTAGTATCGATCATGTGGTCCTTGCTGGTGGCA
GTAGCTCTATTGCGGGTCTTGCTGGTATGGCGCAGCAGCGATTGGGCGTGCCTGTGAGTATTGCAAATCCGTTCATTAAT
ATGACTATTGCGCCGCATATCGATCATGAGCAACTGGCGATTGATGCACCCAGCTTAATGGCCGCTTGCGGTCTGGCGTT
AAGGAGCTTTGACTAA

Upstream 100 bases:

>100_bases
AGGACATTTAAATGCTTGAATCTATCTGTTAAGTAAAGTATTGTACTAAATTATTACAAATAACTATCAGATTGTACACT
TAATATAAGGTATAGAGTTT

Downstream 100 bases:

>100_bases
TGGCTCGTATTAACCTACTGCCCTGGCGAGAAGATGAGCGTGCCCGCCGCAATAAAGAGTTTATCACCTTAGTGGTGGCA
GTGACACTGTTGTCTCTGCT

Product: type IV pilus assembly protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Fimbrial Assembly Protein PilM; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Protein FtsA; Type IV Pili Biogenesis Protein PilM; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein TapM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRLFTSKSRHLIGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVGNTIAGLARRCQAAGSSAATA
VSGSAVITKIIDMDMVLSDVEREAQIRLDADQYIPYPLEDVNLDFEVLGPSLINDDMVQVLLAASRSENVDQRVDALTFG
GLQTKVMDIESHAIERAFGLMADSLPNLPDLVALVDIGHNQTTLYVAKNGEFIYSREQLFGGNQLTEAIQNRYGLSAEEA
SISKRERALPDDYYTDVLTPFIENTIQQITRSLQFYFSSSQYSSIDHVVLAGGSSSIAGLAGMAQQRLGVPVSIANPFIN
MTIAPHIDHEQLAIDAPSLMAACGLALRSFD

Sequences:

>Translated_351_residues
MRLFTSKSRHLIGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVGNTIAGLARRCQAAGSSAATA
VSGSAVITKIIDMDMVLSDVEREAQIRLDADQYIPYPLEDVNLDFEVLGPSLINDDMVQVLLAASRSENVDQRVDALTFG
GLQTKVMDIESHAIERAFGLMADSLPNLPDLVALVDIGHNQTTLYVAKNGEFIYSREQLFGGNQLTEAIQNRYGLSAEEA
SISKRERALPDDYYTDVLTPFIENTIQQITRSLQFYFSSSQYSSIDHVVLAGGSSSIAGLAGMAQQRLGVPVSIANPFIN
MTIAPHIDHEQLAIDAPSLMAACGLALRSFD
>Mature_351_residues
MRLFTSKSRHLIGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVGNTIAGLARRCQAAGSSAATA
VSGSAVITKIIDMDMVLSDVEREAQIRLDADQYIPYPLEDVNLDFEVLGPSLINDDMVQVLLAASRSENVDQRVDALTFG
GLQTKVMDIESHAIERAFGLMADSLPNLPDLVALVDIGHNQTTLYVAKNGEFIYSREQLFGGNQLTEAIQNRYGLSAEEA
SISKRERALPDDYYTDVLTPFIENTIQQITRSLQFYFSSSQYSSIDHVVLAGGSSSIAGLAGMAQQRLGVPVSIANPFIN
MTIAPHIDHEQLAIDAPSLMAACGLALRSFD

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38210; Mature: 38210

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFTSKSRHLIGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVG
CCCCCCCCCCEEEEEEECCEEEEEEEHHHCCCHHHHHCCHHHCCCCEEHHHHHHHHHHHH
NTIAGLARRCQAAGSSAATAVSGSAVITKIIDMDMVLSDVEREAQIRLDADQYIPYPLED
HHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCHHEEEECHHHCCCCCHHH
VNLDFEVLGPSLINDDMVQVLLAASRSENVDQRVDALTFGGLQTKVMDIESHAIERAFGL
CCCCCEECCCHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCEEEEEEHHHHHHHHHHHH
MADSLPNLPDLVALVDIGHNQTTLYVAKNGEFIYSREQLFGGNQLTEAIQNRYGLSAEEA
HHHCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEHHHHCCCHHHHHHHHHHCCCCHHHH
SISKRERALPDDYYTDVLTPFIENTIQQITRSLQFYFSSSQYSSIDHVVLAGGSSSIAGL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
AGMAQQRLGVPVSIANPFINMTIAPHIDHEQLAIDAPSLMAACGLALRSFD
HHHHHHHCCCCEEECCCEEEEEEECCCCCHHEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLFTSKSRHLIGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVG
CCCCCCCCCCEEEEEEECCEEEEEEEHHHCCCHHHHHCCHHHCCCCEEHHHHHHHHHHHH
NTIAGLARRCQAAGSSAATAVSGSAVITKIIDMDMVLSDVEREAQIRLDADQYIPYPLED
HHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCHHEEEECHHHCCCCCHHH
VNLDFEVLGPSLINDDMVQVLLAASRSENVDQRVDALTFGGLQTKVMDIESHAIERAFGL
CCCCCEECCCHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCEEEEEEHHHHHHHHHHHH
MADSLPNLPDLVALVDIGHNQTTLYVAKNGEFIYSREQLFGGNQLTEAIQNRYGLSAEEA
HHHCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEHHHHCCCHHHHHHHHHHCCCCHHHH
SISKRERALPDDYYTDVLTPFIENTIQQITRSLQFYFSSSQYSSIDHVVLAGGSSSIAGL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
AGMAQQRLGVPVSIANPFINMTIAPHIDHEQLAIDAPSLMAACGLALRSFD
HHHHHHHCCCCEEECCCEEEEEEECCCCCHHEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA