Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 93006924

GI number: 93006924

Start: 2573579

End: 2573941

Strand: Reverse

Name: pilH [H]

Synonym: Pcryo_2100

Alternate gene names: 93006924

Gene position: 2573941-2573579 (Counterclockwise)

Preceding gene: 93006925

Following gene: 93006923

Centisome position: 84.12

GC content: 42.7

Gene sequence:

>363_bases
ATGACTACTGTATTAGTCATTGACGATTCACCATCTGAGATGGCGAAATTTCGCGACATGCTTTCTAAAAATAACTATCA
AGTATTGGAAGCGACCAATGGTGAACAAGGCTGCCAGATGGCCATTGCTCATCTACCAGACGTCATTTTGATGGATGTGG
TCATGCCTGAAATGAATGGTTTTCAGGCAACTCGTAAAATCACTCGTGACAAGGCAACAGCACATATTCCTATCATCATG
ATCAGTACCAAAAATCAAGAAACCGATCGTGTATGGGGCAAGCGTCAAGGCGCAAAAGAGTATCTTACCAAGCCTATTGA
TGAAAGCGGTCTGGTCCAGATCATTCGTAAAGTAATGGAGTAG

Upstream 100 bases:

>100_bases
ATCAGTAATATGCATTCAGTTCAGCATGAAATATTACTTCAATCGGTTTGTTTTAACACTATATATCTAACAGATATCAT
CGAAAATAAAGGAAATAACT

Downstream 100 bases:

>100_bases
CTTGTGGCATCGAGAGGATTTATTGAGCTTCTGCGTATAGCAGATATGGCACGTTCGCGTAAAAGCGGACGCCGCGGCGG
ACAAGAATTTGACTGGCAAG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTTVLVIDDSPSEMAKFRDMLSKNNYQVLEATNGEQGCQMAIAHLPDVILMDVVMPEMNGFQATRKITRDKATAHIPIIM
ISTKNQETDRVWGKRQGAKEYLTKPIDESGLVQIIRKVME

Sequences:

>Translated_120_residues
MTTVLVIDDSPSEMAKFRDMLSKNNYQVLEATNGEQGCQMAIAHLPDVILMDVVMPEMNGFQATRKITRDKATAHIPIIM
ISTKNQETDRVWGKRQGAKEYLTKPIDESGLVQIIRKVME
>Mature_119_residues
TTVLVIDDSPSEMAKFRDMLSKNNYQVLEATNGEQGCQMAIAHLPDVILMDVVMPEMNGFQATRKITRDKATAHIPIIMI
STKNQETDRVWGKRQGAKEYLTKPIDESGLVQIIRKVME

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=34.1880341880342, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1786911, Length=106, Percent_Identity=29.2452830188679, Blast_Score=63, Evalue=5e-12,
Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=28.448275862069, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=28.448275862069, Blast_Score=60, Evalue=4e-11,
Organism=Escherichia coli, GI2367329, Length=119, Percent_Identity=31.0924369747899, Blast_Score=59, Evalue=6e-11,
Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=29.0598290598291, Blast_Score=59, Evalue=8e-11,
Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=25.8620689655172, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13566; Mature: 13435

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVLVIDDSPSEMAKFRDMLSKNNYQVLEATNGEQGCQMAIAHLPDVILMDVVMPEMNG
CCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCC
FQATRKITRDKATAHIPIIMISTKNQETDRVWGKRQGAKEYLTKPIDESGLVQIIRKVME
HHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
TTVLVIDDSPSEMAKFRDMLSKNNYQVLEATNGEQGCQMAIAHLPDVILMDVVMPEMNG
CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCC
FQATRKITRDKATAHIPIIMISTKNQETDRVWGKRQGAKEYLTKPIDESGLVQIIRKVME
HHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]