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The map label for this gene is rhtB [C]

Identifier: 93006872

GI number: 93006872

Start: 2517619

End: 2518368

Strand: Reverse

Name: rhtB [C]

Synonym: Pcryo_2048

Alternate gene names: 93006872

Gene position: 2518368-2517619 (Counterclockwise)

Preceding gene: 93006873

Following gene: 93006870

Centisome position: 82.3

GC content: 43.07

Gene sequence:

>750_bases
ATGTCTTGGCATCTGTTTGCGGTATTTTTTGCAAGTACGTTTTTTATCTCAGCGACACCGGGCCCGAATATGCTACTGGC
ATTTCAATATGGGATTAATTACGGAGTCAAGCGGACATTATGGACGCTAGCAGGTCTCAGTCTTGGGCTCTTTATCCTGT
TGCTCTCAACGCTACTAGGCTTGGATGTCATTAGCCGTCAGTCACCATGGTTATTGACGGTCATTAAAACAGTCGGTGCC
CTTTACCTTGTTTATTTGGGTGTTGCATCGTGGCGTGATAGTGGCAGCAATAGTAGCTTAATGAATGACGCCAATGCTAT
GAGCGAAGAAATTAGCGCAGAGTTAACAACAAGCTCAAATCGCACTGATAGCATTCATAAATCTGAGACACTCAAGCCGC
GCTCGCTCTCTAGTGCTGCGGTCAAGATGGCACCTAGTAATGCTATGCTATTTCGCACAGGGATGTGGGTATCACTTTCT
AACCCAAAGGCGATTTTATTTTTTGCTGCCTTCTTTCCTAAGTTCATTAATTTTGGTGCGCCACTATGGCCGCAATATAT
TGTGCTTACCTTAGGACTGTTTCTCAGTGAGACGATTTGGCAGATAATATATACATTAGGCGGTAAAAAGCTGGCAGGGT
GGTTAGATGTTGGTAAGCGTTTAGCTTGGCTTAATCGTGGTTGCGGCATTATATTTATATTAATTGCAGCCGCTTTATTA
GCTGATGTGTTCAATAGTTTTATGATTTAA

Upstream 100 bases:

>100_bases
CGCAAGGTTTAGGTCGTGGTTGGTATAATAAACACCGTCTTTATGGCGGTGTTTATTTTTTCGTTCAGTCAGTTTAAAAT
AAAAAAGTAAGGGTTGGTTG

Downstream 100 bases:

>100_bases
AAGTCGCTATTAGTTATTCATATAAAGGCTAATGTTTAGTCATAAAAAAGCCGTTTACTATTGAATAGTGAACGGCTTTT
TTGGCTGTTTTATTTGCAAC

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: Homoserine/Homoserine Lactone Efflux Pump; Homoserine/Homoserine Lactone Efflux Protein

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSWHLFAVFFASTFFISATPGPNMLLAFQYGINYGVKRTLWTLAGLSLGLFILLLSTLLGLDVISRQSPWLLTVIKTVGA
LYLVYLGVASWRDSGSNSSLMNDANAMSEEISAELTTSSNRTDSIHKSETLKPRSLSSAAVKMAPSNAMLFRTGMWVSLS
NPKAILFFAAFFPKFINFGAPLWPQYIVLTLGLFLSETIWQIIYTLGGKKLAGWLDVGKRLAWLNRGCGIIFILIAAALL
ADVFNSFMI

Sequences:

>Translated_249_residues
MSWHLFAVFFASTFFISATPGPNMLLAFQYGINYGVKRTLWTLAGLSLGLFILLLSTLLGLDVISRQSPWLLTVIKTVGA
LYLVYLGVASWRDSGSNSSLMNDANAMSEEISAELTTSSNRTDSIHKSETLKPRSLSSAAVKMAPSNAMLFRTGMWVSLS
NPKAILFFAAFFPKFINFGAPLWPQYIVLTLGLFLSETIWQIIYTLGGKKLAGWLDVGKRLAWLNRGCGIIFILIAAALL
ADVFNSFMI
>Mature_248_residues
SWHLFAVFFASTFFISATPGPNMLLAFQYGINYGVKRTLWTLAGLSLGLFILLLSTLLGLDVISRQSPWLLTVIKTVGAL
YLVYLGVASWRDSGSNSSLMNDANAMSEEISAELTTSSNRTDSIHKSETLKPRSLSSAAVKMAPSNAMLFRTGMWVSLSN
PKAILFFAAFFPKFINFGAPLWPQYIVLTLGLFLSETIWQIIYTLGGKKLAGWLDVGKRLAWLNRGCGIIFILIAAALLA
DVFNSFMI

Specific function: Conducts The Efflux Of Homoserine And Homoserine Lactone. [C]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994979, Length=231, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27412; Mature: 27280

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWHLFAVFFASTFFISATPGPNMLLAFQYGINYGVKRTLWTLAGLSLGLFILLLSTLLG
CCHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDVISRQSPWLLTVIKTVGALYLVYLGVASWRDSGSNSSLMNDANAMSEEISAELTTSSN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RTDSIHKSETLKPRSLSSAAVKMAPSNAMLFRTGMWVSLSNPKAILFFAAFFPKFINFGA
CCCCCCHHCCCCCCCCCHHHHEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCC
PLWPQYIVLTLGLFLSETIWQIIYTLGGKKLAGWLDVGKRLAWLNRGCGIIFILIAAALL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ADVFNSFMI
HHHHHHHCC
>Mature Secondary Structure 
SWHLFAVFFASTFFISATPGPNMLLAFQYGINYGVKRTLWTLAGLSLGLFILLLSTLLG
CHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDVISRQSPWLLTVIKTVGALYLVYLGVASWRDSGSNSSLMNDANAMSEEISAELTTSSN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RTDSIHKSETLKPRSLSSAAVKMAPSNAMLFRTGMWVSLSNPKAILFFAAFFPKFINFGA
CCCCCCHHCCCCCCCCCHHHHEECCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCC
PLWPQYIVLTLGLFLSETIWQIIYTLGGKKLAGWLDVGKRLAWLNRGCGIIFILIAAALL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ADVFNSFMI
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA