| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006860
Identifier: 93006860
GI number: 93006860
Start: 2502084
End: 2502923
Strand: Reverse
Name: 93006860
Synonym: Pcryo_2036
Alternate gene names: NA
Gene position: 2502923-2502084 (Counterclockwise)
Preceding gene: 93006861
Following gene: 93006859
Centisome position: 81.8
GC content: 43.93
Gene sequence:
>840_bases ATGAATACGCATAATATATTAATTATCGGTCAAGGTGACATTGGATTACCAGTGACCAATAAGCTTGCGCAAGATGGCTT AATAGTCACTGGGCTGGCACGTCGTGAACGTCAAAATTATGCATTGAGCGATAATGCCAAATTTATGCAAGCAGATGCGT TGACGCTTAGCGCTGAGCAACTGCAAGACTTTACTCATATTGCTATCATCGTCACCCCTGATGAGTACTCAACCAATGGT TATCACAGTAGCTACTTGGCGATTAACCAGCATTTAGCGTTGCTTGCGGATAAACTATCCAATCTTCAGCGCATTGTTTT TATTTCTTCAACTGGCATCTATGGGCAAGATAACGGTGAATGGATCGATAAAGATACCGTGCCGATGCTGCCTAAACGCG AAGCATCACAGGTGATATTGCAAGCAGAGCAAATGCTGAAACAAGGTTTTGATAATAAAACAATTATCATCCGCCCAAGT GGTATTTATGGGCGCGAGCGCTTAATGCGTGTGCGAAAAGCTCAAGAGTCAGAGAAAAAGCCGATAGCAGCTGGCGTGTG GACCAATCGCATTATGGACTCTGATTTGGTCAATATTATCGCCAAGGTACTGACGATAGAGGTACCAAAGCCTGTTTATA TTGCAACCGATTATTTGCCAGTGACGTCCTTTACGCTGACCACTTGGCTATGTGAGCAACTGGGTGAAGCGCTGCCAGTA CTTGATGATAAGAATAGCGCCATGACCGGAAAGCGCCTACATAGCAATATTCCGTTAGCGTGGCTGACGTATCCTGATTG GCAAATGGGATATGAAGATATTTTGCGTCATCAGAATTAA
Upstream 100 bases:
>100_bases CGCATTGATGCCAATGACGATGTACAGCTGTCATATCGACGTTATTTTTAGCAGCCACCAGTATTTTTAGCAGCATCTTC AAAGGCAGGCAGGAATTATG
Downstream 100 bases:
>100_bases TAAATTAGCTATAGTGCTTAAATACGTTTTCAAATATATTGTTCATGAGTGCTGTTTTATAATAGCACTCACTTAGGGAG ATTTCATGACCCAGCCTTTT
Product: putative nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; ActC Family Protein; Epimerase/Dehydratase-Related Protein; Phosphate ABC Transporter Permease; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Dependent Epimerase/Dehydratase-Related Protein; Actc Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNTHNILIIGQGDIGLPVTNKLAQDGLIVTGLARRERQNYALSDNAKFMQADALTLSAEQLQDFTHIAIIVTPDEYSTNG YHSSYLAINQHLALLADKLSNLQRIVFISSTGIYGQDNGEWIDKDTVPMLPKREASQVILQAEQMLKQGFDNKTIIIRPS GIYGRERLMRVRKAQESEKKPIAAGVWTNRIMDSDLVNIIAKVLTIEVPKPVYIATDYLPVTSFTLTTWLCEQLGEALPV LDDKNSAMTGKRLHSNIPLAWLTYPDWQMGYEDILRHQN
Sequences:
>Translated_279_residues MNTHNILIIGQGDIGLPVTNKLAQDGLIVTGLARRERQNYALSDNAKFMQADALTLSAEQLQDFTHIAIIVTPDEYSTNG YHSSYLAINQHLALLADKLSNLQRIVFISSTGIYGQDNGEWIDKDTVPMLPKREASQVILQAEQMLKQGFDNKTIIIRPS GIYGRERLMRVRKAQESEKKPIAAGVWTNRIMDSDLVNIIAKVLTIEVPKPVYIATDYLPVTSFTLTTWLCEQLGEALPV LDDKNSAMTGKRLHSNIPLAWLTYPDWQMGYEDILRHQN >Mature_279_residues MNTHNILIIGQGDIGLPVTNKLAQDGLIVTGLARRERQNYALSDNAKFMQADALTLSAEQLQDFTHIAIIVTPDEYSTNG YHSSYLAINQHLALLADKLSNLQRIVFISSTGIYGQDNGEWIDKDTVPMLPKREASQVILQAEQMLKQGFDNKTIIIRPS GIYGRERLMRVRKAQESEKKPIAAGVWTNRIMDSDLVNIIAKVLTIEVPKPVYIATDYLPVTSFTLTTWLCEQLGEALPV LDDKNSAMTGKRLHSNIPLAWLTYPDWQMGYEDILRHQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31393; Mature: 31393
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTHNILIIGQGDIGLPVTNKLAQDGLIVTGLARRERQNYALSDNAKFMQADALTLSAEQ CCCCEEEEEECCCCCCCCCHHHHHCCEEEEEHHHHHHCCCEECCCCCEEEHHHEEEEHHH LQDFTHIAIIVTPDEYSTNGYHSSYLAINQHLALLADKLSNLQRIVFISSTGIYGQDNGE HCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC WIDKDTVPMLPKREASQVILQAEQMLKQGFDNKTIIIRPSGIYGRERLMRVRKAQESEKK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC PIAAGVWTNRIMDSDLVNIIAKVLTIEVPKPVYIATDYLPVTSFTLTTWLCEQLGEALPV CEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC LDDKNSAMTGKRLHSNIPLAWLTYPDWQMGYEDILRHQN CCCCCCCCCCHHHHCCCCEEEEECCCHHCCHHHHHCCCC >Mature Secondary Structure MNTHNILIIGQGDIGLPVTNKLAQDGLIVTGLARRERQNYALSDNAKFMQADALTLSAEQ CCCCEEEEEECCCCCCCCCHHHHHCCEEEEEHHHHHHCCCEECCCCCEEEHHHEEEEHHH LQDFTHIAIIVTPDEYSTNGYHSSYLAINQHLALLADKLSNLQRIVFISSTGIYGQDNGE HCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC WIDKDTVPMLPKREASQVILQAEQMLKQGFDNKTIIIRPSGIYGRERLMRVRKAQESEKK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC PIAAGVWTNRIMDSDLVNIIAKVLTIEVPKPVYIATDYLPVTSFTLTTWLCEQLGEALPV CEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC LDDKNSAMTGKRLHSNIPLAWLTYPDWQMGYEDILRHQN CCCCCCCCCCHHHHCCCCEEEEECCCHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA