| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006861
Identifier: 93006861
GI number: 93006861
Start: 2502973
End: 2505129
Strand: Reverse
Name: 93006861
Synonym: Pcryo_2037
Alternate gene names: NA
Gene position: 2505129-2502973 (Counterclockwise)
Preceding gene: 93006865
Following gene: 93006860
Centisome position: 81.87
GC content: 45.16
Gene sequence:
>2157_bases ATGTTCAAATTTTTAATGAACGTCCATCACGTGATAAGCGTATCACCTTTACAGTGCGAGATTTTACTTATGTCCATACA CTCAGTTTCAAATCGTATTGCGATAGATGGTACGCCAATACAGCTTAGCTGCCGTGCACGTTTGCCACTGGCGATAGCTG GACTGCTGCTAACTGTGCAAGCCCAGGCATTTTTACCAACGCCTGCATCACTGGTTACGACTGGTGAGCTTGCACTTAAT ACCGATACCAATACTAATACTAACAAGGCTAAAGCCGAAACAGATGCAAATCAGCTGCTAAATCTATGGCGTGAGCAGTC AACGACAAAAAATCTTGCCCAAGATACGACGTGGCGCCGCTTATTATATTTCTCTGATGAGAAAAAAGGCTTGTTTGGCA AAAATAAAAATATCAGTGCGGTCGATGATGCTCGCTTCTTTTTGAGCTCAAATGGGCGTGAGGATTCAGGTGCTGAGCTT GATGCCATGCTTGTTGCCTTTGCTGATGAGATGGCTAATAAAACCAATAATTCTGAAACTAATAATACTGCCCAAGCTAG TAATAGCAACTCTGCGCTATGCCGTTTCCCAGCAAGAGCAAAATGGCTAAGTGATACCTTGGCTATTGATAAGTCAGCGA TGCAGGTAACTTGTCCAGAGCTGACAGCTTGGATGCAAAAGCTTGCCCCTGAGCAGCTGTCTATTATGTTTGCCCAAGAG TACTTAGACAATCCTCTGTCTGCTTTTGCGCATACCTTGTTGCGTATCGATTCAAAAGCAAGTGTGGCTGATCTAAGCCA AATTCATCATGCTTATGCGCTAAATGATACGGTCGATGGCGATACCAAAGATAACTTTGTATTGTATGCCATCAAATCTA TGACGGGCGGCTATAACAATCTGATCGAGATTGACCCTTATCCAGAAAAGCTTGCTAAATATCTGCAAGACGATGAGCGT GATGCGTGGACATATCAATTGGATTTGACCCCAGAGGAAGTACAGCAAATCATATTGCACGTTTGGGAAACCAAAGAGTT AAAATTGCCCTATTACTTTACCTCTGACAATTGCGCCTCTGAGATTTTGCGCCTGATAGATGTGGTACGTCCAGAGCAGC ATTTATTAAGTCAGCTGCCTTATGCCGTTATTCCATCAGATGTGGTACAGCTGCTGAACAAAGAAGGTTTTCTTGCTAGC ACCAATTATACGCCGGCTGATAGTACTTTACGCCAAGCACAATTGAACAAAGTCAAACAGGAGAGTAAGCAGCTCGGCTA CCATAACAACCCCAAACAGATGCTTAATGAGATTAAGTCGGCCCAGCTCAATAAAGTTTCGAGCATGTCAGCTGATGGTC AGACGTTACTCCCTCACCAGATTGCGGTCTCAGATACCAATCCTCTCAATCGACATTCGCTGCAAATGGGCAGTATTGGT ATCGGTCAGCGCGGCGATAATAATTACATCGATCTTGGCGCGCGCGCAGGCTATCACGATACCCTTGATCATCCTTCTGG TTTTCCGCAGTTCTTTGATTTAGAAGGTGCTTCTGCGACTGTGCGTTTGTATGACACAGATATTGATAAAGCCAATCAGC CAAAAAGTGTGGTGTTACAGAATTTGACTTTGATTAAAGGGCGTTCTTTTAACCCTGTCAATTCGGCTAAGAAGGGCAAA ACCTGGGGCGCGAGTATAGAGGCCACGCGTGTAAACGATGGCTCGCAGCAAGACGGTACCGATCATTTAGTTGGAAGCTT GGGCTATGAGTCTGGTTGGTCATGGGCGTTTGGAACGCCTAGTGCAGGGACGGGCGAGATGCCGCCACAGCTTTGTTATA CCTTTTTGGCAGGTACCGCGCAAACGGGGCGTGGTATTAATAAAGGCTTTCGTGTCGGCGCAGGCGTAAACGCTGGCTGT CGTTATCAGATTAACAATCAGTTACGTGCGCAGGCTGAATTGCAATTGCCATATTGGTATCATGGCAGCAGCGACGACTC TAATGTGCGCGGTCATTATTGGCAGCCGATATCAAGCTTAGGGCTGCAATACGATATCGATAAAAAACAAGCATTACGTA TCAATGCCAATTATGAATGGCAAGATCGCATTGATGCCAATGACGATGTACAGCTGTCATATCGACGTTATTTTTAG
Upstream 100 bases:
>100_bases TCGTAAATTTGGTATAAATAAATAGCAAATATATCGTCATTTCAGTATAAACAAGAGAGATGTCAATAATATTTTGCTAA AAGTCTATTGTTACTCATAA
Downstream 100 bases:
>100_bases CAGCCACCAGTATTTTTAGCAGCATCTTCAAAGGCAGGCAGGAATTATGATGAATACGCATAATATATTAATTATCGGTC AAGGTGACATTGGATTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MFKFLMNVHHVISVSPLQCEILLMSIHSVSNRIAIDGTPIQLSCRARLPLAIAGLLLTVQAQAFLPTPASLVTTGELALN TDTNTNTNKAKAETDANQLLNLWREQSTTKNLAQDTTWRRLLYFSDEKKGLFGKNKNISAVDDARFFLSSNGREDSGAEL DAMLVAFADEMANKTNNSETNNTAQASNSNSALCRFPARAKWLSDTLAIDKSAMQVTCPELTAWMQKLAPEQLSIMFAQE YLDNPLSAFAHTLLRIDSKASVADLSQIHHAYALNDTVDGDTKDNFVLYAIKSMTGGYNNLIEIDPYPEKLAKYLQDDER DAWTYQLDLTPEEVQQIILHVWETKELKLPYYFTSDNCASEILRLIDVVRPEQHLLSQLPYAVIPSDVVQLLNKEGFLAS TNYTPADSTLRQAQLNKVKQESKQLGYHNNPKQMLNEIKSAQLNKVSSMSADGQTLLPHQIAVSDTNPLNRHSLQMGSIG IGQRGDNNYIDLGARAGYHDTLDHPSGFPQFFDLEGASATVRLYDTDIDKANQPKSVVLQNLTLIKGRSFNPVNSAKKGK TWGASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTPSAGTGEMPPQLCYTFLAGTAQTGRGINKGFRVGAGVNAGC RYQINNQLRAQAELQLPYWYHGSSDDSNVRGHYWQPISSLGLQYDIDKKQALRINANYEWQDRIDANDDVQLSYRRYF
Sequences:
>Translated_718_residues MFKFLMNVHHVISVSPLQCEILLMSIHSVSNRIAIDGTPIQLSCRARLPLAIAGLLLTVQAQAFLPTPASLVTTGELALN TDTNTNTNKAKAETDANQLLNLWREQSTTKNLAQDTTWRRLLYFSDEKKGLFGKNKNISAVDDARFFLSSNGREDSGAEL DAMLVAFADEMANKTNNSETNNTAQASNSNSALCRFPARAKWLSDTLAIDKSAMQVTCPELTAWMQKLAPEQLSIMFAQE YLDNPLSAFAHTLLRIDSKASVADLSQIHHAYALNDTVDGDTKDNFVLYAIKSMTGGYNNLIEIDPYPEKLAKYLQDDER DAWTYQLDLTPEEVQQIILHVWETKELKLPYYFTSDNCASEILRLIDVVRPEQHLLSQLPYAVIPSDVVQLLNKEGFLAS TNYTPADSTLRQAQLNKVKQESKQLGYHNNPKQMLNEIKSAQLNKVSSMSADGQTLLPHQIAVSDTNPLNRHSLQMGSIG IGQRGDNNYIDLGARAGYHDTLDHPSGFPQFFDLEGASATVRLYDTDIDKANQPKSVVLQNLTLIKGRSFNPVNSAKKGK TWGASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTPSAGTGEMPPQLCYTFLAGTAQTGRGINKGFRVGAGVNAGC RYQINNQLRAQAELQLPYWYHGSSDDSNVRGHYWQPISSLGLQYDIDKKQALRINANYEWQDRIDANDDVQLSYRRYF >Mature_718_residues MFKFLMNVHHVISVSPLQCEILLMSIHSVSNRIAIDGTPIQLSCRARLPLAIAGLLLTVQAQAFLPTPASLVTTGELALN TDTNTNTNKAKAETDANQLLNLWREQSTTKNLAQDTTWRRLLYFSDEKKGLFGKNKNISAVDDARFFLSSNGREDSGAEL DAMLVAFADEMANKTNNSETNNTAQASNSNSALCRFPARAKWLSDTLAIDKSAMQVTCPELTAWMQKLAPEQLSIMFAQE YLDNPLSAFAHTLLRIDSKASVADLSQIHHAYALNDTVDGDTKDNFVLYAIKSMTGGYNNLIEIDPYPEKLAKYLQDDER DAWTYQLDLTPEEVQQIILHVWETKELKLPYYFTSDNCASEILRLIDVVRPEQHLLSQLPYAVIPSDVVQLLNKEGFLAS TNYTPADSTLRQAQLNKVKQESKQLGYHNNPKQMLNEIKSAQLNKVSSMSADGQTLLPHQIAVSDTNPLNRHSLQMGSIG IGQRGDNNYIDLGARAGYHDTLDHPSGFPQFFDLEGASATVRLYDTDIDKANQPKSVVLQNLTLIKGRSFNPVNSAKKGK TWGASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTPSAGTGEMPPQLCYTFLAGTAQTGRGINKGFRVGAGVNAGC RYQINNQLRAQAELQLPYWYHGSSDDSNVRGHYWQPISSLGLQYDIDKKQALRINANYEWQDRIDANDDVQLSYRRYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79856; Mature: 79856
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFLMNVHHVISVSPLQCEILLMSIHSVSNRIAIDGTPIQLSCRARLPLAIAGLLLTVQ CHHHHHHHHHHEECCCCEEEEEEEEHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHH AQAFLPTPASLVTTGELALNTDTNTNTNKAKAETDANQLLNLWREQSTTKNLAQDTTWRR HHHCCCCCHHHEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LLYFSDEKKGLFGKNKNISAVDDARFFLSSNGREDSGAELDAMLVAFADEMANKTNNSET EEEEECCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC NNTAQASNSNSALCRFPARAKWLSDTLAIDKSAMQVTCPELTAWMQKLAPEQLSIMFAQE CCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHCHHHHHHHHHHH YLDNPLSAFAHTLLRIDSKASVADLSQIHHAYALNDTVDGDTKDNFVLYAIKSMTGGYNN HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCCCCCCC LIEIDPYPEKLAKYLQDDERDAWTYQLDLTPEEVQQIILHVWETKELKLPYYFTSDNCAS EEEECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCEEECCCHHHH EILRLIDVVRPEQHLLSQLPYAVIPSDVVQLLNKEGFLASTNYTPADSTLRQAQLNKVKQ HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH ESKQLGYHNNPKQMLNEIKSAQLNKVSSMSADGQTLLPHQIAVSDTNPLNRHSLQMGSIG HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCHHCEEECCCC IGQRGDNNYIDLGARAGYHDTLDHPSGFPQFFDLEGASATVRLYDTDIDKANQPKSVVLQ CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCHHHHHH NLTLIKGRSFNPVNSAKKGKTWGASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTP HHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCEECCCC SAGTGEMPPQLCYTFLAGTAQTGRGINKGFRVGAGVNAGCRYQINNQLRAQAELQLPYWY CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEEEEECCEEE HGSSDDSNVRGHYWQPISSLGLQYDIDKKQALRINANYEWQDRIDANDDVQLSYRRYF CCCCCCCCCCCCCCCCHHHCCCEEECCCCEEEEEECCCCHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MFKFLMNVHHVISVSPLQCEILLMSIHSVSNRIAIDGTPIQLSCRARLPLAIAGLLLTVQ CHHHHHHHHHHEECCCCEEEEEEEEHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHH AQAFLPTPASLVTTGELALNTDTNTNTNKAKAETDANQLLNLWREQSTTKNLAQDTTWRR HHHCCCCCHHHEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LLYFSDEKKGLFGKNKNISAVDDARFFLSSNGREDSGAELDAMLVAFADEMANKTNNSET EEEEECCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC NNTAQASNSNSALCRFPARAKWLSDTLAIDKSAMQVTCPELTAWMQKLAPEQLSIMFAQE CCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHCHHHHHHHHHHH YLDNPLSAFAHTLLRIDSKASVADLSQIHHAYALNDTVDGDTKDNFVLYAIKSMTGGYNN HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCCCCCCC LIEIDPYPEKLAKYLQDDERDAWTYQLDLTPEEVQQIILHVWETKELKLPYYFTSDNCAS EEEECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCEEECCCHHHH EILRLIDVVRPEQHLLSQLPYAVIPSDVVQLLNKEGFLASTNYTPADSTLRQAQLNKVKQ HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH ESKQLGYHNNPKQMLNEIKSAQLNKVSSMSADGQTLLPHQIAVSDTNPLNRHSLQMGSIG HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCHHCEEECCCC IGQRGDNNYIDLGARAGYHDTLDHPSGFPQFFDLEGASATVRLYDTDIDKANQPKSVVLQ CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCHHHHHH NLTLIKGRSFNPVNSAKKGKTWGASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTP HHHEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCEECCCC SAGTGEMPPQLCYTFLAGTAQTGRGINKGFRVGAGVNAGCRYQINNQLRAQAELQLPYWY CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEEEEECCEEE HGSSDDSNVRGHYWQPISSLGLQYDIDKKQALRINANYEWQDRIDANDDVQLSYRRYF CCCCCCCCCCCCCCCCHHHCCCEEECCCCEEEEEECCCCHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA