| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is katA [H]
Identifier: 93006823
GI number: 93006823
Start: 2459203
End: 2460747
Strand: Reverse
Name: katA [H]
Synonym: Pcryo_1999
Alternate gene names: 93006823
Gene position: 2460747-2459203 (Counterclockwise)
Preceding gene: 93006824
Following gene: 93006822
Centisome position: 80.42
GC content: 46.54
Gene sequence:
>1545_bases ATGAGCGACAACAACAGTAATAATAGCAGCGATAAAAAATGTCCTTACGCCCCGACCCAATTGACGATGAGCAACGGCGC ACCAGTTGCAGACAATCAAAACAGTCTCACTGCAGGCAAGCGTGGTCCATTATTAGCACAAGATATCTGGCTAAACGAGA AGCTAGGCAACTTTGCCCGTGAAGTGATTCCAGAGCGCCGCATGCACGCTAAAGGCTCAGGCGCATTTGGTACTTTTACC GTGACCAATGACATCACTAAATATACCCGTGCGGATATTTTTAGCGAAGTGGGTAAGCAAACGGAAATGTTTGCGCGCTT TAGTACCGTCGCAGGTGAGCGCGGCGCGGCTGATGCCGAACGCGATATTCGTGGCTTTGCTTTGAAATTCTACACCGAAG AAGGTAATTGGGACATGGTGGGTAATAATACGCCTGTGTTCTTCTTACGTGATCCGCGCAAATTCCCAGATTTAAACAAA GCCGTCAAACGTGATCCACGTACCAATATGCGTTCGGCGACCAACAATTGGGACTTTTGGACTTTATTACCTGAAGCATT ACATCAAGTCACCATCGTTATGAGTGATCGCGGTCTGCCAGCCTCGTACAGAAATATGCATGGTTTTGGCTCGCACACGT ATAGTTTTTGGAATGAAGCCAAAGAACGTTTCTGGGTCAAATTCCATTTCCGCACGCAACAAGGCATCAAGAACTTGACC GATGCAGAAGCGGCAGAGGTGGTTGGTTCGGATCGTGAAAGTCATCAAAAAGACTTGTACGATGCCATCGAAAATCGTCA TTTCCCAAAATGGAAAATGTATGTGCAAATCATGCCAGAAGCTGAGGCGGATACCGTTCCTTATCATCCGTTTGACTTGA CCAAAGTATGGCCAAAAGGGGATTACCCACTGATCGAAGTGGGTGAGTTTGAATTAAACAAAAACTCTGACAACTACTTT GTCGATGTGGAACAAGCAGCATTTGCCCCAAGTAATTTAGTACCGGGTATCAGCGTTTCACCGGATAAAATGCTACAAAA TCGCTTGGTTAACTATGCCGATGCTCAGCGTTATCGTGTTGGTGTCAATCATCAGCAAATTCCGGTGAATAAGCCGCGTT GCCCTGTGATGAGCAATCATCGTGATGGTCAAGGACGTGTCGATGATAACTATGGCAGTCGCCCGCATTATGAACCAAAC AGCTTTAGCCAGTGGCAAGAGCAGCCTGATTATGCTGAGCCACCATTAAAAATTGACGGCTATGCGGCGCATTATGATTT CCGTGAAGACGATAGCGATTATTTCAGTCAACCGAGAGCGTTGTTTAATTTGATGAGTGCTGAGCAACAACAAGTGCTAT TTGAAAACACAGCGAACAATATGGCGGGTGTGCCGGACTTTATTCAGTATCGCCACATTCGCAACTGTAACTGGTGTGAT GCTGCTTATGGCGAAGGCGTTGCCAAAGCATTAGGTTTAACGGTTGAAGATGCAATGGCAGCCCGTGATTCGGATCCTGC TCGTCATTTGCCTAGCTGCTTATAG
Upstream 100 bases:
>100_bases TTTTTCAGAAACATTTACAACTATTCTGGATATGTTATTAGAGGCTTATTCAGAATAGGTTTTGTACTTTCATCCATTTG CTATCCAAAGGAATATGATT
Downstream 100 bases:
>100_bases CTGATAGGTTTATCTAAAAACGTATTACTAAATATACTTGCTAAATCTATTATCATTACAATGACACCGCCTCAGGAAAC TAGAGCGGTGTTTTTTATTG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSDNNSNNSSDKKCPYAPTQLTMSNGAPVADNQNSLTAGKRGPLLAQDIWLNEKLGNFAREVIPERRMHAKGSGAFGTFT VTNDITKYTRADIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNK AVKRDPRTNMRSATNNWDFWTLLPEALHQVTIVMSDRGLPASYRNMHGFGSHTYSFWNEAKERFWVKFHFRTQQGIKNLT DAEAAEVVGSDRESHQKDLYDAIENRHFPKWKMYVQIMPEAEADTVPYHPFDLTKVWPKGDYPLIEVGEFELNKNSDNYF VDVEQAAFAPSNLVPGISVSPDKMLQNRLVNYADAQRYRVGVNHQQIPVNKPRCPVMSNHRDGQGRVDDNYGSRPHYEPN SFSQWQEQPDYAEPPLKIDGYAAHYDFREDDSDYFSQPRALFNLMSAEQQQVLFENTANNMAGVPDFIQYRHIRNCNWCD AAYGEGVAKALGLTVEDAMAARDSDPARHLPSCL
Sequences:
>Translated_514_residues MSDNNSNNSSDKKCPYAPTQLTMSNGAPVADNQNSLTAGKRGPLLAQDIWLNEKLGNFAREVIPERRMHAKGSGAFGTFT VTNDITKYTRADIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNK AVKRDPRTNMRSATNNWDFWTLLPEALHQVTIVMSDRGLPASYRNMHGFGSHTYSFWNEAKERFWVKFHFRTQQGIKNLT DAEAAEVVGSDRESHQKDLYDAIENRHFPKWKMYVQIMPEAEADTVPYHPFDLTKVWPKGDYPLIEVGEFELNKNSDNYF VDVEQAAFAPSNLVPGISVSPDKMLQNRLVNYADAQRYRVGVNHQQIPVNKPRCPVMSNHRDGQGRVDDNYGSRPHYEPN SFSQWQEQPDYAEPPLKIDGYAAHYDFREDDSDYFSQPRALFNLMSAEQQQVLFENTANNMAGVPDFIQYRHIRNCNWCD AAYGEGVAKALGLTVEDAMAARDSDPARHLPSCL >Mature_513_residues SDNNSNNSSDKKCPYAPTQLTMSNGAPVADNQNSLTAGKRGPLLAQDIWLNEKLGNFAREVIPERRMHAKGSGAFGTFTV TNDITKYTRADIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKA VKRDPRTNMRSATNNWDFWTLLPEALHQVTIVMSDRGLPASYRNMHGFGSHTYSFWNEAKERFWVKFHFRTQQGIKNLTD AEAAEVVGSDRESHQKDLYDAIENRHFPKWKMYVQIMPEAEADTVPYHPFDLTKVWPKGDYPLIEVGEFELNKNSDNYFV DVEQAAFAPSNLVPGISVSPDKMLQNRLVNYADAQRYRVGVNHQQIPVNKPRCPVMSNHRDGQGRVDDNYGSRPHYEPNS FSQWQEQPDYAEPPLKIDGYAAHYDFREDDSDYFSQPRALFNLMSAEQQQVLFENTANNMAGVPDFIQYRHIRNCNWCDA AYGEGVAKALGLTVEDAMAARDSDPARHLPSCL
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=473, Percent_Identity=47.9915433403806, Blast_Score=462, Evalue=1e-130, Organism=Escherichia coli, GI48994891, Length=495, Percent_Identity=39.5959595959596, Blast_Score=340, Evalue=1e-94, Organism=Caenorhabditis elegans, GI25151141, Length=476, Percent_Identity=46.4285714285714, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI25147792, Length=476, Percent_Identity=46.0084033613445, Blast_Score=443, Evalue=1e-124, Organism=Caenorhabditis elegans, GI71998444, Length=453, Percent_Identity=47.9028697571744, Blast_Score=440, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6320462, Length=483, Percent_Identity=45.5486542443064, Blast_Score=388, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6321525, Length=362, Percent_Identity=42.5414364640884, Blast_Score=294, Evalue=3e-80, Organism=Drosophila melanogaster, GI17981717, Length=481, Percent_Identity=44.9064449064449, Blast_Score=422, Evalue=1e-118, Organism=Drosophila melanogaster, GI19920968, Length=478, Percent_Identity=43.0962343096234, Blast_Score=394, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 58536; Mature: 58404
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNNSNNSSDKKCPYAPTQLTMSNGAPVADNQNSLTAGKRGPLLAQDIWLNEKLGNFAR CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EVIPERRMHAKGSGAFGTFTVTNDITKYTRADIFSEVGKQTEMFARFSTVAGERGAADAE HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFW HCCCEEEEEEEEECCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCHHHCCCCCCHH TLLPEALHQVTIVMSDRGLPASYRNMHGFGSHTYSFWNEAKERFWVKFHFRTQQGIKNLT HHHHHHHCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEECHHHHHHHH DAEAAEVVGSDRESHQKDLYDAIENRHFPKWKMYVQIMPEAEADTVPYHPFDLTKVWPKG HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCC DYPLIEVGEFELNKNSDNYFVDVEQAAFAPSNLVPGISVSPDKMLQNRLVNYADAQRYRV CCCEEEECEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHCCHHEEE GVNHQQIPVNKPRCPVMSNHRDGQGRVDDNYGSRPHYEPNSFSQWQEQPDYAEPPLKIDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECC YAAHYDFREDDSDYFSQPRALFNLMSAEQQQVLFENTANNMAGVPDFIQYRHIRNCNWCD EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCC AAYGEGVAKALGLTVEDAMAARDSDPARHLPSCL HHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure SDNNSNNSSDKKCPYAPTQLTMSNGAPVADNQNSLTAGKRGPLLAQDIWLNEKLGNFAR CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EVIPERRMHAKGSGAFGTFTVTNDITKYTRADIFSEVGKQTEMFARFSTVAGERGAADAE HHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFW HCCCEEEEEEEEECCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCHHHCCCCCCHH TLLPEALHQVTIVMSDRGLPASYRNMHGFGSHTYSFWNEAKERFWVKFHFRTQQGIKNLT HHHHHHHCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEECHHHHHHHH DAEAAEVVGSDRESHQKDLYDAIENRHFPKWKMYVQIMPEAEADTVPYHPFDLTKVWPKG HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCC DYPLIEVGEFELNKNSDNYFVDVEQAAFAPSNLVPGISVSPDKMLQNRLVNYADAQRYRV CCCEEEECEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHCCHHEEE GVNHQQIPVNKPRCPVMSNHRDGQGRVDDNYGSRPHYEPNSFSQWQEQPDYAEPPLKIDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECC YAAHYDFREDDSDYFSQPRALFNLMSAEQQQVLFENTANNMAGVPDFIQYRHIRNCNWCD EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCC AAYGEGVAKALGLTVEDAMAARDSDPARHLPSCL HHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8188593; 7542800 [H]