| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006812
Identifier: 93006812
GI number: 93006812
Start: 2448223
End: 2450226
Strand: Reverse
Name: 93006812
Synonym: Pcryo_1988
Alternate gene names: NA
Gene position: 2450226-2448223 (Counterclockwise)
Preceding gene: 93006815
Following gene: 93006811
Centisome position: 80.08
GC content: 36.08
Gene sequence:
>2004_bases ATGTCATATTCTTCATTACCTACCTCTAAATTATTTCAGCTCACCTTTTTAACCTGCGCATTGGCACTGGCTGGTTGTGG TGGTGGAGATGGCGTAGATTCACTACCGCCAGTATTAGAAAATGGAAATGGCAATCAAAACCCAGATGACTCTTCAGCTA GTGCGACTGAAGTATATATATCATCTGATAAAACTCAGCTGTTAACAGGCAAAGATGAGACTGTTGTAAATATTAGGGTA ACCGATAAGAATGGTGGTATCGTCGCTGGAGTACCTGTTGTCATAGGTATTGCTGACGCTAGATTGTATGGATTATCTTT AGACAAACCATCCGAACAGGTTACTGATGATAATGGACTAGTTACTGTTAAATTAATTCAAGGTAAAGCAGATATTGACT CTCAGTTGGATCATGAAACTCTATTGACTGTGTTTATTAAGAATAATAGTACTGTCAAACAAACAATGCCAATTATAGTT TCTGGTACTAACGCTATTAATGTTTTATCAACTAAGAACATAGTGACTACCTCAGAAAACTTTAGCGTGTCGGGAAGGGT TTTAGATGGGACTGCAACGCCTGTTACTAATACAGACGTTATTTTATACAGTAATGACAAACAAGCCGGAACTGGAAAAC TGGATAATAATGGTAATTTTACTTTTGACTTAAAAGCTTCTGATTTAGTGGCAGTGAACAATAACTATCTGTTCAGTATA GAAGTTAAAGGAATTAAGATTAGTCAACGTATCCCTGATATTCTAACAGTAGTATCTACGACCAGCTCAAGTCTGAGCTT TTCGGAAACACCTGATATTATTGTTGGAAATAGGAAGAAAATGACATTAAACGTTCCAAGTGCTGTGGATGGGGATACTG TAACTATATCAACTAACAAAGGTGAACTTTTTACTACTAATGTTAGTAATCAAGGCAACTCTCGCATTACATCTACGGTA AATAATAAAAAAGTAGACTTTTATATTGATTCAAAAGTACCTGGTAATGCGACTATTAGTGCTCAATATGGTAATGAAAC TAAAGAAACTATATTAAACTTTGTGTCAACTGAAGCGACTAAGCTGATTCTACAAACTGATCGTGCGGTTATTAATGTTG GCGACTCTACGCAAGTCACTGCCAAAGTTTTTGATAAAGATGATACACCAGTAAAAAATGCCATTGTGCAATTTACTGTG ATCAATGATTCATCGGCTGGTAGTATAAGTAAAGGGGTTGCGTATACTAATAGTAATGGTATTGCTATGGTAACTTATAA TGCAGGACAGAGCCCGACTAGTATAAATGGAGTAATAATTAAGGCAGAAGTACAAGCTGTCAAATTACCAGACGGTAAGG AAAAACCAGTAAGTGTGCCAATAGCTAATTCATCAATTACTGTTCAAACTAAATCCACCTTTATTAGCTTTGCTTTTGCG GATAAAGTTTCTACTGATTCTAGTGAGATATATTATTTCCGAAAAGGATCAATCAGTGTCCTAAACAGCACAGGTAAGCC TGCTATTAACCAGCAAGTTACTATTAATTTAAATCCTGACACCTACCTTAAAGGCTTTTTTGAAATCATTAATGATATTT CTGGAAATAAGTCTTGGGGCAGAAATGATGTTACCTGTGAAAATGAAGATTTAAATAATAATGGTATTCTAGATGAAGGC GAGGATACTAACGGGAATGGACGTTTAGACCCTATAAACGTAGCAGCAGTACTTTTAGAAGGCGGTCAGGAGGTTGAACC TAATCAGAACTTTACAACAGATAATACTGGTAGAGTTGATTTTTCAATACGTTATCCTAAACAATATGCAAACTGGTACA GAGCTAAGGTTACCGTGAATACTCGAGTAGATGGGAGCGAATCACAACAATCAAGAGTGATTGATTTTCCAGCTTCAGTA GATGATATTGATATTAGTATACCGTTACGTCCAAATACTAATAGCCCTTTTGGCACTGAATTAAACTGTTCTAGTTCTAG ATAG
Upstream 100 bases:
>100_bases ATTATTGTAAATGTATGTATCATTACCAATCTATTAGGATGCCGTGTAATGATTTTGCCTGTTTACTTATATAAATGATT GCCGCTGCGGAGTTCCAAAT
Downstream 100 bases:
>100_bases TATTAATTATAAATACAAAAACCCCCAACCCTCGCGTTGGGGGTTTTTGTATTTATAATCCCAATAACCAAATACAACCA ACTCAATCAGCAAATTCTTG
Product: Ig-like protein
Products: NA
Alternate protein names: Invasin Domain Protein; Ig Domain Domain Protein
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MSYSSLPTSKLFQLTFLTCALALAGCGGGDGVDSLPPVLENGNGNQNPDDSSASATEVYISSDKTQLLTGKDETVVNIRV TDKNGGIVAGVPVVIGIADARLYGLSLDKPSEQVTDDNGLVTVKLIQGKADIDSQLDHETLLTVFIKNNSTVKQTMPIIV SGTNAINVLSTKNIVTTSENFSVSGRVLDGTATPVTNTDVILYSNDKQAGTGKLDNNGNFTFDLKASDLVAVNNNYLFSI EVKGIKISQRIPDILTVVSTTSSSLSFSETPDIIVGNRKKMTLNVPSAVDGDTVTISTNKGELFTTNVSNQGNSRITSTV NNKKVDFYIDSKVPGNATISAQYGNETKETILNFVSTEATKLILQTDRAVINVGDSTQVTAKVFDKDDTPVKNAIVQFTV INDSSAGSISKGVAYTNSNGIAMVTYNAGQSPTSINGVIIKAEVQAVKLPDGKEKPVSVPIANSSITVQTKSTFISFAFA DKVSTDSSEIYYFRKGSISVLNSTGKPAINQQVTINLNPDTYLKGFFEIINDISGNKSWGRNDVTCENEDLNNNGILDEG EDTNGNGRLDPINVAAVLLEGGQEVEPNQNFTTDNTGRVDFSIRYPKQYANWYRAKVTVNTRVDGSESQQSRVIDFPASV DDIDISIPLRPNTNSPFGTELNCSSSR
Sequences:
>Translated_667_residues MSYSSLPTSKLFQLTFLTCALALAGCGGGDGVDSLPPVLENGNGNQNPDDSSASATEVYISSDKTQLLTGKDETVVNIRV TDKNGGIVAGVPVVIGIADARLYGLSLDKPSEQVTDDNGLVTVKLIQGKADIDSQLDHETLLTVFIKNNSTVKQTMPIIV SGTNAINVLSTKNIVTTSENFSVSGRVLDGTATPVTNTDVILYSNDKQAGTGKLDNNGNFTFDLKASDLVAVNNNYLFSI EVKGIKISQRIPDILTVVSTTSSSLSFSETPDIIVGNRKKMTLNVPSAVDGDTVTISTNKGELFTTNVSNQGNSRITSTV NNKKVDFYIDSKVPGNATISAQYGNETKETILNFVSTEATKLILQTDRAVINVGDSTQVTAKVFDKDDTPVKNAIVQFTV INDSSAGSISKGVAYTNSNGIAMVTYNAGQSPTSINGVIIKAEVQAVKLPDGKEKPVSVPIANSSITVQTKSTFISFAFA DKVSTDSSEIYYFRKGSISVLNSTGKPAINQQVTINLNPDTYLKGFFEIINDISGNKSWGRNDVTCENEDLNNNGILDEG EDTNGNGRLDPINVAAVLLEGGQEVEPNQNFTTDNTGRVDFSIRYPKQYANWYRAKVTVNTRVDGSESQQSRVIDFPASV DDIDISIPLRPNTNSPFGTELNCSSSR >Mature_666_residues SYSSLPTSKLFQLTFLTCALALAGCGGGDGVDSLPPVLENGNGNQNPDDSSASATEVYISSDKTQLLTGKDETVVNIRVT DKNGGIVAGVPVVIGIADARLYGLSLDKPSEQVTDDNGLVTVKLIQGKADIDSQLDHETLLTVFIKNNSTVKQTMPIIVS GTNAINVLSTKNIVTTSENFSVSGRVLDGTATPVTNTDVILYSNDKQAGTGKLDNNGNFTFDLKASDLVAVNNNYLFSIE VKGIKISQRIPDILTVVSTTSSSLSFSETPDIIVGNRKKMTLNVPSAVDGDTVTISTNKGELFTTNVSNQGNSRITSTVN NKKVDFYIDSKVPGNATISAQYGNETKETILNFVSTEATKLILQTDRAVINVGDSTQVTAKVFDKDDTPVKNAIVQFTVI NDSSAGSISKGVAYTNSNGIAMVTYNAGQSPTSINGVIIKAEVQAVKLPDGKEKPVSVPIANSSITVQTKSTFISFAFAD KVSTDSSEIYYFRKGSISVLNSTGKPAINQQVTINLNPDTYLKGFFEIINDISGNKSWGRNDVTCENEDLNNNGILDEGE DTNGNGRLDPINVAAVLLEGGQEVEPNQNFTTDNTGRVDFSIRYPKQYANWYRAKVTVNTRVDGSESQQSRVIDFPASVD DIDISIPLRPNTNSPFGTELNCSSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71323; Mature: 71192
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSSLPTSKLFQLTFLTCALALAGCGGGDGVDSLPPVLENGNGNQNPDDSSASATEVYI CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEE SSDKTQLLTGKDETVVNIRVTDKNGGIVAGVPVVIGIADARLYGLSLDKPSEQVTDDNGL ECCCEEEEECCCCEEEEEEEECCCCCEEECCEEEEEEECCEEEEEECCCCHHHCCCCCCE VTVKLIQGKADIDSQLDHETLLTVFIKNNSTVKQTMPIIVSGTNAINVLSTKNIVTTSEN EEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEECCEEEECCCEEEEEEECCEEEECCC FSVSGRVLDGTATPVTNTDVILYSNDKQAGTGKLDNNGNFTFDLKASDLVAVNNNYLFSI CEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCEEEECCCEEEEE EVKGIKISQRIPDILTVVSTTSSSLSFSETPDIIVGNRKKMTLNVPSAVDGDTVTISTNK EEECEEEHHHCCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCC GELFTTNVSNQGNSRITSTVNNKKVDFYIDSKVPGNATISAQYGNETKETILNFVSTEAT CEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCE KLILQTDRAVINVGDSTQVTAKVFDKDDTPVKNAIVQFTVINDSSAGSISKGVAYTNSNG EEEEEECCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCC IAMVTYNAGQSPTSINGVIIKAEVQAVKLPDGKEKPVSVPIANSSITVQTKSTFISFAFA EEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCEEEEEECCEEEEEEEE DKVSTDSSEIYYFRKGSISVLNSTGKPAINQQVTINLNPDTYLKGFFEIINDISGNKSWG CCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC RNDVTCENEDLNNNGILDEGEDTNGNGRLDPINVAAVLLEGGQEVEPNQNFTTDNTGRVD CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE FSIRYPKQYANWYRAKVTVNTRVDGSESQQSRVIDFPASVDDIDISIPLRPNTNSPFGTE EEEECCHHHCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCE LNCSSSR ECCCCCC >Mature Secondary Structure SYSSLPTSKLFQLTFLTCALALAGCGGGDGVDSLPPVLENGNGNQNPDDSSASATEVYI CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEE SSDKTQLLTGKDETVVNIRVTDKNGGIVAGVPVVIGIADARLYGLSLDKPSEQVTDDNGL ECCCEEEEECCCCEEEEEEEECCCCCEEECCEEEEEEECCEEEEEECCCCHHHCCCCCCE VTVKLIQGKADIDSQLDHETLLTVFIKNNSTVKQTMPIIVSGTNAINVLSTKNIVTTSEN EEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEECCEEEECCCEEEEEEECCEEEECCC FSVSGRVLDGTATPVTNTDVILYSNDKQAGTGKLDNNGNFTFDLKASDLVAVNNNYLFSI CEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCEEEECCCEEEEE EVKGIKISQRIPDILTVVSTTSSSLSFSETPDIIVGNRKKMTLNVPSAVDGDTVTISTNK EEECEEEHHHCCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCC GELFTTNVSNQGNSRITSTVNNKKVDFYIDSKVPGNATISAQYGNETKETILNFVSTEAT CEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCE KLILQTDRAVINVGDSTQVTAKVFDKDDTPVKNAIVQFTVINDSSAGSISKGVAYTNSNG EEEEEECCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCC IAMVTYNAGQSPTSINGVIIKAEVQAVKLPDGKEKPVSVPIANSSITVQTKSTFISFAFA EEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCEEEEEECCEEEEEEEE DKVSTDSSEIYYFRKGSISVLNSTGKPAINQQVTINLNPDTYLKGFFEIINDISGNKSWG CCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC RNDVTCENEDLNNNGILDEGEDTNGNGRLDPINVAAVLLEGGQEVEPNQNFTTDNTGRVD CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE FSIRYPKQYANWYRAKVTVNTRVDGSESQQSRVIDFPASVDDIDISIPLRPNTNSPFGTE EEEECCHHHCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCE LNCSSSR ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA