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The map label for this gene is yajR [H]

Identifier: 93006783

GI number: 93006783

Start: 2417454

End: 2418818

Strand: Reverse

Name: yajR [H]

Synonym: Pcryo_1959

Alternate gene names: 93006783

Gene position: 2418818-2417454 (Counterclockwise)

Preceding gene: 93006787

Following gene: 93006782

Centisome position: 79.05

GC content: 45.57

Gene sequence:

>1365_bases
ATGAATAGCGTAGAAAAACGGGCAATCCTCGGGGTCGGTGGCATCTTTGCCTTGCGGATGATTGGTTTGTTTATGATTGT
GCCAGTATTTTCTGTGTATGGTGATAATTATGCGCATGCGACGCCGTTTCTGATTGGTTTGGCAGTCGGTATTTATGGGC
TAGGACAGGCAATATTTCAGATTCCAATGAGCCTTGCCGCGGATAAGTTCCCGCGTAAGCCGATTATATTTTTAGGTCTT
GTCTTGTTTGCCATCGGCGGTATTATTGCTGCCAATGCCACAGATATTTACGAGGTCATTATTGGTCGAGCACTGGCAGG
TAGTGGCGCGGTCTCTGCGGTATTGATGGCGTTACTTGCCGATGTAACTCGTGAGGAGATGCGCACCAAAGCGATGGCGA
CGATGGGTTTGACGATTGCGACCTCTATCATGCTTGCTTTTGCCTTTGGGCCTCTATTAGTAGGCTCGCTTGGCATCTCA
GGATTGTTTTGGTTGACTGCAGGCTTTGCAGTTTTGGCGATGTTATTGTTACTGTTCGTCCCGACACCGCTACGGGTACT
TAAGCACAATTTAGACAATAAATCGATTGGTCAGCAGTTGGCAACAGTTCTAAAAATTGGTGATCTAAATCGCTTGCACA
TTGGCATATTTGCTCTGCATCTGACCATGACCGCTATCTTTGTTATTTTACCGCATCAGCTTAATGACGTACTAGGATTG
TCGGTACGTCAGCAAGGCTTGGTCTATTTGCCTTTATTGTTCATCGGTTTTGCCGTCGCGATACCTTTTATTATCATCGC
CGAAAAGAAACGCAAAATGCGCCAAGTATTTTTGGCTGCGATTGCACTGATGACGGTTGCCTTAGCATTATTAGCGCTCG
GTGGTCAGGTTGGCGTCGGTATTATATTAGGCTTATTGCTCTACTTTATGGGCTTTAATCTACTTGAAGCAACGATTCCT
TCATGGATATCTAAGCGCGCACCAGTCGCCAATAAAGCCACTGCGATGGGGTTAAATTCATCCAGTCAGTTCTTTGGTGC
TTTCGTTGGTGGCGCAATGGGCGGGTTGTTATTAAGTCAGCCTAATTTGTTGGCATGGGGCATATTGGCAATTATAATGG
CAGCCTCTTTATTGCTGATTATTCCTATTGCTGATCCACCATATTTGTCAAGTACGACTGTGACGATACCAAAGAATATT
GATATTCAGGACTGGTCACGGCAAATGCTGGCAGTAGATGGTGTTGATGAGCTGGTGGTCATGGCAAAAGAACAGGTTGC
TTATTTAAAATTGGACAAGACGCAGCTCACAGATACTTCGCGACAGGAGCTGTCGCATTTGGCGCAAAGCCCTCTAGATA
TTTAA

Upstream 100 bases:

>100_bases
ACTAGTGAGCTTAATTTGTAGGCTAAACCCTTGATACAGTCGTAATAATACAAGCAGAGCTGCCGTGATAAACCAGCAAT
GATGAACCAGTGAGGCAAGT

Downstream 100 bases:

>100_bases
CAGAAAAATGGTTAAAGTAAAAGTATATTACTGCTAAGATTGAGGCTTTATATTAAAGACTCGATTAAAGCTGGTAATAA
AATTATTCATAAGTAAAAGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNSVEKRAILGVGGIFALRMIGLFMIVPVFSVYGDNYAHATPFLIGLAVGIYGLGQAIFQIPMSLAADKFPRKPIIFLGL
VLFAIGGIIAANATDIYEVIIGRALAGSGAVSAVLMALLADVTREEMRTKAMATMGLTIATSIMLAFAFGPLLVGSLGIS
GLFWLTAGFAVLAMLLLLFVPTPLRVLKHNLDNKSIGQQLATVLKIGDLNRLHIGIFALHLTMTAIFVILPHQLNDVLGL
SVRQQGLVYLPLLFIGFAVAIPFIIIAEKKRKMRQVFLAAIALMTVALALLALGGQVGVGIILGLLLYFMGFNLLEATIP
SWISKRAPVANKATAMGLNSSSQFFGAFVGGAMGGLLLSQPNLLAWGILAIIMAASLLLIIPIADPPYLSSTTVTIPKNI
DIQDWSRQMLAVDGVDELVVMAKEQVAYLKLDKTQLTDTSRQELSHLAQSPLDI

Sequences:

>Translated_454_residues
MNSVEKRAILGVGGIFALRMIGLFMIVPVFSVYGDNYAHATPFLIGLAVGIYGLGQAIFQIPMSLAADKFPRKPIIFLGL
VLFAIGGIIAANATDIYEVIIGRALAGSGAVSAVLMALLADVTREEMRTKAMATMGLTIATSIMLAFAFGPLLVGSLGIS
GLFWLTAGFAVLAMLLLLFVPTPLRVLKHNLDNKSIGQQLATVLKIGDLNRLHIGIFALHLTMTAIFVILPHQLNDVLGL
SVRQQGLVYLPLLFIGFAVAIPFIIIAEKKRKMRQVFLAAIALMTVALALLALGGQVGVGIILGLLLYFMGFNLLEATIP
SWISKRAPVANKATAMGLNSSSQFFGAFVGGAMGGLLLSQPNLLAWGILAIIMAASLLLIIPIADPPYLSSTTVTIPKNI
DIQDWSRQMLAVDGVDELVVMAKEQVAYLKLDKTQLTDTSRQELSHLAQSPLDI
>Mature_454_residues
MNSVEKRAILGVGGIFALRMIGLFMIVPVFSVYGDNYAHATPFLIGLAVGIYGLGQAIFQIPMSLAADKFPRKPIIFLGL
VLFAIGGIIAANATDIYEVIIGRALAGSGAVSAVLMALLADVTREEMRTKAMATMGLTIATSIMLAFAFGPLLVGSLGIS
GLFWLTAGFAVLAMLLLLFVPTPLRVLKHNLDNKSIGQQLATVLKIGDLNRLHIGIFALHLTMTAIFVILPHQLNDVLGL
SVRQQGLVYLPLLFIGFAVAIPFIIIAEKKRKMRQVFLAAIALMTVALALLALGGQVGVGIILGLLLYFMGFNLLEATIP
SWISKRAPVANKATAMGLNSSSQFFGAFVGGAMGGLLLSQPNLLAWGILAIIMAASLLLIIPIADPPYLSSTTVTIPKNI
DIQDWSRQMLAVDGVDELVVMAKEQVAYLKLDKTQLTDTSRQELSHLAQSPLDI

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=451, Percent_Identity=39.689578713969, Blast_Score=308, Evalue=7e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48476; Mature: 48476

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHEEECCHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHEEECCHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]