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The map label for this gene is hvrA [H]

Identifier: 93006781

GI number: 93006781

Start: 2415858

End: 2416223

Strand: Reverse

Name: hvrA [H]

Synonym: Pcryo_1957

Alternate gene names: 93006781

Gene position: 2416223-2415858 (Counterclockwise)

Preceding gene: 93006782

Following gene: 93006780

Centisome position: 78.96

GC content: 38.25

Gene sequence:

>366_bases
ATGCTATTTATTTATACCCTTTATTTTAATGTGGAAAATACTATGAACAAAAGTAATGTTATTGATTTAAACAGCTTAAA
TGTTGATGAGCTACGTGCTATTACTGAAAATGCGCAGCAGCTTATTGCTCAAAAGCAACACCAGCGCTTGTATGATGCTT
ATACGCAGTTTGAAAAAATCGCTGAAGAAAGCAATGCCAGTATCGAGGAGATTTTACAAGCGGGCGAAAAACTAGAAAAG
AAGCGTAGCATTAAATACCGTAATACCGACAATGACGAAGAAACATGGACTGGTCGCGGACGTAAACCAACATGGTTGGT
AGAGGCATTAGCCGCAGGTCGTCGTCTTGAAGATTTTGCTATTTAA

Upstream 100 bases:

>100_bases
ATTTATCAGTAGACAATCAAATTTTTATCAATATGCGAAAGATTTATTATTTAATAATTACTGTATTTAGTAGTTCTTGA
TAAATCTATTTTTAGTATAA

Downstream 100 bases:

>100_bases
TTTTCTAATGGATAGTCGCTGTTATATTTAGCAACGAACGCTCTGTCTATAAAGTTCCGTTTGATTAACGAGTAAATTGA
ACCTTTATAGGCAGATAAAA

Product: histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLFIYTLYFNVENTMNKSNVIDLNSLNVDELRAITENAQQLIAQKQHQRLYDAYTQFEKIAEESNASIEEILQAGEKLEK
KRSIKYRNTDNDEETWTGRGRKPTWLVEALAAGRRLEDFAI

Sequences:

>Translated_121_residues
MLFIYTLYFNVENTMNKSNVIDLNSLNVDELRAITENAQQLIAQKQHQRLYDAYTQFEKIAEESNASIEEILQAGEKLEK
KRSIKYRNTDNDEETWTGRGRKPTWLVEALAAGRRLEDFAI
>Mature_121_residues
MLFIYTLYFNVENTMNKSNVIDLNSLNVDELRAITENAQQLIAQKQHQRLYDAYTQFEKIAEESNASIEEILQAGEKLEK
KRSIKYRNTDNDEETWTGRGRKPTWLVEALAAGRRLEDFAI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 14130; Mature: 14130

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIYTLYFNVENTMNKSNVIDLNSLNVDELRAITENAQQLIAQKQHQRLYDAYTQFEKI
CEEEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEESNASIEEILQAGEKLEKKRSIKYRNTDNDEETWTGRGRKPTWLVEALAAGRRLEDFA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCC
I
C
>Mature Secondary Structure
MLFIYTLYFNVENTMNKSNVIDLNSLNVDELRAITENAQQLIAQKQHQRLYDAYTQFEKI
CEEEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEESNASIEEILQAGEKLEKKRSIKYRNTDNDEETWTGRGRKPTWLVEALAAGRRLEDFA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]