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The map label for this gene is fliY [C]

Identifier: 93006752

GI number: 93006752

Start: 2378626

End: 2379462

Strand: Reverse

Name: fliY [C]

Synonym: Pcryo_1928

Alternate gene names: 93006752

Gene position: 2379462-2378626 (Counterclockwise)

Preceding gene: 93006753

Following gene: 93006751

Centisome position: 77.76

GC content: 47.55

Gene sequence:

>837_bases
ATGAAACGTCGCACGCTTTTAGCCCTTGCCGCAAGTACCGTATTGCTTGCCGCTTGTGGTCAATCACCTACCAATGATGC
TGAAACCAAGGCAACTGATACCGCTGCAAGTGGCGGTTCTGATTTGCTACAGCGTATCAATAACGGCGGCACTATCAACG
TCGGTACCGAAGGCACTTATCCTCCATTCACTTATCATGATGAGAGCGGCAAACTGACCGGCTATGATGTCGAAGTGACG
CGTGCCGTTGCTGACAAACTTGGCGTTAAAGTTGAGTTTCAAGAAACTCAATGGGATGCAATGCTCGCAGGTTTGGACGC
CAAGCGTTTTGATATGGTTGCCAACCAAGTCAGCTTGACCACGCCTGAGCGTTTAGCAAAATATGATAAAGCGCAAGCGT
ATAGCTGGTCGGGCGCAGTGGTTTTAGCGCCAAAAGATGATAACCGTTATAGCTCGTGGGAGGCTTTAAAAGGTCTGCGT
AGCGCTCAGTCATTGACCAGCAACTATGGTGAGCTTGCAGAGCGTTATCAAGCTGAAGTCATCCCTGTTGATGGTATGGC
TCAAGCGATCCAGCTGGTCAAACAAGATCGTGCTGACTTTACCATGAATGACAATCTTGCCATTTTGGATTATCTAAAAA
AATTCCCAGATGCGGCGCTTGAGATTAAATTGACGGCCCCTGTCAGTGAGCAAACCGGTTCGGGATTGGTATTGATAAAA
GGTGATGATGCGGTATTGGCAAAATTAGACGAAGCCATGGCAGCATTGGCCGCTGATGGAACGCTCACCAAACTGAGCCA
AGAATTCTTTGGTGCTGATATAAGTCAACAAAAATAA

Upstream 100 bases:

>100_bases
ATGATATCTGCTTATTCTTCAGTACGGTTTTATTGGCAGGACATATTTTGCTTTATTTGACTCAGTCACTTTTATTTACT
CACTATGATAAGGACGTCTT

Downstream 100 bases:

>100_bases
TGCTAGCTTCTATAACGTCAGTGTTAGCAGATTTATTGGCATTATTGCCGTTTATGAGTCCTGATCGGGCGCAGATTGTT
ATCTCGTCTTTTTGGCCGAT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTYPPFTYHDESGKLTGYDVEVT
RAVADKLGVKVEFQETQWDAMLAGLDAKRFDMVANQVSLTTPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLR
SAQSLTSNYGELAERYQAEVIPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSEQTGSGLVLIK
GDDAVLAKLDEAMAALAADGTLTKLSQEFFGADISQQK

Sequences:

>Translated_278_residues
MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTYPPFTYHDESGKLTGYDVEVT
RAVADKLGVKVEFQETQWDAMLAGLDAKRFDMVANQVSLTTPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLR
SAQSLTSNYGELAERYQAEVIPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSEQTGSGLVLIK
GDDAVLAKLDEAMAALAADGTLTKLSQEFFGADISQQK
>Mature_278_residues
MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTYPPFTYHDESGKLTGYDVEVT
RAVADKLGVKVEFQETQWDAMLAGLDAKRFDMVANQVSLTTPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLR
SAQSLTSNYGELAERYQAEVIPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSEQTGSGLVLIK
GDDAVLAKLDEAMAALAADGTLTKLSQEFFGADISQQK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=238, Percent_Identity=37.8151260504202, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=28.3783783783784, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787088, Length=223, Percent_Identity=24.6636771300448, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788649, Length=237, Percent_Identity=28.2700421940928, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29897; Mature: 29897

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCC
PPFTYHDESGKLTGYDVEVTRAVADKLGVKVEFQETQWDAMLAGLDAKRFDMVANQVSLT
CCCEEECCCCCEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCC
TPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLRSAQSLTSNYGELAERYQAEV
CHHHHHHHHHHCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSEQTGSGLVLIK
ECCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE
GDDAVLAKLDEAMAALAADGTLTKLSQEFFGADISQQK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRRTLLALAASTVLLAACGQSPTNDAETKATDTAASGGSDLLQRINNGGTINVGTEGTY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCC
PPFTYHDESGKLTGYDVEVTRAVADKLGVKVEFQETQWDAMLAGLDAKRFDMVANQVSLT
CCCEEECCCCCEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCC
TPERLAKYDKAQAYSWSGAVVLAPKDDNRYSSWEALKGLRSAQSLTSNYGELAERYQAEV
CHHHHHHHHHHCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IPVDGMAQAIQLVKQDRADFTMNDNLAILDYLKKFPDAALEIKLTAPVSEQTGSGLVLIK
ECCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEE
GDDAVLAKLDEAMAALAADGTLTKLSQEFFGADISQQK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]