| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006730
Identifier: 93006730
GI number: 93006730
Start: 2353766
End: 2354770
Strand: Reverse
Name: 93006730
Synonym: Pcryo_1906
Alternate gene names: NA
Gene position: 2354770-2353766 (Counterclockwise)
Preceding gene: 93006735
Following gene: 93006729
Centisome position: 76.96
GC content: 48.26
Gene sequence:
>1005_bases ATGAGTTCAACGGATTTAGAGACGCCCCCACTTAAATCAATCTTGATAGCGATACTAGTTGTAGTAGGGCTTCACGTGCT TACGGCAGTGGCATTGGTGGCAATGAAACCGTCTGCACCCAAAGTCGCGCCGCCCAAACAGACGCCGCCTATTGAAATAG AGCTGGTATCATTACCTGCTGCGTTACCTAAAGAGCCGGTAAAAGTGGTGAAATCTGTTGAAAAAGAAGTGACTAAGGTT GTGATAGATAAAAGCACGCTAGCGCCAAAACCGCAGGCTATAATAAAACCAAAGCCGGTCACAGAGACGCCAAAAAAACC AGTGGTACAAGAACGCAAACCTGATATTACACCGCTAGTCAAAAAAGAAAAGACAACGTCGATTGCTCAAGAAAAGCCGT CACAAAAACAGACTAAGCAAGAAGAGCCAAATCCCGCCATTGATAAAGCCATATCTGAGCAGCTTGCTAATAACCAAAAG GTTAACAATCAGCAAGCTGAGCAACGTCGACTTGTAGCAGCACAAGCGGAAAAAGCAGCGCAAGAAGCACAGCTGCAACA GGCGCAGGCTCAGGCTCAGGCTCAGGAAGCGCAAAGAGTAGCAAATGCTAAAGCGAGTGCCGAAGCAGCAAATGACGCGG CTCAAAAAGCAGCAAGAGCGGCTAAGCAAGCAGAAAAGGCCGCTAAAGCAGCTGCTGAAAGTAATGAGCCTGTCAATTTT ACCGCCAGCTCAGCAAATTGGGTATCAGCCCCAAACTTCAGTTTCCCTGAGCGCGTTGCACGACGAGCAAATTCGGGTGA TACGCTCAACGTAGTATTGATACTGAGGGTAAATAAGCAGGGCGGGATCGATAATGTGCGTATCGCTCAATCTTCGGGGA ATGCGGCATTGGATAAAGAAGCGACGCGGCAAGTGCGCTCAGGCAAGTTTAAACCCTTTACGAATAATGCTGGCGTACCA GTGGTTGGCAATGTGACCTTGCCTGTGAGCTACGCAGTACCTTAA
Upstream 100 bases:
>100_bases TTCACAATACCGACTGAAATATTAGAAATTTACTATTGATAATAATTATCGTTTGCATTATTATCACCACCATTCTATGA CGGTTAAATGCTAGAGTATT
Downstream 100 bases:
>100_bases TGATTATCCATCTATAAAAACATACATTCTAATCTTTTCACGATAAGCATAAATGCGATAGTCGCTGCAGGTTTATGTGA TGGCACAACTTACTAGGGAG
Product: TonB-like protein
Products: NA
Alternate protein names: NB/TolA Energy Transducing Protein; NB Family Protein
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSSTDLETPPLKSILIAILVVVGLHVLTAVALVAMKPSAPKVAPPKQTPPIEIELVSLPAALPKEPVKVVKSVEKEVTKV VIDKSTLAPKPQAIIKPKPVTETPKKPVVQERKPDITPLVKKEKTTSIAQEKPSQKQTKQEEPNPAIDKAISEQLANNQK VNNQQAEQRRLVAAQAEKAAQEAQLQQAQAQAQAQEAQRVANAKASAEAANDAAQKAARAAKQAEKAAKAAAESNEPVNF TASSANWVSAPNFSFPERVARRANSGDTLNVVLILRVNKQGGIDNVRIAQSSGNAALDKEATRQVRSGKFKPFTNNAGVP VVGNVTLPVSYAVP
Sequences:
>Translated_334_residues MSSTDLETPPLKSILIAILVVVGLHVLTAVALVAMKPSAPKVAPPKQTPPIEIELVSLPAALPKEPVKVVKSVEKEVTKV VIDKSTLAPKPQAIIKPKPVTETPKKPVVQERKPDITPLVKKEKTTSIAQEKPSQKQTKQEEPNPAIDKAISEQLANNQK VNNQQAEQRRLVAAQAEKAAQEAQLQQAQAQAQAQEAQRVANAKASAEAANDAAQKAARAAKQAEKAAKAAAESNEPVNF TASSANWVSAPNFSFPERVARRANSGDTLNVVLILRVNKQGGIDNVRIAQSSGNAALDKEATRQVRSGKFKPFTNNAGVP VVGNVTLPVSYAVP >Mature_333_residues SSTDLETPPLKSILIAILVVVGLHVLTAVALVAMKPSAPKVAPPKQTPPIEIELVSLPAALPKEPVKVVKSVEKEVTKVV IDKSTLAPKPQAIIKPKPVTETPKKPVVQERKPDITPLVKKEKTTSIAQEKPSQKQTKQEEPNPAIDKAISEQLANNQKV NNQQAEQRRLVAAQAEKAAQEAQLQQAQAQAQAQEAQRVANAKASAEAANDAAQKAARAAKQAEKAAKAAAESNEPVNFT ASSANWVSAPNFSFPERVARRANSGDTLNVVLILRVNKQGGIDNVRIAQSSGNAALDKEATRQVRSGKFKPFTNNAGVPV VGNVTLPVSYAVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35512; Mature: 35381
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTDLETPPLKSILIAILVVVGLHVLTAVALVAMKPSAPKVAPPKQTPPIEIELVSLPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC ALPKEPVKVVKSVEKEVTKVVIDKSTLAPKPQAIIKPKPVTETPKKPVVQERKPDITPLV CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHH KKEKTTSIAQEKPSQKQTKQEEPNPAIDKAISEQLANNQKVNNQQAEQRRLVAAQAEKAA HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QEAQLQQAQAQAQAQEAQRVANAKASAEAANDAAQKAARAAKQAEKAAKAAAESNEPVNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE TASSANWVSAPNFSFPERVARRANSGDTLNVVLILRVNKQGGIDNVRIAQSSGNAALDKE EECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCHHHHH ATRQVRSGKFKPFTNNAGVPVVGNVTLPVSYAVP HHHHHHCCCCCCCCCCCCCCEEECEEEEEEECCC >Mature Secondary Structure SSTDLETPPLKSILIAILVVVGLHVLTAVALVAMKPSAPKVAPPKQTPPIEIELVSLPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC ALPKEPVKVVKSVEKEVTKVVIDKSTLAPKPQAIIKPKPVTETPKKPVVQERKPDITPLV CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHH KKEKTTSIAQEKPSQKQTKQEEPNPAIDKAISEQLANNQKVNNQQAEQRRLVAAQAEKAA HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QEAQLQQAQAQAQAQEAQRVANAKASAEAANDAAQKAARAAKQAEKAAKAAAESNEPVNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE TASSANWVSAPNFSFPERVARRANSGDTLNVVLILRVNKQGGIDNVRIAQSSGNAALDKE EECCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCHHHHH ATRQVRSGKFKPFTNNAGVPVVGNVTLPVSYAVP HHHHHHCCCCCCCCCCCCCCEEECEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA