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The map label for this gene is 93006701

Identifier: 93006701

GI number: 93006701

Start: 2317793

End: 2318878

Strand: Reverse

Name: 93006701

Synonym: Pcryo_1877

Alternate gene names: NA

Gene position: 2318878-2317793 (Counterclockwise)

Preceding gene: 93006702

Following gene: 93006700

Centisome position: 75.78

GC content: 38.4

Gene sequence:

>1086_bases
ATGAAAAAACTACTTTTAGCTACAGCAATCGCTGCCCTATCTGTATCTGCAGCCAATGCAGCACCAACTGTTTATGGTAA
AGCTTTCGTTGCTATGGACTATGTTAATGCTGAATTTGATGGCCCTGCTGGCAACATGTATGATGAAGATACAGTAGAGA
TCAACTCTCATGCTTCACGTTTAGGCTTTAAAGGTTCTGAAGCTATGACTGCTAACACTGATGTTATCTATCAGTTAGAG
TATGGCACAAAGGTTGATGGTGATAAAAATGGTTTTACTAACCGTGATACATTCCTTGGTGTAAACAACAAACAATTTGG
TGAGTTCCGTGTTGGTAAAAACCAATCAACGCTTGCTCGTATTGATAACGTTGTTGTTAACCAAGGTTATTTTGATAACT
TAGGTACTACTCAAAATGAGAATGAAGTTGTTGAAGCATTAAACATGGCTGATAGTAACCGTATCGCAAGTTCAATCATC
TGGACTGCACCTAAGTATAACGGTCTACCATTACAATTATCTGCTATGTATAGCTCTGATGATGTAAATGGTAACGATAA
CTCTGGCTTTGGCGTAGCAATGTTGTTTGATCAAGGTACTGGCTTCACTGCTGGTGTTGCTTATGATAAAGATCAAAACA
TCCTCGGTGATATCATCCGTGGTACTGCTACTGTAGATCTAAGCAAGTTTATCGCTGCTCCTGTAACACTAGGCGCGCTA
TATCAAGTAGCTGATTACGATGGTCTTGATAGAAATGGCAAGATAACAGGTGCTGAGAAAGAAAAAGGCTTAGTAATTAG
TGCTGAGATGCCTTTAGCTAACTTTGCTCGCCCAGCGTCTATCTATACTCAGTATAACAAAACTGACAATTTAAATGGTT
TTGATAATGCTGATTCAGATCAAATCGTTGTTGGTGGCAAATACATGTATAAAGACAACATCATTGCTCATGCCTATGCT
GGTATGAACAAAGCTGATAATGTTAACTATGCATATAAAGCTACTCCAAATGCTACTTCATATACTAATGTACGTGGTGA
TGCAGAAGTATTCGTTATCGGTACTGGTCTAGAATACAAATTCTAA

Upstream 100 bases:

>100_bases
CAGTTACACATTATATCTTTGAGGATTTGTGACGATACCATTTGGGCAACGGCTAATAATAGCTCGCTCATTACTAAAAT
TGTAAAGTGGAGATACCCCC

Downstream 100 bases:

>100_bases
ATCTATCATTATAAAGTAAGAACATAAAAAAAGGCCTATCAAAATTGATAGGCCTTTTTTTGTGCATCTTAATGCTTTCT
TAACGGCCTTAGTGTCATTG

Product: porin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKKLLLATAIAALSVSAANAAPTVYGKAFVAMDYVNAEFDGPAGNMYDEDTVEINSHASRLGFKGSEAMTANTDVIYQLE
YGTKVDGDKNGFTNRDTFLGVNNKQFGEFRVGKNQSTLARIDNVVVNQGYFDNLGTTQNENEVVEALNMADSNRIASSII
WTAPKYNGLPLQLSAMYSSDDVNGNDNSGFGVAMLFDQGTGFTAGVAYDKDQNILGDIIRGTATVDLSKFIAAPVTLGAL
YQVADYDGLDRNGKITGAEKEKGLVISAEMPLANFARPASIYTQYNKTDNLNGFDNADSDQIVVGGKYMYKDNIIAHAYA
GMNKADNVNYAYKATPNATSYTNVRGDAEVFVIGTGLEYKF

Sequences:

>Translated_361_residues
MKKLLLATAIAALSVSAANAAPTVYGKAFVAMDYVNAEFDGPAGNMYDEDTVEINSHASRLGFKGSEAMTANTDVIYQLE
YGTKVDGDKNGFTNRDTFLGVNNKQFGEFRVGKNQSTLARIDNVVVNQGYFDNLGTTQNENEVVEALNMADSNRIASSII
WTAPKYNGLPLQLSAMYSSDDVNGNDNSGFGVAMLFDQGTGFTAGVAYDKDQNILGDIIRGTATVDLSKFIAAPVTLGAL
YQVADYDGLDRNGKITGAEKEKGLVISAEMPLANFARPASIYTQYNKTDNLNGFDNADSDQIVVGGKYMYKDNIIAHAYA
GMNKADNVNYAYKATPNATSYTNVRGDAEVFVIGTGLEYKF
>Mature_361_residues
MKKLLLATAIAALSVSAANAAPTVYGKAFVAMDYVNAEFDGPAGNMYDEDTVEINSHASRLGFKGSEAMTANTDVIYQLE
YGTKVDGDKNGFTNRDTFLGVNNKQFGEFRVGKNQSTLARIDNVVVNQGYFDNLGTTQNENEVVEALNMADSNRIASSII
WTAPKYNGLPLQLSAMYSSDDVNGNDNSGFGVAMLFDQGTGFTAGVAYDKDQNILGDIIRGTATVDLSKFIAAPVTLGAL
YQVADYDGLDRNGKITGAEKEKGLVISAEMPLANFARPASIYTQYNKTDNLNGFDNADSDQIVVGGKYMYKDNIIAHAYA
GMNKADNVNYAYKATPNATSYTNVRGDAEVFVIGTGLEYKF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38896; Mature: 38896

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLATAIAALSVSAANAAPTVYGKAFVAMDYVNAEFDGPAGNMYDEDTVEINSHASR
CCHHHHHHHHHHHHEECCCCCCCHHCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHH
LGFKGSEAMTANTDVIYQLEYGTKVDGDKNGFTNRDTFLGVNNKQFGEFRVGKNQSTLAR
CCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHH
IDNVVVNQGYFDNLGTTQNENEVVEALNMADSNRIASSIIWTAPKYNGLPLQLSAMYSSD
HHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEEEEEEECCC
DVNGNDNSGFGVAMLFDQGTGFTAGVAYDKDQNILGDIIRGTATVDLSKFIAAPVTLGAL
CCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHH
YQVADYDGLDRNGKITGAEKEKGLVISAEMPLANFARPASIYTQYNKTDNLNGFDNADSD
HHHHCCCCCCCCCEEECCCCCCCEEEEECCCHHHCCCCHHEEEEECCCCCCCCCCCCCCC
QIVVGGKYMYKDNIIAHAYAGMNKADNVNYAYKATPNATSYTNVRGDAEVFVIGTGLEYK
EEEECCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEEECCCCCC
F
C
>Mature Secondary Structure
MKKLLLATAIAALSVSAANAAPTVYGKAFVAMDYVNAEFDGPAGNMYDEDTVEINSHASR
CCHHHHHHHHHHHHEECCCCCCCHHCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHH
LGFKGSEAMTANTDVIYQLEYGTKVDGDKNGFTNRDTFLGVNNKQFGEFRVGKNQSTLAR
CCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHH
IDNVVVNQGYFDNLGTTQNENEVVEALNMADSNRIASSIIWTAPKYNGLPLQLSAMYSSD
HHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEEEEEEECCC
DVNGNDNSGFGVAMLFDQGTGFTAGVAYDKDQNILGDIIRGTATVDLSKFIAAPVTLGAL
CCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHH
YQVADYDGLDRNGKITGAEKEKGLVISAEMPLANFARPASIYTQYNKTDNLNGFDNADSD
HHHHCCCCCCCCCEEECCCCCCCEEEEECCCHHHCCCCHHEEEEECCCCCCCCCCCCCCC
QIVVGGKYMYKDNIIAHAYAGMNKADNVNYAYKATPNATSYTNVRGDAEVFVIGTGLEYK
EEEECCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEEECCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA