| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006638
Identifier: 93006638
GI number: 93006638
Start: 2239711
End: 2240700
Strand: Reverse
Name: 93006638
Synonym: Pcryo_1814
Alternate gene names: NA
Gene position: 2240700-2239711 (Counterclockwise)
Preceding gene: 93006639
Following gene: 93006637
Centisome position: 73.23
GC content: 45.25
Gene sequence:
>990_bases ATGTATCAAGACCATATCGTCATTGACGGCTTACAGTATAGCCATTGGGATCGTGACTATTTCAAAATGCTGCAAGCCAG CGGTATCAATGCGGTACATGCCACCTTGGTTTATCACGAGGATTCGCGGCAGACAATGACACGCTTTGCAGAATGGCATG CACGCTTTGAGCAAAACTCAGATCTTATCTTACCAGTGTATTCAGTTACTGATATTGAGATGGCAAAGCAGCAAGGTAAA GTCGGTATCCTTTTTGGCGCGCAAAATTGTTCACCGATTGATGATGAAATTGGGCTTATCAGCGTGATGCGCCGCTTAGG ACTACTGATCATGCAGCTGACGTATAACAACCAAAGCCTACTAGCAACCGGTTGTTATGAGAAGAATGATAGTGGCATTA CGCGCTTTGGTCAGCAGGCGATAGCAGAGATGAATCGAGTTGGGATGATTATCGATATGTCGCATAGCGCAGAGCGTTCA ACGCTTGAAGCGATCGAGTATTCTACGCGCCCGATATGTATCAGTCATGCCAATCCAACGGCTGCACACGATGCGCTGCG TAATAAATCTGATGCCGTTATTAGTGCCTTAACCAAAGCGGGCGGGCTGTTAGGTTTTAGCCTATATCCGTTTCATTTGC CGAATGGTAGTGATTGTACGCTCAATGATTTTTGCAGCATGGTTGCTGATTGTGCCGATAAATATGGCGTTGAGCATTTA GCCATTGGTAGTGACTTGTGCCTGAACCAACCGCAAGCGGTACTTGAATGGATGCGCAATGGACGCTGGTCAAAGGCAAT GGATTATGGCGAAGGTAATGCCAACAATTCAGGTTGGCCAGATACTTTGCCATGGTTTGCAGGCAAGGACGGGATGGAGA ATATTTATAACGGTCTGCTCAAACATGGTTTTAATGATGCTGATGCTGGAAAAATCATTGGACAAAACTGGTTTAATTTT CTTGAGAGTGGCATTAAGCCTTTAGTATAA
Upstream 100 bases:
>100_bases CTTATTAAGAGTCAGTTAATGACAGGTGCTAATAGTGATGTGTGGCTGGTAAAGATTCTCCTGCCACAATGCATTCGTAA AAGTATAAAAGGAATTAACC
Downstream 100 bases:
>100_bases ATGCTAGGCACAGATGTAGCTTTCTAAAATGCTGGCTAAAACTCAAAGTAATAAGCATTAAAGTAACAAGCATTAAAATA TAGATGGGTAAGACGGTTTA
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Microsomal Dipeptidase; Glutamine Amidotransferase; Zn-Dependent Dipeptidase; M19 Family Peptidase; Dipeptidase Protein; Twin-Arginine Translocation Pathway Signal; Thermostable Dipeptidase; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Renal Dipeptidase; Renal Dipeptidase Superfamily; Dipeptidase Family Protein; Multidrug Resistance Protein B; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; M19 Family Membrane Dipeptidase; LOW QUALITY PROTEIN Dipeptidase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MYQDHIVIDGLQYSHWDRDYFKMLQASGINAVHATLVYHEDSRQTMTRFAEWHARFEQNSDLILPVYSVTDIEMAKQQGK VGILFGAQNCSPIDDEIGLISVMRRLGLLIMQLTYNNQSLLATGCYEKNDSGITRFGQQAIAEMNRVGMIIDMSHSAERS TLEAIEYSTRPICISHANPTAAHDALRNKSDAVISALTKAGGLLGFSLYPFHLPNGSDCTLNDFCSMVADCADKYGVEHL AIGSDLCLNQPQAVLEWMRNGRWSKAMDYGEGNANNSGWPDTLPWFAGKDGMENIYNGLLKHGFNDADAGKIIGQNWFNF LESGIKPLV
Sequences:
>Translated_329_residues MYQDHIVIDGLQYSHWDRDYFKMLQASGINAVHATLVYHEDSRQTMTRFAEWHARFEQNSDLILPVYSVTDIEMAKQQGK VGILFGAQNCSPIDDEIGLISVMRRLGLLIMQLTYNNQSLLATGCYEKNDSGITRFGQQAIAEMNRVGMIIDMSHSAERS TLEAIEYSTRPICISHANPTAAHDALRNKSDAVISALTKAGGLLGFSLYPFHLPNGSDCTLNDFCSMVADCADKYGVEHL AIGSDLCLNQPQAVLEWMRNGRWSKAMDYGEGNANNSGWPDTLPWFAGKDGMENIYNGLLKHGFNDADAGKIIGQNWFNF LESGIKPLV >Mature_329_residues MYQDHIVIDGLQYSHWDRDYFKMLQASGINAVHATLVYHEDSRQTMTRFAEWHARFEQNSDLILPVYSVTDIEMAKQQGK VGILFGAQNCSPIDDEIGLISVMRRLGLLIMQLTYNNQSLLATGCYEKNDSGITRFGQQAIAEMNRVGMIIDMSHSAERS TLEAIEYSTRPICISHANPTAAHDALRNKSDAVISALTKAGGLLGFSLYPFHLPNGSDCTLNDFCSMVADCADKYGVEHL AIGSDLCLNQPQAVLEWMRNGRWSKAMDYGEGNANNSGWPDTLPWFAGKDGMENIYNGLLKHGFNDADAGKIIGQNWFNF LESGIKPLV
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI189458885, Length=197, Percent_Identity=26.9035532994924, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4758190, Length=197, Percent_Identity=26.9035532994924, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI11641269, Length=146, Percent_Identity=28.7671232876712, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI193211608, Length=187, Percent_Identity=28.3422459893048, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI193211610, Length=187, Percent_Identity=28.3422459893048, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI281362638, Length=185, Percent_Identity=27.027027027027, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI281362636, Length=185, Percent_Identity=27.027027027027, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI161083233, Length=220, Percent_Identity=24.5454545454545, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI221475880, Length=243, Percent_Identity=24.2798353909465, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36615; Mature: 36615
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQDHIVIDGLQYSHWDRDYFKMLQASGINAVHATLVYHEDSRQTMTRFAEWHARFEQNS CCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCC DLILPVYSVTDIEMAKQQGKVGILFGAQNCSPIDDEIGLISVMRRLGLLIMQLTYNNQSL CEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCEE LATGCYEKNDSGITRFGQQAIAEMNRVGMIIDMSHSAERSTLEAIEYSTRPICISHANPT EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCH AAHDALRNKSDAVISALTKAGGLLGFSLYPFHLPNGSDCTLNDFCSMVADCADKYGVEHL HHHHHHCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEE AIGSDLCLNQPQAVLEWMRNGRWSKAMDYGEGNANNSGWPDTLPWFAGKDGMENIYNGLL ECCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KHGFNDADAGKIIGQNWFNFLESGIKPLV HCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYQDHIVIDGLQYSHWDRDYFKMLQASGINAVHATLVYHEDSRQTMTRFAEWHARFEQNS CCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCC DLILPVYSVTDIEMAKQQGKVGILFGAQNCSPIDDEIGLISVMRRLGLLIMQLTYNNQSL CEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCEE LATGCYEKNDSGITRFGQQAIAEMNRVGMIIDMSHSAERSTLEAIEYSTRPICISHANPT EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCH AAHDALRNKSDAVISALTKAGGLLGFSLYPFHLPNGSDCTLNDFCSMVADCADKYGVEHL HHHHHHCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEE AIGSDLCLNQPQAVLEWMRNGRWSKAMDYGEGNANNSGWPDTLPWFAGKDGMENIYNGLL ECCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KHGFNDADAGKIIGQNWFNFLESGIKPLV HCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA