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The map label for this gene is pucA [H]

Identifier: 93006630

GI number: 93006630

Start: 2228827

End: 2230176

Strand: Reverse

Name: pucA [H]

Synonym: Pcryo_1806

Alternate gene names: 93006630

Gene position: 2230176-2228827 (Counterclockwise)

Preceding gene: 93006631

Following gene: 93006629

Centisome position: 72.88

GC content: 44.15

Gene sequence:

>1350_bases
ATGAATCAAACTGCTGATATCCTTGACCTTGCTGAGCAAGCGATACAACAAAACATCGATGCCGTATTAGCTACCGTAGT
TCGTACAGAAGGCTCGGCGTATCGGCAACCGGGTGCGATGATGCTTATCTGCGCTGATGGACGTTCGGTTGGGATGATTA
GCGGCGGCTGCCTTGAGCCGCATATTATCAAACGCGCGTTTTGGCTGACCCGTTATAGCGCGAGCGTCCAGATATACCAA
ACAGGGGATGATATTGGATATCATAACAATGGCGATCCTGATTCAACTGTTGTAGAAGAAGGCACTACTGTCAAAGATGA
AGATAGGTCTGAAGACGATTTTTTAGAGGGTGAGCTCAATTTTGGCTTGGGTTGTAATGGACGAATACATGTCTTATTTG
AGCGTTTATCGACAGCGATATCGTTACTTGATCTCATCCGTCAGGTTCGCCATACTCAACAGCCAGTAACAATTGCCACT
CTTATTAGATCGGGTAGTAGCGAATATAAAGGGATTGACCTGCAAGTTGGTACCCGTATTTATTTAAATCAGTATTTAAA
AACGGGAAATCTGGCTGATTTATATTTGAACCGCAACACGATAAGCGATTCGAATACGTTTATAGATGATATGTTGTTAA
ATACCATTCAAAAACTATCAAACCATAAGTTTCATAAAAAAAATGCTGAATACATTAAGTTAACGAGCGATCTAGAGCTA
CAAGCTACATGTGATCGGAAGCATGAGAGTGAGTGGTTATTGCAGCGGATTTACCCACAAAACCGATTACTGATTTGCGG
GGCAGGTAACGATGTTCTACCGCTGGTGACAATGGCAAAGCTACAAGATTGGCATGTCACCGTCATAGACAGTCGTCCAC
AATATGCGACACGTCTGCGCTTTAGCCAAGCAGACTCAGTACTGTGCGTGGCTTTGGATGATAGTGAAACATTGCTCAAT
CTCAGTGCTGGCGCCGCCGTTGCTGTGATGTCTCATAGTCTGGCCCAAGACCGCGCCCGACTAGCCGTACTACTAGAGCA
TTCTGCTCAATATCGTTATCTTGGACAACTGGGACCTCGCTATCGTACTGAGCGTTTGATCAAAGAAATTAGTGAGACAA
GTGCTAACCCACATATTTTAGCTGATGGTATTTGTAAACTGCATTATCCTATCGGTTATAAGTTGGGTGGGGATGGACCT
GAAGCATTGGCACTCAGTATCATGGCACAAATGAGCGCCGTGATTCATGGGCACGCGCCACAAACCTTACTGCCAAATAG
TCAATATACTATTCAAACCTCAAAGCAATCAGGCTTCAATACCTATAAAAATGATTACGCCCATGACTAG

Upstream 100 bases:

>100_bases
TGATTCTTATCAAATACTGTTTTGCTTAAAAAAACCCGATTAAACAGCGGGTTTTTTTAGCTTATTCTCTAAGCTTATTG
ATAAGTCTATAAGGAACGTT

Downstream 100 bases:

>100_bases
CGATGTTGATACTAATAATTCTATTTTACCAACGAAAACGCCATTGCCCAGCAGTACAGAAAATAATAAACAAAACCACA
CTGTTATTATTTTAGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: XDHase subunit A [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MNQTADILDLAEQAIQQNIDAVLATVVRTEGSAYRQPGAMMLICADGRSVGMISGGCLEPHIIKRAFWLTRYSASVQIYQ
TGDDIGYHNNGDPDSTVVEEGTTVKDEDRSEDDFLEGELNFGLGCNGRIHVLFERLSTAISLLDLIRQVRHTQQPVTIAT
LIRSGSSEYKGIDLQVGTRIYLNQYLKTGNLADLYLNRNTISDSNTFIDDMLLNTIQKLSNHKFHKKNAEYIKLTSDLEL
QATCDRKHESEWLLQRIYPQNRLLICGAGNDVLPLVTMAKLQDWHVTVIDSRPQYATRLRFSQADSVLCVALDDSETLLN
LSAGAAVAVMSHSLAQDRARLAVLLEHSAQYRYLGQLGPRYRTERLIKEISETSANPHILADGICKLHYPIGYKLGGDGP
EALALSIMAQMSAVIHGHAPQTLLPNSQYTIQTSKQSGFNTYKNDYAHD

Sequences:

>Translated_449_residues
MNQTADILDLAEQAIQQNIDAVLATVVRTEGSAYRQPGAMMLICADGRSVGMISGGCLEPHIIKRAFWLTRYSASVQIYQ
TGDDIGYHNNGDPDSTVVEEGTTVKDEDRSEDDFLEGELNFGLGCNGRIHVLFERLSTAISLLDLIRQVRHTQQPVTIAT
LIRSGSSEYKGIDLQVGTRIYLNQYLKTGNLADLYLNRNTISDSNTFIDDMLLNTIQKLSNHKFHKKNAEYIKLTSDLEL
QATCDRKHESEWLLQRIYPQNRLLICGAGNDVLPLVTMAKLQDWHVTVIDSRPQYATRLRFSQADSVLCVALDDSETLLN
LSAGAAVAVMSHSLAQDRARLAVLLEHSAQYRYLGQLGPRYRTERLIKEISETSANPHILADGICKLHYPIGYKLGGDGP
EALALSIMAQMSAVIHGHAPQTLLPNSQYTIQTSKQSGFNTYKNDYAHD
>Mature_449_residues
MNQTADILDLAEQAIQQNIDAVLATVVRTEGSAYRQPGAMMLICADGRSVGMISGGCLEPHIIKRAFWLTRYSASVQIYQ
TGDDIGYHNNGDPDSTVVEEGTTVKDEDRSEDDFLEGELNFGLGCNGRIHVLFERLSTAISLLDLIRQVRHTQQPVTIAT
LIRSGSSEYKGIDLQVGTRIYLNQYLKTGNLADLYLNRNTISDSNTFIDDMLLNTIQKLSNHKFHKKNAEYIKLTSDLEL
QATCDRKHESEWLLQRIYPQNRLLICGAGNDVLPLVTMAKLQDWHVTVIDSRPQYATRLRFSQADSVLCVALDDSETLLN
LSAGAAVAVMSHSLAQDRARLAVLLEHSAQYRYLGQLGPRYRTERLIKEISETSANPHILADGICKLHYPIGYKLGGDGP
EALALSIMAQMSAVIHGHAPQTLLPNSQYTIQTSKQSGFNTYKNDYAHD

Specific function: Oxidizes hypoxanthine and xanthine to uric acid. PucA subunit could exert a molybdenum cofactor recruiting function [H]

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 49956; Mature: 49956

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTADILDLAEQAIQQNIDAVLATVVRTEGSAYRQPGAMMLICADGRSVGMISGGCLEP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCH
HIIKRAFWLTRYSASVQIYQTGDDIGYHNNGDPDSTVVEEGTTVKDEDRSEDDFLEGELN
HHHHHHHHHEEEECEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
FGLGCNGRIHVLFERLSTAISLLDLIRQVRHTQQPVTIATLIRSGSSEYKGIDLQVGTRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCEEEEECCHH
YLNQYLKTGNLADLYLNRNTISDSNTFIDDMLLNTIQKLSNHKFHKKNAEYIKLTSDLEL
HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
QATCDRKHESEWLLQRIYPQNRLLICGAGNDVLPLVTMAKLQDWHVTVIDSRPQYATRLR
EECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCHHHHEE
FSQADSVLCVALDDSETLLNLSAGAAVAVMSHSLAQDRARLAVLLEHSAQYRYLGQLGPR
CCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHEEHEECCCCCHHHHHHCCCH
YRTERLIKEISETSANPHILADGICKLHYPIGYKLGGDGPEALALSIMAQMSAVIHGHAP
HHHHHHHHHHHHCCCCCCEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
QTLLPNSQYTIQTSKQSGFNTYKNDYAHD
CCCCCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQTADILDLAEQAIQQNIDAVLATVVRTEGSAYRQPGAMMLICADGRSVGMISGGCLEP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCH
HIIKRAFWLTRYSASVQIYQTGDDIGYHNNGDPDSTVVEEGTTVKDEDRSEDDFLEGELN
HHHHHHHHHEEEECEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
FGLGCNGRIHVLFERLSTAISLLDLIRQVRHTQQPVTIATLIRSGSSEYKGIDLQVGTRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCEEEEECCHH
YLNQYLKTGNLADLYLNRNTISDSNTFIDDMLLNTIQKLSNHKFHKKNAEYIKLTSDLEL
HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
QATCDRKHESEWLLQRIYPQNRLLICGAGNDVLPLVTMAKLQDWHVTVIDSRPQYATRLR
EECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCHHHHEE
FSQADSVLCVALDDSETLLNLSAGAAVAVMSHSLAQDRARLAVLLEHSAQYRYLGQLGPR
CCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHEEHEECCCCCHHHHHHCCCH
YRTERLIKEISETSANPHILADGICKLHYPIGYKLGGDGPEALALSIMAQMSAVIHGHAP
HHHHHHHHHHHHCCCCCCEEECCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
QTLLPNSQYTIQTSKQSGFNTYKNDYAHD
CCCCCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]