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The map label for this gene is yagR [H]

Identifier: 93006631

GI number: 93006631

Start: 2230274

End: 2232727

Strand: Reverse

Name: yagR [H]

Synonym: Pcryo_1807

Alternate gene names: 93006631

Gene position: 2232727-2230274 (Counterclockwise)

Preceding gene: 93006632

Following gene: 93006630

Centisome position: 72.97

GC content: 45.48

Gene sequence:

>2454_bases
ATGTCACTATTGGACGCAGTACTGCCATCAGAACCCACAAAAAAACTGACCATGGATAACCCAGTTGATACTCTTTTTGA
TAAAACTGCCAGTCAATTGGTTGGTAAACCTATCAACCGTGTAGACGGTTCCTTGAAAGTCAGTGGACAAGCGACTTATA
GCGCAGAATTTTATGTTGAAGGGCAGGTGTATGGCGTCTTAGTGGGTGCGACCATTGCTAAAGGCAAGGTGAAGCACATC
GATAGCCATGCAGTAGAGGCGATTCCAGGTATTATTAAAGTGGTTACTGATCCCGAGCATTTTTTGCGTAATGCTCAGCA
AGGCGGAGAGAAAAAAGCACCCACTCAAGGCGTCGCTGAAATTTTTTACCATGGTCAGCCCATAGCTGCCGTAATCGCTG
AAACCTTTGAAGCGGCTACTGAAGGCGCAAAAGCCCTCAAGGTGACTTATGAAGATGAAACAGCAAATGCTGTGATAGAT
TTCAGCTCAGCATTGGGAAATGCGCATTCGGTTGATGAAAACAAAGGTTCGGACAAGAATTATAAGCAGGGCTACCCAGA
GCAAGCACTTAAAGAGTCTGAGGTTTCGTTTGATCAGATTTATCATACGCCAAGCCAGAGTAGTTCGCCCATGGAGCCAC
ATGCTACATTGGCTTATTGGGAGGATGAAAAGTTAGTATTGTATACGGCCAATCAGATGTTGTCATCTTGCAAACAACAA
GTGGCGGATGCCTTAAATTTGGATCCAGATAATGTACAACTGATTGCTCATTACGTTGGTGGCGGTTTTGGCAGTAAACT
TGGCATTGCACCCGAATCGATTGCCGCAGCCATTTCTGCAAAAGAGCTTAAGCGTCCGGTATTGATTGTGATGACTCGCC
CGCAAGTCATGGAAACCACTATAAGGCGCTCAGATACGCGTCAACGGATTGGCATCGGCTGTAATAAGAACGGTATTATT
AATACTTTTATCCATAATACCATCACTAGCAATTTACCCGGCGAGAGCTTCTTTGAGCCTGCAGCGCTGTCTACTCACTA
TCTATACCGCGGTGAAAATCGTCAGGTCGAATATCAGATGGTTGATGTCAATAAAGTATTATCAGGTTCAATGCGCGCTC
CTGGGGAAGCAGTGGGGTTAATTGCTGTTGAATGTGCAATGGACGAGTTGGCCATTCAATTAGATATGGATCCTATAGAG
CTACGCCGCCGTAATGAGCCTCATCAGGATCCTAGTAAAGAAATACCTTTTTCAACTCGACAGCTGATCGCCTGTATGGA
AAAAGGGGCTGAGCAGTTTGGTTGGGAGAAACGCAATAAAATACCCGCCAAGCGCTTAGAAGGAGACTGGTGGTTGGGTA
TCGGTATGGCTGCCGCTGCCCGTGGTAATCAGTTAAAGCTTTCTGAAGCAAGAGCAACCCTACAAATCGATGACTCAAAA
AATCTTGGGATCAAAGCCATTATTGAAACGGATATGACCGATATTGGTACGGGCTCCTATACCGTATTTACCCAAATTGC
TGCTGACCTACTTGGTCTACCGGTTGACCATATTGAGATGAAACTTGGCGATACCAGTATGCCGCCAGCCGTTGGTTCAG
GCGGTAGCATGGGTGCGGCAAGCTCAGGTAGCAGTATTTATCTGGCGTGTCAGCAATTGCGTGAAATGCTGGCAGACAAA
GTCGGACTATATTCCGACACCATCCAGCTAAATGACGGTCAGATCAGTGAAATAGGAGAGCATGAAGTTACAGCAACAGA
GACTATCATTGAATCTGGTAAGGATGTCACCACTGAACTTGTAGAGAAGTTAGCAGAAAAAACGAGCGTGCCTCTCCCTG
AATCTGTATTGGAACGCTTGCCGGAGAAGCAGGAGGCTAAACAAAGCAGGTATGATTTTAGTGGCCATAATAGTTATTCA
CTAGCCGATATTATCGCGCAATATGACGACCAAAAGTTAAGTGCTAAAGGCAAGATTAAACCGGGTAAAAATGAAAAAAC
CCATCGCCAATCTTCATTCGGTGCCAATTTTGCGGAAGTCGCTGTGCACCGAGTAACTGGTGAGATTCGAGTCAAGCGTA
TGACAGGTGTGTTCGCCGCAGGGCGTATCCTCAATCACAAAACTGCTACTTCACAGTGCTATGGTGGTATGGTTTTTGGC
ATAGGTTCGGCGTTAATGGAAGAAGTTATCCATGATAAGCATGACGGGCGCTTGTGTAATCATGACCTCTCTGAATACCA
TATTCCTGTGAATGCTGATGTACCACAATTGGATGTTATTTTGCTAGAAGAAGACGACCGTTATACCAATCCAATGCATA
TCAAAGGCATTGGTGAAACGGCGATTTCAGGCGCTGCAGCAGCGATTGCAAATGCTATCTATAATGCGGTCGGTATCCGG
GTTCGAGATTTCCCCATTACTCTAGATAAGCTTATTGACCAACTGCCAGATTGA

Upstream 100 bases:

>100_bases
ATGCCAAGGGTAGTGGTCAGAACGATTTTAAGATACCGCTGACGAGTCGCTTGTTAAAGCAAGTTATTGAGCGCGCACTA
ACGGGTAAGGGAGCATAATC

Downstream 100 bases:

>100_bases
TTCTTATCAAATACTGTTTTGCTTAAAAAAACCCGATTAAACAGCGGGTTTTTTTAGCTTATTCTCTAAGCTTATTGATA
AGTCTATAAGGAACGTTATG

Product: aldehyde oxidase and xanthine dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 817; Mature: 816

Protein sequence:

>817_residues
MSLLDAVLPSEPTKKLTMDNPVDTLFDKTASQLVGKPINRVDGSLKVSGQATYSAEFYVEGQVYGVLVGATIAKGKVKHI
DSHAVEAIPGIIKVVTDPEHFLRNAQQGGEKKAPTQGVAEIFYHGQPIAAVIAETFEAATEGAKALKVTYEDETANAVID
FSSALGNAHSVDENKGSDKNYKQGYPEQALKESEVSFDQIYHTPSQSSSPMEPHATLAYWEDEKLVLYTANQMLSSCKQQ
VADALNLDPDNVQLIAHYVGGGFGSKLGIAPESIAAAISAKELKRPVLIVMTRPQVMETTIRRSDTRQRIGIGCNKNGII
NTFIHNTITSNLPGESFFEPAALSTHYLYRGENRQVEYQMVDVNKVLSGSMRAPGEAVGLIAVECAMDELAIQLDMDPIE
LRRRNEPHQDPSKEIPFSTRQLIACMEKGAEQFGWEKRNKIPAKRLEGDWWLGIGMAAAARGNQLKLSEARATLQIDDSK
NLGIKAIIETDMTDIGTGSYTVFTQIAADLLGLPVDHIEMKLGDTSMPPAVGSGGSMGAASSGSSIYLACQQLREMLADK
VGLYSDTIQLNDGQISEIGEHEVTATETIIESGKDVTTELVEKLAEKTSVPLPESVLERLPEKQEAKQSRYDFSGHNSYS
LADIIAQYDDQKLSAKGKIKPGKNEKTHRQSSFGANFAEVAVHRVTGEIRVKRMTGVFAAGRILNHKTATSQCYGGMVFG
IGSALMEEVIHDKHDGRLCNHDLSEYHIPVNADVPQLDVILLEEDDRYTNPMHIKGIGETAISGAAAAIANAIYNAVGIR
VRDFPITLDKLIDQLPD

Sequences:

>Translated_817_residues
MSLLDAVLPSEPTKKLTMDNPVDTLFDKTASQLVGKPINRVDGSLKVSGQATYSAEFYVEGQVYGVLVGATIAKGKVKHI
DSHAVEAIPGIIKVVTDPEHFLRNAQQGGEKKAPTQGVAEIFYHGQPIAAVIAETFEAATEGAKALKVTYEDETANAVID
FSSALGNAHSVDENKGSDKNYKQGYPEQALKESEVSFDQIYHTPSQSSSPMEPHATLAYWEDEKLVLYTANQMLSSCKQQ
VADALNLDPDNVQLIAHYVGGGFGSKLGIAPESIAAAISAKELKRPVLIVMTRPQVMETTIRRSDTRQRIGIGCNKNGII
NTFIHNTITSNLPGESFFEPAALSTHYLYRGENRQVEYQMVDVNKVLSGSMRAPGEAVGLIAVECAMDELAIQLDMDPIE
LRRRNEPHQDPSKEIPFSTRQLIACMEKGAEQFGWEKRNKIPAKRLEGDWWLGIGMAAAARGNQLKLSEARATLQIDDSK
NLGIKAIIETDMTDIGTGSYTVFTQIAADLLGLPVDHIEMKLGDTSMPPAVGSGGSMGAASSGSSIYLACQQLREMLADK
VGLYSDTIQLNDGQISEIGEHEVTATETIIESGKDVTTELVEKLAEKTSVPLPESVLERLPEKQEAKQSRYDFSGHNSYS
LADIIAQYDDQKLSAKGKIKPGKNEKTHRQSSFGANFAEVAVHRVTGEIRVKRMTGVFAAGRILNHKTATSQCYGGMVFG
IGSALMEEVIHDKHDGRLCNHDLSEYHIPVNADVPQLDVILLEEDDRYTNPMHIKGIGETAISGAAAAIANAIYNAVGIR
VRDFPITLDKLIDQLPD
>Mature_816_residues
SLLDAVLPSEPTKKLTMDNPVDTLFDKTASQLVGKPINRVDGSLKVSGQATYSAEFYVEGQVYGVLVGATIAKGKVKHID
SHAVEAIPGIIKVVTDPEHFLRNAQQGGEKKAPTQGVAEIFYHGQPIAAVIAETFEAATEGAKALKVTYEDETANAVIDF
SSALGNAHSVDENKGSDKNYKQGYPEQALKESEVSFDQIYHTPSQSSSPMEPHATLAYWEDEKLVLYTANQMLSSCKQQV
ADALNLDPDNVQLIAHYVGGGFGSKLGIAPESIAAAISAKELKRPVLIVMTRPQVMETTIRRSDTRQRIGIGCNKNGIIN
TFIHNTITSNLPGESFFEPAALSTHYLYRGENRQVEYQMVDVNKVLSGSMRAPGEAVGLIAVECAMDELAIQLDMDPIEL
RRRNEPHQDPSKEIPFSTRQLIACMEKGAEQFGWEKRNKIPAKRLEGDWWLGIGMAAAARGNQLKLSEARATLQIDDSKN
LGIKAIIETDMTDIGTGSYTVFTQIAADLLGLPVDHIEMKLGDTSMPPAVGSGGSMGAASSGSSIYLACQQLREMLADKV
GLYSDTIQLNDGQISEIGEHEVTATETIIESGKDVTTELVEKLAEKTSVPLPESVLERLPEKQEAKQSRYDFSGHNSYSL
ADIIAQYDDQKLSAKGKIKPGKNEKTHRQSSFGANFAEVAVHRVTGEIRVKRMTGVFAAGRILNHKTATSQCYGGMVFGI
GSALMEEVIHDKHDGRLCNHDLSEYHIPVNADVPQLDVILLEEDDRYTNPMHIKGIGETAISGAAAAIANAIYNAVGIRV
RDFPITLDKLIDQLPD

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=549, Percent_Identity=24.2258652094718, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI71773480, Length=544, Percent_Identity=23.5294117647059, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI1786478, Length=806, Percent_Identity=39.0818858560794, Blast_Score=515, Evalue=1e-147,
Organism=Escherichia coli, GI1789230, Length=808, Percent_Identity=25.8663366336634, Blast_Score=208, Evalue=9e-55,
Organism=Escherichia coli, GI1789246, Length=591, Percent_Identity=23.5194585448393, Blast_Score=124, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17540638, Length=574, Percent_Identity=22.8222996515679, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24647195, Length=571, Percent_Identity=23.292469352014, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24647199, Length=552, Percent_Identity=23.9130434782609, Blast_Score=107, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24647193, Length=545, Percent_Identity=23.6697247706422, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24647197, Length=596, Percent_Identity=23.3221476510067, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17737937, Length=594, Percent_Identity=23.5690235690236, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24647201, Length=559, Percent_Identity=23.0769230769231, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 88881; Mature: 88749

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDAVLPSEPTKKLTMDNPVDTLFDKTASQLVGKPINRVDGSLKVSGQATYSAEFYVE
CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEECCCEEEEEEEEEC
GQVYGVLVGATIAKGKVKHIDSHAVEAIPGIIKVVTDPEHFLRNAQQGGEKKAPTQGVAE
CEEEEEEEECHHCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHH
IFYHGQPIAAVIAETFEAATEGAKALKVTYEDETANAVIDFSSALGNAHSVDENKGSDKN
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCC
YKQGYPEQALKESEVSFDQIYHTPSQSSSPMEPHATLAYWEDEKLVLYTANQMLSSCKQQ
CCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHH
VADALNLDPDNVQLIAHYVGGGFGSKLGIAPESIAAAISAKELKRPVLIVMTRPQVMETT
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
IRRSDTRQRIGIGCNKNGIINTFIHNTITSNLPGESFFEPAALSTHYLYRGENRQVEYQM
HHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE
VDVNKVLSGSMRAPGEAVGLIAVECAMDELAIQLDMDPIELRRRNEPHQDPSKEIPFSTR
EEHHHHHCCCCCCCCCHHHHEEEEHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCCCHHH
QLIACMEKGAEQFGWEKRNKIPAKRLEGDWWLGIGMAAAARGNQLKLSEARATLQIDDSK
HHHHHHHHHHHHCCCHHHCCCCHHHCCCCEEEEECHHHHCCCCEEEEECCCEEEEECCCC
NLGIKAIIETDMTDIGTGSYTVFTQIAADLLGLPVDHIEMKLGDTSMPPAVGSGGSMGAA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCC
SSGSSIYLACQQLREMLADKVGLYSDTIQLNDGQISEIGEHEVTATETIIESGKDVTTEL
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHCCCCHHHHH
VEKLAEKTSVPLPESVLERLPEKQEAKQSRYDFSGHNSYSLADIIAQYDDQKLSAKGKIK
HHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
PGKNEKTHRQSSFGANFAEVAVHRVTGEIRVKRMTGVFAAGRILNHKTATSQCYGGMVFG
CCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCHHHH
IGSALMEEVIHDKHDGRLCNHDLSEYHIPVNADVPQLDVILLEEDDRYTNPMHIKGIGET
HHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCHH
AISGAAAAIANAIYNAVGIRVRDFPITLDKLIDQLPD
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
SLLDAVLPSEPTKKLTMDNPVDTLFDKTASQLVGKPINRVDGSLKVSGQATYSAEFYVE
CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEECCCEEEEEEEEEC
GQVYGVLVGATIAKGKVKHIDSHAVEAIPGIIKVVTDPEHFLRNAQQGGEKKAPTQGVAE
CEEEEEEEECHHCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHH
IFYHGQPIAAVIAETFEAATEGAKALKVTYEDETANAVIDFSSALGNAHSVDENKGSDKN
HHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCC
YKQGYPEQALKESEVSFDQIYHTPSQSSSPMEPHATLAYWEDEKLVLYTANQMLSSCKQQ
CCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHH
VADALNLDPDNVQLIAHYVGGGFGSKLGIAPESIAAAISAKELKRPVLIVMTRPQVMETT
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
IRRSDTRQRIGIGCNKNGIINTFIHNTITSNLPGESFFEPAALSTHYLYRGENRQVEYQM
HHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE
VDVNKVLSGSMRAPGEAVGLIAVECAMDELAIQLDMDPIELRRRNEPHQDPSKEIPFSTR
EEHHHHHCCCCCCCCCHHHHEEEEHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCCCHHH
QLIACMEKGAEQFGWEKRNKIPAKRLEGDWWLGIGMAAAARGNQLKLSEARATLQIDDSK
HHHHHHHHHHHHCCCHHHCCCCHHHCCCCEEEEECHHHHCCCCEEEEECCCEEEEECCCC
NLGIKAIIETDMTDIGTGSYTVFTQIAADLLGLPVDHIEMKLGDTSMPPAVGSGGSMGAA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCC
SSGSSIYLACQQLREMLADKVGLYSDTIQLNDGQISEIGEHEVTATETIIESGKDVTTEL
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHCCCCHHHHH
VEKLAEKTSVPLPESVLERLPEKQEAKQSRYDFSGHNSYSLADIIAQYDDQKLSAKGKIK
HHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
PGKNEKTHRQSSFGANFAEVAVHRVTGEIRVKRMTGVFAAGRILNHKTATSQCYGGMVFG
CCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCHHHH
IGSALMEEVIHDKHDGRLCNHDLSEYHIPVNADVPQLDVILLEEDDRYTNPMHIKGIGET
HHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCHH
AISGAAAAIANAIYNAVGIRVRDFPITLDKLIDQLPD
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]