| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is otsB [H]
Identifier: 93006627
GI number: 93006627
Start: 2226618
End: 2227499
Strand: Reverse
Name: otsB [H]
Synonym: Pcryo_1803
Alternate gene names: 93006627
Gene position: 2227499-2226618 (Counterclockwise)
Preceding gene: 93006628
Following gene: 93006626
Centisome position: 72.8
GC content: 38.66
Gene sequence:
>882_bases GTGACTTCAGGAAGAAATCCCAGTATAAATAGGCGACCTATCTATATTCTGCCAAAAAACTTTGCTGAATATTTATGCCC TCAGCAAAATTATTATTTGTTTCTAGATATAGATGGTACGTTAGCGGATTTCACACTGAATCCAAAAGACAGCGTTATCC CAACATCAACCTTAACTCTTCTACAAAAAATACAAAGCCATGGTGTAAAACTTGCTGTCGTAACAGGACGCAGTTTGGCT GAAGCAAGGCAAATGCTGTCTCCTTTAGTGTTACCGATTGCCGCAACGCATGGACTAGAAATAGCGTTTGATGATATCAG TGATCATAATGAGACACATGTTGTATCTGTTGATATCATGGAACTTGCTGTAATAAGAAAGTCTATTATCCAATCTTGCA TTCCCTTTGATGACTTCACCGTAGAAGATAAACCCTATTCTGTCGCCCTCCATTTCCGAAAGAACCCTGTTTTGGCTGAT GCGGCTTATACCATCATGATAGAAACCTTAAAAACTTATGCTAACTGGACATTGAAATCTGGTAAATATGTTTGGGAGGT AGTGCCAAAAGGAGTGGATAAAGGTAGCGCAATTCTGACTTTATTAAAAAGAATGCAGAGTAGTAATAATATGTTCCCTA TTTTTATCGGTGATGATATTACGGATGAAGTAGGGTTTGTGGCTGTACAAGGTGAAAATCAAATAATAGCCAGTCAACCA CAGCCATTAAAAGGGATGGGGATTAAGGTTGGTAGTGAGGCTACGCATGCCAATTACTATGTACGTAATACTCATGAGGT CACCATATTACTGAATAGCTTTTTAAGCTTTTGCCAAGAGCATTCAATGCTAGCAAAAGAAACAGTGAGGCACGTGATAT GA
Upstream 100 bases:
>100_bases AGATCTATATTAAAAACGACAGTAACTTTTAGCAGCTAAATTATTTCAAACTTAGGTGGTGTTAGAGCGAAAAATGGTCT CATACTAAAAGGGAATAAAC
Downstream 100 bases:
>100_bases GCCGCTTAATCGTCTTGTCTAATCGGGTTAAAATGCCTGATAAAAATCCAATGGCAGGCGGACTGGCGATAGCACTGCAA GACGTGTTAATGGAAAAATC
Product: HAD family hydrolase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTSGRNPSINRRPIYILPKNFAEYLCPQQNYYLFLDIDGTLADFTLNPKDSVIPTSTLTLLQKIQSHGVKLAVVTGRSLA EARQMLSPLVLPIAATHGLEIAFDDISDHNETHVVSVDIMELAVIRKSIIQSCIPFDDFTVEDKPYSVALHFRKNPVLAD AAYTIMIETLKTYANWTLKSGKYVWEVVPKGVDKGSAILTLLKRMQSSNNMFPIFIGDDITDEVGFVAVQGENQIIASQP QPLKGMGIKVGSEATHANYYVRNTHEVTILLNSFLSFCQEHSMLAKETVRHVI
Sequences:
>Translated_293_residues MTSGRNPSINRRPIYILPKNFAEYLCPQQNYYLFLDIDGTLADFTLNPKDSVIPTSTLTLLQKIQSHGVKLAVVTGRSLA EARQMLSPLVLPIAATHGLEIAFDDISDHNETHVVSVDIMELAVIRKSIIQSCIPFDDFTVEDKPYSVALHFRKNPVLAD AAYTIMIETLKTYANWTLKSGKYVWEVVPKGVDKGSAILTLLKRMQSSNNMFPIFIGDDITDEVGFVAVQGENQIIASQP QPLKGMGIKVGSEATHANYYVRNTHEVTILLNSFLSFCQEHSMLAKETVRHVI >Mature_292_residues TSGRNPSINRRPIYILPKNFAEYLCPQQNYYLFLDIDGTLADFTLNPKDSVIPTSTLTLLQKIQSHGVKLAVVTGRSLAE ARQMLSPLVLPIAATHGLEIAFDDISDHNETHVVSVDIMELAVIRKSIIQSCIPFDDFTVEDKPYSVALHFRKNPVLADA AYTIMIETLKTYANWTLKSGKYVWEVVPKGVDKGSAILTLLKRMQSSNNMFPIFIGDDITDEVGFVAVQGENQIIASQPQ PLKGMGIKVGSEATHANYYVRNTHEVTILLNSFLSFCQEHSMLAKETVRHVI
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=256, Percent_Identity=30.46875, Blast_Score=110, Evalue=1e-25, Organism=Drosophila melanogaster, GI221473368, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129307, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24582490, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 32683; Mature: 32552
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGRNPSINRRPIYILPKNFAEYLCPQQNYYLFLDIDGTLADFTLNPKDSVIPTSTLTL CCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHH LQKIQSHGVKLAVVTGRSLAEARQMLSPLVLPIAATHGLEIAFDDISDHNETHVVSVDIM HHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEHHH ELAVIRKSIIQSCIPFDDFTVEDKPYSVALHFRKNPVLADAAYTIMIETLKTYANWTLKS HHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCEEECC GKYVWEVVPKGVDKGSAILTLLKRMQSSNNMFPIFIGDDITDEVGFVAVQGENQIIASQP CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCC QPLKGMGIKVGSEATHANYYVRNTHEVTILLNSFLSFCQEHSMLAKETVRHVI CCCCCCCEEECCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSGRNPSINRRPIYILPKNFAEYLCPQQNYYLFLDIDGTLADFTLNPKDSVIPTSTLTL CCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHH LQKIQSHGVKLAVVTGRSLAEARQMLSPLVLPIAATHGLEIAFDDISDHNETHVVSVDIM HHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEHHH ELAVIRKSIIQSCIPFDDFTVEDKPYSVALHFRKNPVLADAAYTIMIETLKTYANWTLKS HHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCEEECC GKYVWEVVPKGVDKGSAILTLLKRMQSSNNMFPIFIGDDITDEVGFVAVQGENQIIASQP CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCC QPLKGMGIKVGSEATHANYYVRNTHEVTILLNSFLSFCQEHSMLAKETVRHVI CCCCCCCEEECCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]