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The map label for this gene is adhB [H]

Identifier: 93006605

GI number: 93006605

Start: 2204464

End: 2205819

Strand: Reverse

Name: adhB [H]

Synonym: Pcryo_1781

Alternate gene names: 93006605

Gene position: 2205819-2204464 (Counterclockwise)

Preceding gene: 93006606

Following gene: 93006604

Centisome position: 72.09

GC content: 46.31

Gene sequence:

>1356_bases
ATGAAACCAAGTTATATGCTGTTATCAGCACTTGCACTTAGTATGGCTTCCAGCGCTGTCATGGCTGATAGTGCAGGCTT
ATCTAATACGACGAGCCTATTCAATATCAGTCCCGCTATCAGCTTACCCAATGTCAGTCCTGCCAATAGTGATTTGGTTA
ATCGCGGTGCCTACATTGCCCGTACTGCTGATTGCATGGCGTGTCATCGCGAGGACTATAGCGGCGGCGTCGCGATTGAA
ACCCCTATTGGTAATATTTACTCGACCAATATCACGCCCTCCACACGTTATGGTATCGGCAACTATACTGAGACTGATTT
CAAAAATGCCTTGAAAAAAGGTCGTGCGCCTACGCAGCAGCTTTATCCTGCGATGCCATATCCGTCTTATCATGGTATGG
CTGATATGGATATCAGTGCACTATTTGCTTACTTTCAAACCGTACCTCCAGTAGAGGAGCCACCTGAAAATACCACTAAG
CTACCATTCCCGTTAAATATCCGAACATTAATGTTGGCTTGGAATGTGATTAACGTGCCTTCTACAGAAAATCGTGCAGG
GCTCACCCAAACCCAGCAACGCGGTGAATACCTCGTTAATAATTTAGAGCATTGCGGCACTTGTCATACCCCACGCAACC
TTACGCAAGGTCTTGATAAGAAAAAATATTTATCTGGTGCGCCGCTTGGTAAATGGTATGCACCTAACATTACCCCAGAT
AATGACAGTGGTATCGGGCGTTGGAGCGAGAATGATATCGTCACTTATCTACGTACTGGCATGCTCGATAAACGCGCTTA
TGCCGGTGGACCTATGGCTGAAGCGGTCGACCATAGTACCCGCTATCTAAGCGATAGCGACTTAATTGCAATGGCGGCTT
ATCTAAAAGTCGTCCCTATCATTAAGACAGACGATTACGTGATACCCGTGGACACGTCACGGCTACCCAGTCCGGTTAGT
CGCTCTATTACCTATGATTTAATTGAGCAAAAAGACTATCTGGCGCAGGAAAAATCCACTACTAATGCTGGTTCTAATAC
TAATAACTCACCAAAAGCGCTATATCTTGCTGCTTGTGCTAGCTGTCACGGAGTAGATGGTTACGCGCAGCCTGATGCTC
GTTACGCCTCTATCGTAGGACTGAGTAGTATTCGTCGCATTAAGCCAGATGCGCTCATCAATGTCATTGCTTATGGCGCG
AAAGGCGCACTAAACACCGCACCCAAAATGCCAGGCTTCTCTAAAGAGTTAAGTCATGCGCAGATTGCCAGTATTACCAA
TTACGTGCGGGTAACTTTCGGTGGTCTACAAAGTAGTGATGTCAGTGCTGCTGACGTCAAACGCATCTTAAAGTAA

Upstream 100 bases:

>100_bases
CTAAACAATAATCTTTTTAGCGTCGATAAATAATAAACGTGTAATAAATTCATGGCTAAAATAATTAAAAATGAGTTTTT
GCCAGCCTAGTGAGGATAGT

Downstream 100 bases:

>100_bases
GTGCTATTAATCCCATTATCGATACAGCTATAAAAATACCTAATGCAACCTGATGATATGGATGACGGTTCAATAATAAG
GATAATAAAATGAATGATGT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MKPSYMLLSALALSMASSAVMADSAGLSNTTSLFNISPAISLPNVSPANSDLVNRGAYIARTADCMACHREDYSGGVAIE
TPIGNIYSTNITPSTRYGIGNYTETDFKNALKKGRAPTQQLYPAMPYPSYHGMADMDISALFAYFQTVPPVEEPPENTTK
LPFPLNIRTLMLAWNVINVPSTENRAGLTQTQQRGEYLVNNLEHCGTCHTPRNLTQGLDKKKYLSGAPLGKWYAPNITPD
NDSGIGRWSENDIVTYLRTGMLDKRAYAGGPMAEAVDHSTRYLSDSDLIAMAAYLKVVPIIKTDDYVIPVDTSRLPSPVS
RSITYDLIEQKDYLAQEKSTTNAGSNTNNSPKALYLAACASCHGVDGYAQPDARYASIVGLSSIRRIKPDALINVIAYGA
KGALNTAPKMPGFSKELSHAQIASITNYVRVTFGGLQSSDVSAADVKRILK

Sequences:

>Translated_451_residues
MKPSYMLLSALALSMASSAVMADSAGLSNTTSLFNISPAISLPNVSPANSDLVNRGAYIARTADCMACHREDYSGGVAIE
TPIGNIYSTNITPSTRYGIGNYTETDFKNALKKGRAPTQQLYPAMPYPSYHGMADMDISALFAYFQTVPPVEEPPENTTK
LPFPLNIRTLMLAWNVINVPSTENRAGLTQTQQRGEYLVNNLEHCGTCHTPRNLTQGLDKKKYLSGAPLGKWYAPNITPD
NDSGIGRWSENDIVTYLRTGMLDKRAYAGGPMAEAVDHSTRYLSDSDLIAMAAYLKVVPIIKTDDYVIPVDTSRLPSPVS
RSITYDLIEQKDYLAQEKSTTNAGSNTNNSPKALYLAACASCHGVDGYAQPDARYASIVGLSSIRRIKPDALINVIAYGA
KGALNTAPKMPGFSKELSHAQIASITNYVRVTFGGLQSSDVSAADVKRILK
>Mature_451_residues
MKPSYMLLSALALSMASSAVMADSAGLSNTTSLFNISPAISLPNVSPANSDLVNRGAYIARTADCMACHREDYSGGVAIE
TPIGNIYSTNITPSTRYGIGNYTETDFKNALKKGRAPTQQLYPAMPYPSYHGMADMDISALFAYFQTVPPVEEPPENTTK
LPFPLNIRTLMLAWNVINVPSTENRAGLTQTQQRGEYLVNNLEHCGTCHTPRNLTQGLDKKKYLSGAPLGKWYAPNITPD
NDSGIGRWSENDIVTYLRTGMLDKRAYAGGPMAEAVDHSTRYLSDSDLIAMAAYLKVVPIIKTDDYVIPVDTSRLPSPVS
RSITYDLIEQKDYLAQEKSTTNAGSNTNNSPKALYLAACASCHGVDGYAQPDARYASIVGLSSIRRIKPDALINVIAYGA
KGALNTAPKMPGFSKELSHAQIASITNYVRVTFGGLQSSDVSAADVKRILK

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 48822; Mature: 48822

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSYMLLSALALSMASSAVMADSAGLSNTTSLFNISPAISLPNVSPANSDLVNRGAYIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCEEE
RTADCMACHREDYSGGVAIETPIGNIYSTNITPSTRYGIGNYTETDFKNALKKGRAPTQQ
EHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
LYPAMPYPSYHGMADMDISALFAYFQTVPPVEEPPENTTKLPFPLNIRTLMLAWNVINVP
HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC
STENRAGLTQTQQRGEYLVNNLEHCGTCHTPRNLTQGLDKKKYLSGAPLGKWYAPNITPD
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC
NDSGIGRWSENDIVTYLRTGMLDKRAYAGGPMAEAVDHSTRYLSDSDLIAMAAYLKVVPI
CCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
IKTDDYVIPVDTSRLPSPVSRSITYDLIEQKDYLAQEKSTTNAGSNTNNSPKALYLAACA
EECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHH
SCHGVDGYAQPDARYASIVGLSSIRRIKPDALINVIAYGAKGALNTAPKMPGFSKELSHA
HHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
QIASITNYVRVTFGGLQSSDVSAADVKRILK
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MKPSYMLLSALALSMASSAVMADSAGLSNTTSLFNISPAISLPNVSPANSDLVNRGAYIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCEEE
RTADCMACHREDYSGGVAIETPIGNIYSTNITPSTRYGIGNYTETDFKNALKKGRAPTQQ
EHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
LYPAMPYPSYHGMADMDISALFAYFQTVPPVEEPPENTTKLPFPLNIRTLMLAWNVINVP
HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC
STENRAGLTQTQQRGEYLVNNLEHCGTCHTPRNLTQGLDKKKYLSGAPLGKWYAPNITPD
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC
NDSGIGRWSENDIVTYLRTGMLDKRAYAGGPMAEAVDHSTRYLSDSDLIAMAAYLKVVPI
CCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
IKTDDYVIPVDTSRLPSPVSRSITYDLIEQKDYLAQEKSTTNAGSNTNNSPKALYLAACA
EECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHH
SCHGVDGYAQPDARYASIVGLSSIRRIKPDALINVIAYGAKGALNTAPKMPGFSKELSHA
HHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
QIASITNYVRVTFGGLQSSDVSAADVKRILK
HHHHHHHEEEEEECCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA