| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yceI [C]
Identifier: 93006606
GI number: 93006606
Start: 2205909
End: 2206523
Strand: Reverse
Name: yceI [C]
Synonym: Pcryo_1782
Alternate gene names: 93006606
Gene position: 2206523-2205909 (Counterclockwise)
Preceding gene: 93006607
Following gene: 93006605
Centisome position: 72.11
GC content: 40.98
Gene sequence:
>615_bases ATGAGCCAGCTTGTATTTGACAAAGTACTATTGCATTACTACAAGCCATTAGGGACGTTATTATTGCTGGTAGGTTGTAC GGTTAGTAGCTTTGCCGCCACCTATAAAATTGAGCCTGACACCTCTAACGTACGTTTCGCTATTGACCACCTCAAAACCT CTGCCACCACTGGCGGCTTCTATAATGTGACGGGAATACTCCAGTATGATCCGAGCGCAAAAACTGGCGACATCTCTCTC ATTATCCCCATAAAATCCTTAAACACAGGCAATAAAAGCTTCACTCTCAAACTGATGGGCTCTGATTTTTTTAATATGGA ACAGTTTCCATTGGCTCATTTTGAATCTACCAAATGGCATTTCACCTCTGACGAAGAAAACCCAAAGGTCACACAAGTGG ATGGCAAGCTAACCTTAAACGGTCAGACCCATCCTATTAGCTTATTGGCGACCAAATTTAGTTGCTATCTGACCGCTCTA GCTAAGAAGAATATCTGCGGAGGCAATTTTACCGCCACTATTGACCGTACTCAGTGGAATATCAAAAAATATGTCTTGTT CGGTATGACTAAAAATCTGACTTTAAATATAAAAGTTGAAGCAGCTAAACAATAA
Upstream 100 bases:
>100_bases AACACAGCACTAATCTTAAAAACTCCTCCAAATAAAACAATGCTAGTAAACGCTTAGAAATCGTGTCATAAGTAAGATCA CACAACAAAGGAATGTTGTC
Downstream 100 bases:
>100_bases TCTTTTTAGCGTCGATAAATAATAAACGTGTAATAAATTCATGGCTAAAATAATTAAAAATGAGTTTTTGCCAGCCTAGT GAGGATAGTATGAAACCAAG
Product: YceI protein
Products: NA
Alternate protein names: Periplasmic Protein; Signal Peptide Protein; YceI-Like Protein; YceI Like Family; Signal Peptide; Ycei Family Protein; Protein YceI
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSQLVFDKVLLHYYKPLGTLLLLVGCTVSSFAATYKIEPDTSNVRFAIDHLKTSATTGGFYNVTGILQYDPSAKTGDISL IIPIKSLNTGNKSFTLKLMGSDFFNMEQFPLAHFESTKWHFTSDEENPKVTQVDGKLTLNGQTHPISLLATKFSCYLTAL AKKNICGGNFTATIDRTQWNIKKYVLFGMTKNLTLNIKVEAAKQ
Sequences:
>Translated_204_residues MSQLVFDKVLLHYYKPLGTLLLLVGCTVSSFAATYKIEPDTSNVRFAIDHLKTSATTGGFYNVTGILQYDPSAKTGDISL IIPIKSLNTGNKSFTLKLMGSDFFNMEQFPLAHFESTKWHFTSDEENPKVTQVDGKLTLNGQTHPISLLATKFSCYLTAL AKKNICGGNFTATIDRTQWNIKKYVLFGMTKNLTLNIKVEAAKQ >Mature_203_residues SQLVFDKVLLHYYKPLGTLLLLVGCTVSSFAATYKIEPDTSNVRFAIDHLKTSATTGGFYNVTGILQYDPSAKTGDISLI IPIKSLNTGNKSFTLKLMGSDFFNMEQFPLAHFESTKWHFTSDEENPKVTQVDGKLTLNGQTHPISLLATKFSCYLTALA KKNICGGNFTATIDRTQWNIKKYVLFGMTKNLTLNIKVEAAKQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22674; Mature: 22543
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLVFDKVLLHYYKPLGTLLLLVGCTVSSFAATYKIEPDTSNVRFAIDHLKTSATTGGF CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCEEEEEEEEECCCCCCCE YNVTGILQYDPSAKTGDISLIIPIKSLNTGNKSFTLKLMGSDFFNMEQFPLAHFESTKWH EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE FTSDEENPKVTQVDGKLTLNGQTHPISLLATKFSCYLTALAKKNICGGNFTATIDRTQWN EECCCCCCEEEEECCEEEECCCCCCEEEEEHHHHHHHEEHHHCCCCCCCEEEEEECCCCC IKKYVLFGMTKNLTLNIKVEAAKQ EEEEEEEEECCCEEEEEEEEEECC >Mature Secondary Structure SQLVFDKVLLHYYKPLGTLLLLVGCTVSSFAATYKIEPDTSNVRFAIDHLKTSATTGGF CHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCEEEEEEEEECCCCCCCE YNVTGILQYDPSAKTGDISLIIPIKSLNTGNKSFTLKLMGSDFFNMEQFPLAHFESTKWH EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE FTSDEENPKVTQVDGKLTLNGQTHPISLLATKFSCYLTALAKKNICGGNFTATIDRTQWN EECCCCCCEEEEECCEEEECCCCCCEEEEEHHHHHHHEEHHHCCCCCCCEEEEEECCCCC IKKYVLFGMTKNLTLNIKVEAAKQ EEEEEEEEECCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA