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The map label for this gene is 93006603

Identifier: 93006603

GI number: 93006603

Start: 2202067

End: 2202711

Strand: Reverse

Name: 93006603

Synonym: Pcryo_1779

Alternate gene names: NA

Gene position: 2202711-2202067 (Counterclockwise)

Preceding gene: 93006604

Following gene: 93006602

Centisome position: 71.99

GC content: 44.65

Gene sequence:

>645_bases
ATGGACATGATCAAACCAAACCTGCTTGCTGTGGTAATGATATTAGGTATCGGAAGCACAGTCGCGCTATCAGGCTGTAG
CCAATCCACTAAAGCCAACGCTGTCACTTTCGCCAGCCAGCAACAAACCACGCAAATGGTCTTTGATAATCAAGCCAGTC
GCAATAATGGTGCATGGGGTGCAGTGTATATGACTAGAGAAGCGCTTAGATCGCCAACAGCCAATATCGTCGATGTCAGC
TCACTACCGAAAATGGTAGAAGATGCTAGCTTGCAAAAGTGGTTAGCAAAGTTCGAAGGTAGCTCTGAAGGTAAAAAGGG
GTTTATTACTACCAATGGTAAAAAGCTGTATGATGATTCCTGCGCTGGCTGTCATATGCAAGATGGTAAGGGCGCAAAGG
GGGCAGGTTACTATCCTCCGCTTGCTGATAACAGTAAGATGCAATCAAAGTACTATATCATTAGTGTTGTGATGAATGGC
TTACGCGGTATGCCATCCTTTCAAAGTATGATGAATGATGAACAAATAGCAGCGGTCACTCAATATGTGCATAGTGACCT
TAATAAATTTACCGATACAGTCACTGCTGCCAACGTTGCTCAGCTCCGTCATGAATTTCCACCGGGTTCTGATCCGAGTG
AATAA

Upstream 100 bases:

>100_bases
GGCATGGATGCCGCTCAGCGACTACATCAAAAGGCAAAAAAACTTGGTTAGTAGAAGTGATTATTACAGTAAATTAATCA
TAATAAATTCAGAGGTAATC

Downstream 100 bases:

>100_bases
TTTTATTTTATGATATCAAATCTTTAGCCACTAACTTGGGAGAGTTTAATCAGTCAGCTCAATGATAATGAACCGTGCTG
TCGATGTCATGGTCATTATT

Product: cytochrome c, class I

Products: NA

Alternate protein names: Gluconate 2-Dehydrogenase; Cytochrome C Family Protein; TdcF Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDMIKPNLLAVVMILGIGSTVALSGCSQSTKANAVTFASQQQTTQMVFDNQASRNNGAWGAVYMTREALRSPTANIVDVS
SLPKMVEDASLQKWLAKFEGSSEGKKGFITTNGKKLYDDSCAGCHMQDGKGAKGAGYYPPLADNSKMQSKYYIISVVMNG
LRGMPSFQSMMNDEQIAAVTQYVHSDLNKFTDTVTAANVAQLRHEFPPGSDPSE

Sequences:

>Translated_214_residues
MDMIKPNLLAVVMILGIGSTVALSGCSQSTKANAVTFASQQQTTQMVFDNQASRNNGAWGAVYMTREALRSPTANIVDVS
SLPKMVEDASLQKWLAKFEGSSEGKKGFITTNGKKLYDDSCAGCHMQDGKGAKGAGYYPPLADNSKMQSKYYIISVVMNG
LRGMPSFQSMMNDEQIAAVTQYVHSDLNKFTDTVTAANVAQLRHEFPPGSDPSE
>Mature_214_residues
MDMIKPNLLAVVMILGIGSTVALSGCSQSTKANAVTFASQQQTTQMVFDNQASRNNGAWGAVYMTREALRSPTANIVDVS
SLPKMVEDASLQKWLAKFEGSSEGKKGFITTNGKKLYDDSCAGCHMQDGKGAKGAGYYPPLADNSKMQSKYYIISVVMNG
LRGMPSFQSMMNDEQIAAVTQYVHSDLNKFTDTVTAANVAQLRHEFPPGSDPSE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23096; Mature: 23096

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMIKPNLLAVVMILGIGSTVALSGCSQSTKANAVTFASQQQTTQMVFDNQASRNNGAWG
CCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCEE
AVYMTREALRSPTANIVDVSSLPKMVEDASLQKWLAKFEGSSEGKKGFITTNGKKLYDDS
HHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEECCCC
CAGCHMQDGKGAKGAGYYPPLADNSKMQSKYYIISVVMNGLRGMPSFQSMMNDEQIAAVT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
QYVHSDLNKFTDTVTAANVAQLRHEFPPGSDPSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDMIKPNLLAVVMILGIGSTVALSGCSQSTKANAVTFASQQQTTQMVFDNQASRNNGAWG
CCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCEE
AVYMTREALRSPTANIVDVSSLPKMVEDASLQKWLAKFEGSSEGKKGFITTNGKKLYDDS
HHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEECCCC
CAGCHMQDGKGAKGAGYYPPLADNSKMQSKYYIISVVMNGLRGMPSFQSMMNDEQIAAVT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
QYVHSDLNKFTDTVTAANVAQLRHEFPPGSDPSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA