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The map label for this gene is blc [H]

Identifier: 93006509

GI number: 93006509

Start: 2074531

End: 2075637

Strand: Reverse

Name: blc [H]

Synonym: Pcryo_1685

Alternate gene names: 93006509

Gene position: 2075637-2074531 (Counterclockwise)

Preceding gene: 93006510

Following gene: 93006508

Centisome position: 67.83

GC content: 40.74

Gene sequence:

>1107_bases
ATGAAAACCAATAAGTTACCGAAGTCAGTATGGTCTGATTCTGAGGCAGCTGGTTCTCAATCACCGCATACTGACCAGCT
ACCTAAGTATAAGATGAATAAAGATCAGGCAACACCAGCAGGTAATATTGACTGTGCCAGTAATGACGCCAGCTATAATA
ATGTAGGTTTTAGTAAAGAATATTTAGAAACTCTGGCACAAGATATGTCACAACAAACCAGCTTTTTTGATTATAAATGT
GTCAAAAAAACTCATGTAAGTGTACTTAACTCTAATTTAATTGATAACAGCACCTTTAACGCCAGTACAGCTGAAGTTGG
TTGTATTAAGACAAGTATCTTCAAAGAATTTGAGCAATCCATAGTCGAGCCACCTCACATCATATCTCCTAAAAACGCAG
CAAGCGTTGCAGAGATACCAGAGCGTATATTTATGAATGGTCTTATTAAGCATACTGGAATAGCCTTAGCTATTATCATA
CCGTTAGCAGCATTTTCTGCTTATGCAGCGACACCGTCTATGACTCAAGCGGTTGCTAGCAAGCACATGACCAATGTAAC
GGCAGAGGTGCTCACGGTTAAACCTAGCAGTATTATTCATAAATCTGCTAGTACACCGACTACGGTAGATAGCGTTGATC
TCAATAAATATGCTGGTGCTTGGTATGAGATCGGTCGTTTGCCGATGTATTTTCAGCGTAACTGTGCCAGCGATGTGACG
GCTAACTATGTTGAAAAAACTGATGGTTCAGGTATCAAAGTTATCAATCAGTGTAAGGCTGAAGATGGCTCGAACATTAT
TGCTGAAGGCTTAGCAAAACCTGCTGATGCGACAGGAAGCAAACTAAAAGTTACCTTTTTGCCATCGTGGATTCGTTGGT
TACCGGTAGGGCGAGCTGACTATTGGGTATTGGCACGTGATCCAGATTATAAAACTGCTCTGGTTGGTACACCTGATAAA
AAGTATTTATGGCTGCTGGCTCGTTCGCCAAACGTAAGCCAAGAAACTTATGCCAAATACCGTCAAATTGCCCAGCAACA
GGGTTATGATTTGAAAGAATTTAAATTAACGTCGCAGAGTAAGCAGACGGTGGATTTGATTCCATAA

Upstream 100 bases:

>100_bases
AATCATTTTGTGCTGCTCTGATAAATAACAATGGTATGAATAAATGCCTATAAGTAGATAGATCGCTCTTAATAATCACT
GTTAATAAAATGGTATCCCT

Downstream 100 bases:

>100_bases
AAGTCTGATAATGGTTTATATTGCCTTTATTTATCATGGCTCTTGTATTTATCATTGTTTAAGTGGATTGATAATAAGGC
AGCATAATATGCTGCCTTTA

Product: Lipocalin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKTNKLPKSVWSDSEAAGSQSPHTDQLPKYKMNKDQATPAGNIDCASNDASYNNVGFSKEYLETLAQDMSQQTSFFDYKC
VKKTHVSVLNSNLIDNSTFNASTAEVGCIKTSIFKEFEQSIVEPPHIISPKNAASVAEIPERIFMNGLIKHTGIALAIII
PLAAFSAYAATPSMTQAVASKHMTNVTAEVLTVKPSSIIHKSASTPTTVDSVDLNKYAGAWYEIGRLPMYFQRNCASDVT
ANYVEKTDGSGIKVINQCKAEDGSNIIAEGLAKPADATGSKLKVTFLPSWIRWLPVGRADYWVLARDPDYKTALVGTPDK
KYLWLLARSPNVSQETYAKYRQIAQQQGYDLKEFKLTSQSKQTVDLIP

Sequences:

>Translated_368_residues
MKTNKLPKSVWSDSEAAGSQSPHTDQLPKYKMNKDQATPAGNIDCASNDASYNNVGFSKEYLETLAQDMSQQTSFFDYKC
VKKTHVSVLNSNLIDNSTFNASTAEVGCIKTSIFKEFEQSIVEPPHIISPKNAASVAEIPERIFMNGLIKHTGIALAIII
PLAAFSAYAATPSMTQAVASKHMTNVTAEVLTVKPSSIIHKSASTPTTVDSVDLNKYAGAWYEIGRLPMYFQRNCASDVT
ANYVEKTDGSGIKVINQCKAEDGSNIIAEGLAKPADATGSKLKVTFLPSWIRWLPVGRADYWVLARDPDYKTALVGTPDK
KYLWLLARSPNVSQETYAKYRQIAQQQGYDLKEFKLTSQSKQTVDLIP
>Mature_368_residues
MKTNKLPKSVWSDSEAAGSQSPHTDQLPKYKMNKDQATPAGNIDCASNDASYNNVGFSKEYLETLAQDMSQQTSFFDYKC
VKKTHVSVLNSNLIDNSTFNASTAEVGCIKTSIFKEFEQSIVEPPHIISPKNAASVAEIPERIFMNGLIKHTGIALAIII
PLAAFSAYAATPSMTQAVASKHMTNVTAEVLTVKPSSIIHKSASTPTTVDSVDLNKYAGAWYEIGRLPMYFQRNCASDVT
ANYVEKTDGSGIKVINQCKAEDGSNIIAEGLAKPADATGSKLKVTFLPSWIRWLPVGRADYWVLARDPDYKTALVGTPDK
KYLWLLARSPNVSQETYAKYRQIAQQQGYDLKEFKLTSQSKQTVDLIP

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=161, Percent_Identity=34.1614906832298, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1790592, Length=168, Percent_Identity=35.1190476190476, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 40441; Mature: 40441

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNKLPKSVWSDSEAAGSQSPHTDQLPKYKMNKDQATPAGNIDCASNDASYNNVGFSKE
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
YLETLAQDMSQQTSFFDYKCVKKTHVSVLNSNLIDNSTFNASTAEVGCIKTSIFKEFEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IVEPPHIISPKNAASVAEIPERIFMNGLIKHTGIALAIIIPLAAFSAYAATPSMTQAVAS
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KHMTNVTAEVLTVKPSSIIHKSASTPTTVDSVDLNKYAGAWYEIGRLPMYFQRNCASDVT
HHHHHCEEEEEEECCHHHHHCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHH
ANYVEKTDGSGIKVINQCKAEDGSNIIAEGLAKPADATGSKLKVTFLPSWIRWLPVGRAD
HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCC
YWVLARDPDYKTALVGTPDKKYLWLLARSPNVSQETYAKYRQIAQQQGYDLKEFKLTSQS
EEEEEECCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC
KQTVDLIP
CCEECCCC
>Mature Secondary Structure
MKTNKLPKSVWSDSEAAGSQSPHTDQLPKYKMNKDQATPAGNIDCASNDASYNNVGFSKE
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
YLETLAQDMSQQTSFFDYKCVKKTHVSVLNSNLIDNSTFNASTAEVGCIKTSIFKEFEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IVEPPHIISPKNAASVAEIPERIFMNGLIKHTGIALAIIIPLAAFSAYAATPSMTQAVAS
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KHMTNVTAEVLTVKPSSIIHKSASTPTTVDSVDLNKYAGAWYEIGRLPMYFQRNCASDVT
HHHHHCEEEEEEECCHHHHHCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHH
ANYVEKTDGSGIKVINQCKAEDGSNIIAEGLAKPADATGSKLKVTFLPSWIRWLPVGRAD
HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCC
YWVLARDPDYKTALVGTPDKKYLWLLARSPNVSQETYAKYRQIAQQQGYDLKEFKLTSQS
EEEEEECCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC
KQTVDLIP
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]