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The map label for this gene is 93006362

Identifier: 93006362

GI number: 93006362

Start: 1887838

End: 1888491

Strand: Reverse

Name: 93006362

Synonym: Pcryo_1536

Alternate gene names: NA

Gene position: 1888491-1887838 (Counterclockwise)

Preceding gene: 93006367

Following gene: 93006360

Centisome position: 61.72

GC content: 42.66

Gene sequence:

>654_bases
ATGACAATGAAGGCGGTCAAGCAAAAGGATGGTATTGAGACCTCTCAACATTTAGCGCCCTTATCAGATATGCGACCTGC
CACCTTGGATAAGATTGAGCAAGCGGTTCGTAAAGTGTTCGCAGGCTTCGACCCTAGTGAAGTAACGATGGCGCAAATTG
CAAAGTCTGCCAACGTTTCATTGCAAACGCTCTATAAATACTTTGGTGACAAGCAAACTTTGTTTAATACCATTATGGAT
ATCGTACTTGGTAGGTTGGCGACGCGGATTATGGATCATTTACAAGGGATTGATAGCGTCAAAGATCGATTGCGCAAGAC
ACTCTGGGTATGTTTTGATTTTGTCGACAGCCATCCAGATGCAGTGATGGTGCTGTCCTCGATATCGGTATCCCGCATTC
GTAGTATTGCTATCTATGAGAATAAAGAGCTGATTGGTGCATTTTTGGATGTATTAGAAGATGGGCAAAAACGAGGGGTA
TTAAACGACAGCGTGCCGCTATATATCCTATTTGATGTTTTTATGGGTTTTATCAGCCGTCTAGGTTTTATGCATATTAT
GCGGCAGACAAATACGCCGATAAACGCAGAATTTGACGCGCTATTTGTGATTTTATGGCGAGCGATATCTAAGCCTGAAA
CAGAGAAAGTGTAA

Upstream 100 bases:

>100_bases
GTTTAAAATAAATGGTAATACATCTTACCTTAGACAAAATTGGCTCATTGAATAAAGTGATTGACTCTAGTCCAAACAGA
TTACAAGGGAGTAAATAGGA

Downstream 100 bases:

>100_bases
TGGTTTATCGCCTAGACCATATTAGAACCTGACTTTCTAACAGCGTCTCCAATCTTAACTTTGATCGTTAGACAGTAATT
CCATTTTGATTAAACAGTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTMKAVKQKDGIETSQHLAPLSDMRPATLDKIEQAVRKVFAGFDPSEVTMAQIAKSANVSLQTLYKYFGDKQTLFNTIMD
IVLGRLATRIMDHLQGIDSVKDRLRKTLWVCFDFVDSHPDAVMVLSSISVSRIRSIAIYENKELIGAFLDVLEDGQKRGV
LNDSVPLYILFDVFMGFISRLGFMHIMRQTNTPINAEFDALFVILWRAISKPETEKV

Sequences:

>Translated_217_residues
MTMKAVKQKDGIETSQHLAPLSDMRPATLDKIEQAVRKVFAGFDPSEVTMAQIAKSANVSLQTLYKYFGDKQTLFNTIMD
IVLGRLATRIMDHLQGIDSVKDRLRKTLWVCFDFVDSHPDAVMVLSSISVSRIRSIAIYENKELIGAFLDVLEDGQKRGV
LNDSVPLYILFDVFMGFISRLGFMHIMRQTNTPINAEFDALFVILWRAISKPETEKV
>Mature_216_residues
TMKAVKQKDGIETSQHLAPLSDMRPATLDKIEQAVRKVFAGFDPSEVTMAQIAKSANVSLQTLYKYFGDKQTLFNTIMDI
VLGRLATRIMDHLQGIDSVKDRLRKTLWVCFDFVDSHPDAVMVLSSISVSRIRSIAIYENKELIGAFLDVLEDGQKRGVL
NDSVPLYILFDVFMGFISRLGFMHIMRQTNTPINAEFDALFVILWRAISKPETEKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24579; Mature: 24448

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKAVKQKDGIETSQHLAPLSDMRPATLDKIEQAVRKVFAGFDPSEVTMAQIAKSANVS
CCCHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
LQTLYKYFGDKQTLFNTIMDIVLGRLATRIMDHLQGIDSVKDRLRKTLWVCFDFVDSHPD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
AVMVLSSISVSRIRSIAIYENKELIGAFLDVLEDGQKRGVLNDSVPLYILFDVFMGFISR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LGFMHIMRQTNTPINAEFDALFVILWRAISKPETEKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TMKAVKQKDGIETSQHLAPLSDMRPATLDKIEQAVRKVFAGFDPSEVTMAQIAKSANVS
CCHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
LQTLYKYFGDKQTLFNTIMDIVLGRLATRIMDHLQGIDSVKDRLRKTLWVCFDFVDSHPD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
AVMVLSSISVSRIRSIAIYENKELIGAFLDVLEDGQKRGVLNDSVPLYILFDVFMGFISR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LGFMHIMRQTNTPINAEFDALFVILWRAISKPETEKV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA