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The map label for this gene is queD [H]

Identifier: 93006323

GI number: 93006323

Start: 1840893

End: 1841492

Strand: Reverse

Name: queD [H]

Synonym: Pcryo_1497

Alternate gene names: 93006323

Gene position: 1841492-1840893 (Counterclockwise)

Preceding gene: 93006324

Following gene: 93006322

Centisome position: 60.18

GC content: 43.83

Gene sequence:

>600_bases
ATGCGTATCCGTAAACTGTTTAAATTTGAAAACGCCCATATTGTGCGTAACTGTAGCTCTGAGCGCTGCAAACACTCGAT
TCATGGTCATAGCTATCAGATTGAGCTGATACTTGAGGCCAAGCGTTTAGATCATGGGCAGATGGTCTATGATTTTGGCT
TATTAAAATCTTCTATTAAAGACATTATCGACAGCTTTGATCATGCGATTTGTTTTTGGAGTAAAGACGATCCTGAATAC
ATCGCTGCCTGTAAGAAATTCAGTGCACGCTGGATCAGCTTGCCGGTATCGCCGTCAGCAGAGCAATTCTCGCGGGTGAT
ATTCTTTTGGGCGCAAGAGATTCTACAACAGACACAAATGCAAAATGGCGAAGCGGATGTGAGCGTATATTCAGTGATTG
CGCACGAAACTGCGACTGGTTACGCGCAGTGTTTTGCTGATGATGTGAGCAATGAGCAAATGGGTAAGTTGGTGCTAAAG
GATTTCGAATTTAGCGAGCAAGTATGTGCAGAGTGGCATGACCCTGAGCTATATGCCAAACTGATACGTGGTGAGAGTTT
CGTTAATCCAGCAGTAACAATGCAAGTACAGGTAGATTGA

Upstream 100 bases:

>100_bases
CGATTTGCTATAATGAGCATCAAGCCGATAAATCGCGGCAAACCTTTATCCTATTATTATTTAGCACAATGATGCTTACT
GTTTTGGTTGATTAATTATT

Downstream 100 bases:

>100_bases
GTTTAATGAATAATAATCAAACGATTGAAGACGCAGCTATAAGTGGTAAGAACTTGCAGACTTTGACGCTGCATTCAGAA
AAAGATACCCAGCGTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: CPH4 synthase; Queuosine biosynthesis protein queD [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRIRKLFKFENAHIVRNCSSERCKHSIHGHSYQIELILEAKRLDHGQMVYDFGLLKSSIKDIIDSFDHAICFWSKDDPEY
IAACKKFSARWISLPVSPSAEQFSRVIFFWAQEILQQTQMQNGEADVSVYSVIAHETATGYAQCFADDVSNEQMGKLVLK
DFEFSEQVCAEWHDPELYAKLIRGESFVNPAVTMQVQVD

Sequences:

>Translated_199_residues
MRIRKLFKFENAHIVRNCSSERCKHSIHGHSYQIELILEAKRLDHGQMVYDFGLLKSSIKDIIDSFDHAICFWSKDDPEY
IAACKKFSARWISLPVSPSAEQFSRVIFFWAQEILQQTQMQNGEADVSVYSVIAHETATGYAQCFADDVSNEQMGKLVLK
DFEFSEQVCAEWHDPELYAKLIRGESFVNPAVTMQVQVD
>Mature_199_residues
MRIRKLFKFENAHIVRNCSSERCKHSIHGHSYQIELILEAKRLDHGQMVYDFGLLKSSIKDIIDSFDHAICFWSKDDPEY
IAACKKFSARWISLPVSPSAEQFSRVIFFWAQEILQQTQMQNGEADVSVYSVIAHETATGYAQCFADDVSNEQMGKLVLK
DFEFSEQVCAEWHDPELYAKLIRGESFVNPAVTMQVQVD

Specific function: Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde [H]

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTPS family. QueD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007115 [H]

Pfam domain/function: PF01242 PTPS [H]

EC number: NA

Molecular weight: Translated: 22921; Mature: 22921

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRKLFKFENAHIVRNCSSERCKHSIHGHSYQIELILEAKRLDHGQMVYDFGLLKSSIK
CCCHHHHHCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
DIIDSFDHAICFWSKDDPEYIAACKKFSARWISLPVSPSAEQFSRVIFFWAQEILQQTQM
HHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QNGEADVSVYSVIAHETATGYAQCFADDVSNEQMGKLVLKDFEFSEQVCAEWHDPELYAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
LIRGESFVNPAVTMQVQVD
HHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRIRKLFKFENAHIVRNCSSERCKHSIHGHSYQIELILEAKRLDHGQMVYDFGLLKSSIK
CCCHHHHHCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
DIIDSFDHAICFWSKDDPEYIAACKKFSARWISLPVSPSAEQFSRVIFFWAQEILQQTQM
HHHHHHCCEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QNGEADVSVYSVIAHETATGYAQCFADDVSNEQMGKLVLKDFEFSEQVCAEWHDPELYAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
LIRGESFVNPAVTMQVQVD
HHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]